RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 TEX2Q8IWB9 1127 aa11.84□□□□□ -0.51
PTPN20-220ENST00000508715 CYP2W1Q8TAV3 490 aa11.84□□□□□ -0.51
PTPN20-220ENST00000508715 LENG1Q96BZ8 264 aaPredicted RBP11.84□□□□□ -0.51
PTPN20-220ENST00000508715 C8orf76Q96K31 380 aa11.84□□□□□ -0.51
PTPN20-220ENST00000508715 IWS1Q96ST2 819 aa11.84□□□□□ -0.51
PTPN20-220ENST00000508715 BCAS3Q9H6U6 928 aa11.84□□□□□ -0.51
PTPN20-220ENST00000508715 PAK6Q9NQU5 681 aaPredicted RBP11.84□□□□□ -0.51
PTPN20-220ENST00000508715 SMC3Q9UQE7 1217 aa11.84□□□□□ -0.51
PTPN20-220ENST00000508715 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.84□□□□□ -0.51
PTPN20-220ENST00000508715 FOSP01100 380 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-220ENST00000508715 MYCLP12524 364 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-220ENST00000508715 CCL5P13501 91 aa11.83□□□□□ -0.52
PTPN20-220ENST00000508715 ITGB5P18084 799 aa11.83□□□□□ -0.52
PTPN20-220ENST00000508715 CCDC144BQ3MJ40 725 aa11.83□□□□□ -0.52
PTPN20-220ENST00000508715 GJC2Q5T442 439 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-220ENST00000508715 PCNX4Q63HM2 1172 aa11.83□□□□□ -0.52
PTPN20-220ENST00000508715 LHX8Q68G74 356 aa11.83□□□□□ -0.52
PTPN20-220ENST00000508715 GALNT17Q6IS24 598 aa11.83□□□□□ -0.52
PTPN20-220ENST00000508715 CCDC62Q6P9F0 684 aa11.83□□□□□ -0.52
PTPN20-220ENST00000508715 DIS3L2Q8IYB7 885 aaKnown RBP11.83□□□□□ -0.52
PTPN20-220ENST00000508715 SPRYD3Q8NCJ5 442 aa11.83□□□□□ -0.52
PTPN20-220ENST00000508715 INPP4AQ96PE3 977 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-220ENST00000508715 GLT8D2Q9H1C3 349 aa11.83□□□□□ -0.52
PTPN20-220ENST00000508715 ABHD16BQ9H3Z7 469 aa11.83□□□□□ -0.52
PTPN20-220ENST00000508715 RTEL1Q9NZ71 1219 aa11.83□□□□□ -0.52
PTPN20-220ENST00000508715 UBIAD1Q9Y5Z9 338 aa11.83□□□□□ -0.52
PTPN20-220ENST00000508715 IGLV3-22A0A075B6J6 115 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 SPDYE3A6NKU9 549 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 FAM86B1E9PN63 330 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 CTAGE5O15320 804 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 CYP3A4P08684 503 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 FAM86B2P0C5J1 330 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 SMPD1P17405 629 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 ADCYAP1R1P41586 468 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 ARHGAP4P98171 946 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 SP2Q02086 613 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 PDE4DQ08499 809 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 STXBP2Q15833 593 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 ANO1Q5XXA6 986 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 FAM184AQ8NB25 1140 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 BICD2Q8TD16 824 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 TBCKQ8TEA7 893 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 COPS5Q92905 334 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 LENG9Q96B70 501 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 ABHD8Q96I13 439 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTPN20-220ENST00000508715 VTA1Q9NP79 307 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 NRBP1Q9UHY1 535 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 ZHX1Q9UKY1 873 aaPredicted RBP11.82□□□□□ -0.52
PTPN20-220ENST00000508715 GNEQ9Y223 722 aaKnown RBP11.82□□□□□ -0.52
PTPN20-220ENST00000508715 TELO2Q9Y4R8 837 aa11.82□□□□□ -0.52
PTPN20-220ENST00000508715 SEPT4O43236 478 aa11.81□□□□□ -0.52
PTPN20-220ENST00000508715 EIF3JO75822 258 aaKnown RBP11.81□□□□□ -0.52
PTPN20-220ENST00000508715 XBP1P17861 261 aa11.81□□□□□ -0.52
PTPN20-220ENST00000508715 SYT1P21579 422 aa11.81□□□□□ -0.52
PTPN20-220ENST00000508715 U2AF2P26368 475 aaKnown RBP eCLIP11.81□□□□□ -0.52
PTPN20-220ENST00000508715 CCND2P30279 289 aa11.81□□□□□ -0.52
PTPN20-220ENST00000508715 CIITAP33076 1130 aa11.81□□□□□ -0.52
PTPN20-220ENST00000508715 KRT2P35908 639 aa11.81□□□□□ -0.52
PTPN20-220ENST00000508715 MNX1P50219 401 aaPredicted RBP11.81□□□□□ -0.52
PTPN20-220ENST00000508715 INF2Q27J81 1249 aa11.81□□□□□ -0.52
PTPN20-220ENST00000508715 SEPT14Q6ZU15 432 aa11.81□□□□□ -0.52
PTPN20-220ENST00000508715 PIK3AP1Q6ZUJ8 805 aa11.81□□□□□ -0.52
PTPN20-220ENST00000508715 MBOAT7Q96N66 472 aa11.81□□□□□ -0.52
PTPN20-220ENST00000508715 WDR11Q9BZH6 1224 aa11.81□□□□□ -0.52
PTPN20-220ENST00000508715 HMX1Q9NP08 348 aaPredicted RBP11.81□□□□□ -0.52
PTPN20-220ENST00000508715 DDX41Q9UJV9 622 aaKnown RBP11.81□□□□□ -0.52
PTPN20-220ENST00000508715 CNPY2Q9Y2B0 182 aa11.81□□□□□ -0.52
PTPN20-220ENST00000508715 ALPK3Q96L96 1907 aa11.81□□□□□ -0.52
PTPN20-220ENST00000508715 MYH9P35579 1960 aaKnown RBP11.8□□□□□ -0.52
PTPN20-220ENST00000508715 TRIP12Q14669 1992 aaPredicted RBP11.8□□□□□ -0.52
PTPN20-220ENST00000508715 MYADML2A6NDP7 307 aa11.8□□□□□ -0.52
PTPN20-220ENST00000508715 SPATA31C2B4DYI2 1134 aa11.8□□□□□ -0.52
PTPN20-220ENST00000508715 MEIS1O00470 390 aa11.8□□□□□ -0.52
PTPN20-220ENST00000508715 ATP9AO75110 1047 aa11.8□□□□□ -0.52
PTPN20-220ENST00000508715 TDP2O95551 362 aa11.8□□□□□ -0.52
PTPN20-220ENST00000508715 ARP10275 920 aa11.8□□□□□ -0.52
PTPN20-220ENST00000508715 ICAM3P32942 547 aa11.8□□□□□ -0.52
PTPN20-220ENST00000508715 TOB1P50616 345 aaPredicted RBP11.8□□□□□ -0.52
PTPN20-220ENST00000508715 PKP1Q13835 747 aa11.8□□□□□ -0.52
PTPN20-220ENST00000508715 LY6KQ17RY6 165 aa11.8□□□□□ -0.52
PTPN20-220ENST00000508715 LARP1BQ659C4 914 aaKnown RBP11.8□□□□□ -0.52
PTPN20-220ENST00000508715 MXRA8Q9BRK3 442 aa11.8□□□□□ -0.52
PTPN20-220ENST00000508715 RNF208Q9H0X6 261 aa11.8□□□□□ -0.52
PTPN20-220ENST00000508715 DDX20Q9UHI6 824 aaKnown RBP11.8□□□□□ -0.52
PTPN20-220ENST00000508715 MTMR6Q9Y217 621 aa11.8□□□□□ -0.52
PTPN20-220ENST00000508715 SCN10AQ9Y5Y9 1956 aa11.79□□□□□ -0.52
PTPN20-220ENST00000508715 CYP3A7-CYP3A51PA0A087WV96 503 aa11.79□□□□□ -0.52
PTPN20-220ENST00000508715 ADAMTS4O75173 837 aa11.79□□□□□ -0.52
PTPN20-220ENST00000508715 GJB1P08034 283 aa11.79□□□□□ -0.52
PTPN20-220ENST00000508715 AKR1A1P14550 325 aa11.79□□□□□ -0.52
PTPN20-220ENST00000508715 CYP3A7P24462 503 aa11.79□□□□□ -0.52
PTPN20-220ENST00000508715 CNGA1P29973 690 aa11.79□□□□□ -0.52
PTPN20-220ENST00000508715 USP11P51784 963 aa11.79□□□□□ -0.52
PTPN20-220ENST00000508715 NONOQ15233 471 aaKnown RBP eCLIP11.79□□□□□ -0.52
PTPN20-220ENST00000508715 DUSP28Q4G0W2 176 aa11.79□□□□□ -0.52
PTPN20-220ENST00000508715 CEP55Q53EZ4 464 aa11.79□□□□□ -0.52
PTPN20-220ENST00000508715 MCTP2Q6DN12 878 aa11.79□□□□□ -0.52
PTPN20-220ENST00000508715 IQSEC1Q6DN90 963 aa11.79□□□□□ -0.52
PTPN20-220ENST00000508715 XRRA1Q6P2D8 792 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms