RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 TMEM67Q5HYA8 995 aa15.67■□□□□ 0.1
DDX41-210ENST00000509576 GPATCH4Q5T3I0 446 aaKnown RBP15.67■□□□□ 0.1
DDX41-210ENST00000509576 CWC27Q6UX04 472 aaKnown RBP15.67■□□□□ 0.1
DDX41-210ENST00000509576 SESTD1Q86VW0 696 aa15.67■□□□□ 0.1
DDX41-210ENST00000509576 IL31RAQ8NI17 732 aa15.67■□□□□ 0.1
DDX41-210ENST00000509576 ESR2Q92731 530 aa15.67■□□□□ 0.1
DDX41-210ENST00000509576 GPKOWQ92917 476 aaPredicted RBP eCLIP15.67■□□□□ 0.1
DDX41-210ENST00000509576 OSBPL3Q9H4L5 887 aa15.67■□□□□ 0.1
DDX41-210ENST00000509576 BCAS3Q9H6U6 928 aa15.67■□□□□ 0.1
DDX41-210ENST00000509576 DDX41Q9UJV9 622 aaKnown RBP15.67■□□□□ 0.1
DDX41-210ENST00000509576 TAF6LQ9Y6J9 622 aa15.67■□□□□ 0.1
DDX41-210ENST00000509576 HAS3O00219 553 aa15.66■□□□□ 0.1
DDX41-210ENST00000509576 PCP11498 1178 aaKnown RBP15.66■□□□□ 0.1
DDX41-210ENST00000509576 CHMP4BP1P59074 171 aa15.66■□□□□ 0.1
DDX41-210ENST00000509576 WDR5P61964 334 aaKnown RBP15.66■□□□□ 0.1
DDX41-210ENST00000509576 RBL2Q08999 1139 aa15.66■□□□□ 0.1
DDX41-210ENST00000509576 PTGISQ16647 500 aa15.66■□□□□ 0.1
DDX41-210ENST00000509576 CYB5R4Q7L1T6 521 aa15.66■□□□□ 0.1
DDX41-210ENST00000509576 CHST3Q7LGC8 479 aa15.66■□□□□ 0.1
DDX41-210ENST00000509576 TICAM2Q86XR7 235 aa15.66■□□□□ 0.1
DDX41-210ENST00000509576 KHSRPQ92945 711 aaKnown RBP eCLIP15.66■□□□□ 0.1
DDX41-210ENST00000509576 MTMR8Q96EF0 704 aa15.66■□□□□ 0.1
DDX41-210ENST00000509576 ZFP91Q96JP5 570 aaPredicted RBP15.66■□□□□ 0.1
DDX41-210ENST00000509576 ZSCAN10Q96SZ4 725 aaPredicted RBP15.66■□□□□ 0.1
DDX41-210ENST00000509576 SLC9A7Q96T83 725 aa15.66■□□□□ 0.1
DDX41-210ENST00000509576 SENP2Q9HC62 589 aa15.66■□□□□ 0.1
DDX41-210ENST00000509576 GPHNQ9NQX3 736 aaPredicted RBP15.66■□□□□ 0.1
DDX41-210ENST00000509576 HDAC6Q9UBN7 1215 aa15.66■□□□□ 0.1
DDX41-210ENST00000509576 ABCB11O95342 1321 aa15.66■□□□□ 0.1
DDX41-210ENST00000509576 ZNF286BP0CG31 522 aa15.65■□□□□ 0.1
DDX41-210ENST00000509576 EIF2AK2P19525 551 aaKnown RBP15.65■□□□□ 0.1
DDX41-210ENST00000509576 RFC2P35250 354 aa15.65■□□□□ 0.1
DDX41-210ENST00000509576 SP2Q02086 613 aa15.65■□□□□ 0.1
DDX41-210ENST00000509576 GHRHRQ02643 423 aa15.65■□□□□ 0.1
DDX41-210ENST00000509576 NUCB1Q02818 461 aa15.65■□□□□ 0.1
DDX41-210ENST00000509576 GRB10Q13322 594 aa15.65■□□□□ 0.1
DDX41-210ENST00000509576 MKRN4PQ13434 485 aaPredicted RBP15.65■□□□□ 0.1
DDX41-210ENST00000509576 SEC23AQ15436 765 aa15.65■□□□□ 0.1
DDX41-210ENST00000509576 CHD1LQ86WJ1 897 aa15.65■□□□□ 0.1
DDX41-210ENST00000509576 ARNTL2Q8WYA1 636 aa15.65■□□□□ 0.1
DDX41-210ENST00000509576 RMDN3Q96TC7 470 aa15.65■□□□□ 0.1
DDX41-210ENST00000509576 PXMP2Q9NR77 195 aa15.65■□□□□ 0.1
DDX41-210ENST00000509576 GTF2IRD1Q9UHL9 959 aa15.65■□□□□ 0.1
DDX41-210ENST00000509576 TELO2Q9Y4R8 837 aa15.65■□□□□ 0.1
DDX41-210ENST00000509576 MYO7AQ13402 2215 aa15.65■□□□□ 0.1
DDX41-210ENST00000509576 ZNF213O14771 459 aa15.64■□□□□ 0.09
DDX41-210ENST00000509576 SORBS3O60504 671 aa15.64■□□□□ 0.09
DDX41-210ENST00000509576 KPNA6O60684 536 aa15.64■□□□□ 0.09
DDX41-210ENST00000509576 GH1P01241 217 aa15.64■□□□□ 0.09
DDX41-210ENST00000509576 CXCL10P02778 98 aa15.64■□□□□ 0.09
DDX41-210ENST00000509576 CKBP12277 381 aa15.64■□□□□ 0.09
DDX41-210ENST00000509576 HOXD8P13378 290 aaPredicted RBP15.64■□□□□ 0.09
DDX41-210ENST00000509576 HSD17B4P51659 736 aa15.64■□□□□ 0.09
DDX41-210ENST00000509576 PHOSPHO2Q8TCD6 241 aa15.64■□□□□ 0.09
DDX41-210ENST00000509576 RNF41Q9H4P4 317 aaPredicted RBP15.64■□□□□ 0.09
DDX41-210ENST00000509576 VAT1LQ9HCJ6 419 aa15.64■□□□□ 0.09
DDX41-210ENST00000509576 C5orf42Q9H799 3197 aa15.64■□□□□ 0.09
DDX41-210ENST00000509576 F2P00734 622 aa15.63■□□□□ 0.09
DDX41-210ENST00000509576 PDE4AP27815 886 aa15.63■□□□□ 0.09
DDX41-210ENST00000509576 PSEN2P49810 448 aa15.63■□□□□ 0.09
DDX41-210ENST00000509576 COL9A3Q14050 684 aaPredicted RBP15.63■□□□□ 0.09
DDX41-210ENST00000509576 ASPRV1Q53RT3 343 aa15.63■□□□□ 0.09
DDX41-210ENST00000509576 LRRC8DQ7L1W4 858 aa15.63■□□□□ 0.09
DDX41-210ENST00000509576 NSUN6Q8TEA1 469 aaKnown RBP15.63■□□□□ 0.09
DDX41-210ENST00000509576 GDPD5Q8WTR4 605 aa15.63■□□□□ 0.09
DDX41-210ENST00000509576 EMID1Q96A84 441 aaPredicted RBP15.63■□□□□ 0.09
DDX41-210ENST00000509576 FTOQ9C0B1 505 aaKnown RBP eCLIP15.63■□□□□ 0.09
DDX41-210ENST00000509576 MAD2L2Q9UI95 211 aa15.63■□□□□ 0.09
DDX41-210ENST00000509576 RAD50Q92878 1312 aa15.63■□□□□ 0.09
DDX41-210ENST00000509576 CYTH3O43739 400 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 TLL1O43897 1013 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 NR3C2P08235 984 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 SELPP16109 830 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 HOXA13P31271 388 aaPredicted RBP15.62■□□□□ 0.09
DDX41-210ENST00000509576 BFSP2Q13515 415 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 STXBP2Q15833 593 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 HSDL1Q3SXM5 330 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 ZNF618Q5T7W0 954 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 FBXO11Q86XK2 927 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 EXOC6Q8TAG9 804 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 AFAP1L1Q8TED9 768 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 PDCD2LQ9BRP1 358 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 ALG1Q9BT22 464 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 DSCC1Q9BVC3 393 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 KAT14Q9H8E8 782 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 CD320Q9NPF0 282 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 PNMA2Q9UL42 364 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 LOXHD1Q8IVV2 1947 aa15.62■□□□□ 0.09
DDX41-210ENST00000509576 COL4A6Q14031 1691 aa15.61■□□□□ 0.09
DDX41-210ENST00000509576 BAIAP3O94812 1187 aa15.61■□□□□ 0.09
DDX41-210ENST00000509576 CFBP00751 764 aa15.61■□□□□ 0.09
DDX41-210ENST00000509576 PARP1P09874 1014 aaKnown RBP15.61■□□□□ 0.09
DDX41-210ENST00000509576 ACTN1P12814 892 aa15.61■□□□□ 0.09
DDX41-210ENST00000509576 GSPT1P15170 499 aaKnown RBP15.61■□□□□ 0.09
DDX41-210ENST00000509576 MFSD10Q14728 455 aa15.61■□□□□ 0.09
DDX41-210ENST00000509576 MYSM1Q5VVJ2 828 aa15.61■□□□□ 0.09
DDX41-210ENST00000509576 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.61■□□□□ 0.09
DDX41-210ENST00000509576 RETREG2Q8NC44 543 aa15.61■□□□□ 0.09
DDX41-210ENST00000509576 CAGE1Q8TC20 777 aa15.61■□□□□ 0.09
DDX41-210ENST00000509576 IWS1Q96ST2 819 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms