RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 B4E1Z4 1266 aa26.69■■□□□ 1.86
SMAD5-207ENST00000511116 BMP1P13497 986 aa26.69■■□□□ 1.86
SMAD5-207ENST00000511116 GDF6Q6KF10 455 aaPredicted RBP26.69■■□□□ 1.86
SMAD5-207ENST00000511116 CHD1LQ86WJ1 897 aa26.69■■□□□ 1.86
SMAD5-207ENST00000511116 CCDC155Q8N6L0 562 aa26.69■■□□□ 1.86
SMAD5-207ENST00000511116 RMDN3Q96TC7 470 aa26.69■■□□□ 1.86
SMAD5-207ENST00000511116 JMJD4Q9H9V9 463 aa26.69■■□□□ 1.86
SMAD5-207ENST00000511116 DDX41Q9UJV9 622 aaKnown RBP26.69■■□□□ 1.86
SMAD5-207ENST00000511116 NOD1Q9Y239 953 aa26.69■■□□□ 1.86
SMAD5-207ENST00000511116 MRPL11Q9Y3B7 192 aaKnown RBP26.69■■□□□ 1.86
SMAD5-207ENST00000511116 NUCB1Q02818 461 aa26.68■■□□□ 1.86
SMAD5-207ENST00000511116 SEPT14Q6ZU15 432 aa26.68■■□□□ 1.86
SMAD5-207ENST00000511116 DHX38Q92620 1227 aaKnown RBP26.68■■□□□ 1.86
SMAD5-207ENST00000511116 RFXAPO00287 272 aa26.67■■□□□ 1.86
SMAD5-207ENST00000511116 OPLAHO14841 1288 aa26.67■■□□□ 1.86
SMAD5-207ENST00000511116 CXCL10P02778 98 aa26.67■■□□□ 1.86
SMAD5-207ENST00000511116 HOXD8P13378 290 aaPredicted RBP26.67■■□□□ 1.86
SMAD5-207ENST00000511116 CASTP20810 708 aaKnown RBP26.67■■□□□ 1.86
SMAD5-207ENST00000511116 CWC27Q6UX04 472 aaKnown RBP26.67■■□□□ 1.86
SMAD5-207ENST00000511116 FBXO11Q86XK2 927 aa26.67■■□□□ 1.86
SMAD5-207ENST00000511116 FTOQ9C0B1 505 aaKnown RBP eCLIP26.67■■□□□ 1.86
SMAD5-207ENST00000511116 GTF2IRD1Q9UHL9 959 aa26.67■■□□□ 1.86
SMAD5-207ENST00000511116 EIF3JO75822 258 aaKnown RBP26.66■■□□□ 1.86
SMAD5-207ENST00000511116 PARNO95453 639 aaKnown RBP26.66■■□□□ 1.86
SMAD5-207ENST00000511116 PARP1P09874 1014 aaKnown RBP26.66■■□□□ 1.86
SMAD5-207ENST00000511116 SELPP16109 830 aa26.66■■□□□ 1.86
SMAD5-207ENST00000511116 HSD17B4P51659 736 aa26.66■■□□□ 1.86
SMAD5-207ENST00000511116 MTMR8Q96EF0 704 aa26.66■■□□□ 1.86
SMAD5-207ENST00000511116 RWDD1Q9H446 243 aaPredicted RBP26.66■■□□□ 1.86
SMAD5-207ENST00000511116 PXMP2Q9NR77 195 aa26.66■■□□□ 1.86
SMAD5-207ENST00000511116 KIF28PB7ZC32 967 aa26.65■■□□□ 1.86
SMAD5-207ENST00000511116 HAS3O00219 553 aa26.65■■□□□ 1.86
SMAD5-207ENST00000511116 HIP1O00291 1037 aa26.65■■□□□ 1.86
SMAD5-207ENST00000511116 GTPBP6O43824 516 aaPredicted RBP26.65■■□□□ 1.86
SMAD5-207ENST00000511116 F2P00734 622 aa26.65■■□□□ 1.86
SMAD5-207ENST00000511116 DGKDQ16760 1214 aa26.65■■□□□ 1.86
SMAD5-207ENST00000511116 DIAPH3Q9NSV4 1193 aa26.65■■□□□ 1.86
SMAD5-207ENST00000511116 NR3C2P08235 984 aa26.64■■□□□ 1.86
SMAD5-207ENST00000511116 WDR5P61964 334 aaKnown RBP26.64■■□□□ 1.86
SMAD5-207ENST00000511116 TFF2Q03403 129 aa26.64■■□□□ 1.86
SMAD5-207ENST00000511116 IMMTQ16891 758 aaKnown RBP26.64■■□□□ 1.86
SMAD5-207ENST00000511116 AAK1Q2M2I8 961 aa26.64■■□□□ 1.86
SMAD5-207ENST00000511116 B4GALNT3Q6L9W6 998 aa26.64■■□□□ 1.86
SMAD5-207ENST00000511116 LRRC8DQ7L1W4 858 aa26.64■■□□□ 1.86
SMAD5-207ENST00000511116 MICALL1Q8N3F8 863 aa26.64■■□□□ 1.86
SMAD5-207ENST00000511116 PPTC7Q8NI37 304 aa26.64■■□□□ 1.86
SMAD5-207ENST00000511116 KRT23Q9C075 422 aa26.64■■□□□ 1.86
SMAD5-207ENST00000511116 CERS4Q9HA82 394 aa26.64■■□□□ 1.86
SMAD5-207ENST00000511116 MAP3K20Q9NYL2 800 aaKnown RBP26.64■■□□□ 1.86
SMAD5-207ENST00000511116 TCF20Q9UGU0 1960 aaKnown RBP26.64■■□□□ 1.85
SMAD5-207ENST00000511116 IGHDP01880 384 aa26.63■■□□□ 1.85
SMAD5-207ENST00000511116 EIF2AK2P19525 551 aaKnown RBP26.63■■□□□ 1.85
SMAD5-207ENST00000511116 COL9A1P20849 921 aa26.63■■□□□ 1.85
SMAD5-207ENST00000511116 LAMC2Q13753 1193 aa26.63■■□□□ 1.85
SMAD5-207ENST00000511116 SEC23AQ15436 765 aa26.63■■□□□ 1.85
SMAD5-207ENST00000511116 TRIM71Q2Q1W2 868 aaKnown RBP26.63■■□□□ 1.85
SMAD5-207ENST00000511116 ARHGEF16Q5VV41 709 aa26.63■■□□□ 1.85
SMAD5-207ENST00000511116 TRAF7Q6Q0C0 670 aa26.63■■□□□ 1.85
SMAD5-207ENST00000511116 IL27Q8NEV9 243 aa26.63■■□□□ 1.85
SMAD5-207ENST00000511116 AMNQ9BXJ7 453 aa26.63■■□□□ 1.85
SMAD5-207ENST00000511116 CNNM2Q9H8M5 875 aa26.63■■□□□ 1.85
SMAD5-207ENST00000511116 HDAC6Q9UBN7 1215 aa26.63■■□□□ 1.85
SMAD5-207ENST00000511116 CTNNA3Q9UI47 895 aa26.63■■□□□ 1.85
SMAD5-207ENST00000511116 BRWD1Q9NSI6 2320 aa26.63■■□□□ 1.85
SMAD5-207ENST00000511116 LPXNO60711 386 aa26.62■■□□□ 1.85
SMAD5-207ENST00000511116 NBNO60934 754 aa26.62■■□□□ 1.85
SMAD5-207ENST00000511116 RGS20O76081 388 aa26.62■■□□□ 1.85
SMAD5-207ENST00000511116 CKBP12277 381 aa26.62■■□□□ 1.85
SMAD5-207ENST00000511116 PSEN2P49810 448 aa26.62■■□□□ 1.85
SMAD5-207ENST00000511116 CNKSR3Q6P9H4 555 aa26.62■■□□□ 1.85
SMAD5-207ENST00000511116 STOX1Q6ZVD7 989 aa26.62■■□□□ 1.85
SMAD5-207ENST00000511116 CHST3Q7LGC8 479 aa26.62■■□□□ 1.85
SMAD5-207ENST00000511116 STAG2Q8N3U4 1231 aa26.62■■□□□ 1.85
SMAD5-207ENST00000511116 ARNTL2Q8WYA1 636 aa26.62■■□□□ 1.85
SMAD5-207ENST00000511116 KATNAL1Q9BW62 490 aa26.62■■□□□ 1.85
SMAD5-207ENST00000511116 COG5Q9UP83 839 aa26.62■■□□□ 1.85
SMAD5-207ENST00000511116 COL4A4P53420 1690 aaPredicted RBP26.61■■□□□ 1.85
SMAD5-207ENST00000511116 TLL1O43897 1013 aa26.61■■□□□ 1.85
SMAD5-207ENST00000511116 PPP1R11O60927 126 aaPredicted RBP26.61■■□□□ 1.85
SMAD5-207ENST00000511116 KCNJ6P48051 423 aa26.61■■□□□ 1.85
SMAD5-207ENST00000511116 KRT40Q6A162 431 aa26.61■■□□□ 1.85
SMAD5-207ENST00000511116 SPRED2Q7Z698 418 aa26.61■■□□□ 1.85
SMAD5-207ENST00000511116 SAMD3Q8N6K7 520 aa26.61■■□□□ 1.85
SMAD5-207ENST00000511116 PDCD2LQ9BRP1 358 aa26.61■■□□□ 1.85
SMAD5-207ENST00000511116 VAT1LQ9HCJ6 419 aa26.61■■□□□ 1.85
SMAD5-207ENST00000511116 MRVI1Q9Y6F6 885 aa26.61■■□□□ 1.85
SMAD5-207ENST00000511116 MYH7BA7E2Y1 1941 aa26.61■■□□□ 1.85
SMAD5-207ENST00000511116 CFBP00751 764 aa26.6■■□□□ 1.85
SMAD5-207ENST00000511116 KCNQ1P51787 676 aa26.6■■□□□ 1.85
SMAD5-207ENST00000511116 CHMP4BP1P59074 171 aa26.6■■□□□ 1.85
SMAD5-207ENST00000511116 PTK7Q13308 1070 aa26.6■■□□□ 1.85
SMAD5-207ENST00000511116 GRB10Q13322 594 aa26.6■■□□□ 1.85
SMAD5-207ENST00000511116 MFSD10Q14728 455 aa26.6■■□□□ 1.85
SMAD5-207ENST00000511116 TCTN1Q2MV58 587 aa26.6■■□□□ 1.85
SMAD5-207ENST00000511116 UBAC1Q9BSL1 405 aa26.6■■□□□ 1.85
SMAD5-207ENST00000511116 ABHD14A-ACY1A0A1B0GW23 586 aa26.59■■□□□ 1.85
SMAD5-207ENST00000511116 LCHNA4D1U4 455 aa26.59■■□□□ 1.85
SMAD5-207ENST00000511116 DHX16O60231 1041 aaKnown RBP26.59■■□□□ 1.85
SMAD5-207ENST00000511116 DEFB103AP81534 67 aa26.59■■□□□ 1.85
SMAD5-207ENST00000511116 KIAA0753Q2KHM9 967 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms