RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 MMS22LQ6ZRQ5 1243 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 ERMNQ8TAM6 284 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 AKAP12Q02952 1782 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 SRGNP10124 158 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 E2F5Q15329 346 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 ARHGAP44Q17R89 818 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 TRAPPC3LQ5T215 181 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 EMBQ6PCB8 327 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 MED15Q96RN5 788 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 UTP11Q9Y3A2 253 aaKnown RBP16.38■□□□□ 0.21
USP38-202ENST00000510377 FAM237AA0A1B0GTK4 181 aa16.37■□□□□ 0.21
USP38-202ENST00000510377 WTIPA6NIX2 430 aaPredicted RBP16.37■□□□□ 0.21
USP38-202ENST00000510377 UBE2SQ16763 222 aa16.37■□□□□ 0.21
USP38-202ENST00000510377 MGARPQ8TDB4 240 aa16.37■□□□□ 0.21
USP38-202ENST00000510377 TRIM9Q9C026 710 aa16.37■□□□□ 0.21
USP38-202ENST00000510377 KCNK9Q9NPC2 374 aa16.37■□□□□ 0.21
USP38-202ENST00000510377 AFF2P51816 1311 aa16.37■□□□□ 0.21
USP38-202ENST00000510377 CNTNAP5Q8WYK1 1306 aa16.37■□□□□ 0.21
USP38-202ENST00000510377 ERVV-1B6SEH8 477 aa16.37■□□□□ 0.21
USP38-202ENST00000510377 NAA25Q14CX7 972 aa16.37■□□□□ 0.21
USP38-202ENST00000510377 RBM12Q9NTZ6 932 aaKnown RBP16.37■□□□□ 0.21
USP38-202ENST00000510377 PIK3C2AO00443 1686 aa16.37■□□□□ 0.21
USP38-202ENST00000510377 OVOS2A0A0G2JMS6 1433 aa16.37■□□□□ 0.21
USP38-202ENST00000510377 UFL1O94874 794 aa16.37■□□□□ 0.21
USP38-202ENST00000510377 MAEAQ7L5Y9 396 aa16.37■□□□□ 0.21
USP38-202ENST00000510377 ELOA2Q8IYF1 753 aaPredicted RBP16.37■□□□□ 0.21
USP38-202ENST00000510377 SEPT12Q8IYM1 358 aa16.37■□□□□ 0.21
USP38-202ENST00000510377 ANKS4BQ8N8V4 417 aa16.37■□□□□ 0.21
USP38-202ENST00000510377 FRMD3A2A2Y4 597 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 FKBP3Q00688 224 aaKnown RBP16.36■□□□□ 0.21
USP38-202ENST00000510377 CYP4A11Q02928 519 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 PLAAQ9Y263 795 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 CTDP1Q9Y5B0 961 aaPredicted RBP16.36■□□□□ 0.21
USP38-202ENST00000510377 FAM13AO94988 1023 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 SLC16A2P36021 539 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 ARL8AQ96BM9 186 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 C1orf167Q5SNV9 1468 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 A6NNZ2 444 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 FLOT1O75955 427 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 GCNT3O95395 438 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 PCP11498 1178 aaKnown RBP16.36■□□□□ 0.21
USP38-202ENST00000510377 GJC1P36383 396 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 IFNAR2P48551 515 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 CARSP49589 748 aaKnown RBP16.36■□□□□ 0.21
USP38-202ENST00000510377 RCAN1P53805 252 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 KCTD19Q17RG1 926 aaPredicted RBP16.36■□□□□ 0.21
USP38-202ENST00000510377 TUBB8Q3ZCM7 444 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 WDR66Q8TBY9 1149 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 DDX12PQ92771 950 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 ZNF512BQ96KM6 892 aaPredicted RBP16.36■□□□□ 0.21
USP38-202ENST00000510377 TAOK3Q9H2K8 898 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 CUEDC2Q9H467 287 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 GOLPH3Q9H4A6 298 aa16.36■□□□□ 0.21
USP38-202ENST00000510377 ARMCX3Q9UH62 379 aaPredicted RBP16.36■□□□□ 0.21
USP38-202ENST00000510377 CORO7P57737 925 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 SEC23AQ15436 765 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 ALS2CLQ60I27 953 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 WDR93Q6P2C0 686 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 PDXDC2PQ6P474 469 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 GJA10Q969M2 543 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 MYCBPQ99417 103 aaPredicted RBP16.35■□□□□ 0.21
USP38-202ENST00000510377 TMEM47Q9BQJ4 181 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 VIPAS39Q9H9C1 493 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 NOVA2Q9UNW9 492 aaKnown RBP16.35■□□□□ 0.21
USP38-202ENST00000510377 ATP8A1Q9Y2Q0 1164 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 COL4A3BPQ9Y5P4 624 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 EPB41P11171 864 aaKnown RBP16.35■□□□□ 0.21
USP38-202ENST00000510377 SEC24CP53992 1094 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 SLF2Q8IX21 1173 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 CACNA2D3Q8IZS8 1091 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 AK8Q96MA6 479 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 PKD2L1Q9P0L9 805 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 SAMD15Q9P1V8 674 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 MINPP1Q9UNW1 487 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 ZNF804BA4D1E1 1349 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 TARSL2A2RTX5 802 aaKnown RBP16.35■□□□□ 0.21
USP38-202ENST00000510377 MEIS1O00470 390 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 BUB1BO60566 1050 aaPredicted RBP16.35■□□□□ 0.21
USP38-202ENST00000510377 KIF4AO95239 1232 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 APBA1Q02410 837 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 SEPT7Q16181 437 aaKnown RBP16.35■□□□□ 0.21
USP38-202ENST00000510377 USH1GQ495M9 461 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 SH3RF3Q8TEJ3 882 aaPredicted RBP16.35■□□□□ 0.21
USP38-202ENST00000510377 DDX25Q9UHL0 483 aaKnown RBP16.35■□□□□ 0.21
USP38-202ENST00000510377 PCDHA6Q9UN73 950 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 PCDHA8Q9Y5H6 950 aa16.35■□□□□ 0.21
USP38-202ENST00000510377 NR2F2P24468 414 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 EVX2Q03828 476 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 FAM84BQ96KN1 310 aaPredicted RBP16.34■□□□□ 0.21
USP38-202ENST00000510377 LZTS2Q9BRK4 669 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 FAM205AQ6ZU69 1335 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 SPDYE3A6NKU9 549 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 PDE2AO00408 941 aaPredicted RBP16.34■□□□□ 0.21
USP38-202ENST00000510377 MYBL2P10244 700 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 BTDP43251 543 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 PABPC4Q13310 644 aaKnown RBP eCLIP16.34■□□□□ 0.21
USP38-202ENST00000510377 MCTP2Q6DN12 878 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 XRCC5P13010 732 aaKnown RBP16.34■□□□□ 0.21
USP38-202ENST00000510377 TNFAIP3P21580 790 aa16.34■□□□□ 0.21
USP38-202ENST00000510377 PACS2Q86VP3 889 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms