RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-210ENST00000507965 COL11A1P12107 1806 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-210ENST00000507965 KIAA1324LA8MWY0 1029 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-210ENST00000507965 SOX1O00570 391 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-210ENST00000507965 SRGAP3O43295 1099 aa6.83□□□□□ -1.32
ATXN3-210ENST00000507965 PEX10O60683 326 aa6.83□□□□□ -1.32
ATXN3-210ENST00000507965 MED26O95402 600 aa6.83□□□□□ -1.32
ATXN3-210ENST00000507965 TGFB1P01137 390 aa6.83□□□□□ -1.32
ATXN3-210ENST00000507965 GHRHP01286 108 aa6.83□□□□□ -1.32
ATXN3-210ENST00000507965 HOXD10P28358 340 aa6.83□□□□□ -1.32
ATXN3-210ENST00000507965 FASTKD5Q7L8L6 764 aaKnown RBP6.83□□□□□ -1.32
ATXN3-210ENST00000507965 MAP4K3Q8IVH8 894 aa6.83□□□□□ -1.32
ATXN3-210ENST00000507965 AGGF1Q8N302 714 aaeCLIP6.83□□□□□ -1.32
ATXN3-210ENST00000507965 ZGPATQ8N5A5 531 aaKnown RBP6.83□□□□□ -1.32
ATXN3-210ENST00000507965 NSUN4Q96CB9 384 aaKnown RBP6.83□□□□□ -1.32
ATXN3-210ENST00000507965 DEFB118Q96PH6 123 aa6.83□□□□□ -1.32
ATXN3-210ENST00000507965 API5Q9BZZ5 524 aaKnown RBP6.83□□□□□ -1.32
ATXN3-210ENST00000507965 OSBPL5Q9H0X9 879 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-210ENST00000507965 RBSNQ9H1K0 784 aa6.83□□□□□ -1.32
ATXN3-210ENST00000507965 TLR7Q9NYK1 1049 aaKnown RBP6.83□□□□□ -1.32
ATXN3-210ENST00000507965 SLC45A1Q9Y2W3 748 aa6.83□□□□□ -1.32
ATXN3-210ENST00000507965 MYH7P12883 1935 aa6.83□□□□□ -1.32
ATXN3-210ENST00000507965 RLFQ13129 1914 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 GPR75-ASB3A0A0A6YYF3 556 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 PNMA6EA0A0J9YXQ4 647 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 J3QW42 95 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 CTNND1O60716 968 aaKnown RBP6.82□□□□□ -1.32
ATXN3-210ENST00000507965 MICAL2O94851 1124 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 SGPL1O95470 568 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 MCAMP43121 646 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 RARSP54136 660 aaKnown RBP6.82□□□□□ -1.32
ATXN3-210ENST00000507965 HMGCS2P54868 508 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 JAG1P78504 1218 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 SPP2Q13103 211 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 MVPQ14764 893 aaKnown RBP6.82□□□□□ -1.32
ATXN3-210ENST00000507965 Q6ZS46 218 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 ADGRA1Q86SQ6 560 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 SPATA5Q8NB90 893 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 SH3RF3Q8TEJ3 882 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-210ENST00000507965 CALR3Q96L12 384 aaKnown RBP6.82□□□□□ -1.32
ATXN3-210ENST00000507965 NEUROD6Q96NK8 337 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 HTATIP2Q9BUP3 242 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.82□□□□□ -1.321e-11■■■■□ 25.2
ATXN3-210ENST00000507965 DNAJC18Q9H819 358 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.82□□□□□ -1.32
ATXN3-210ENST00000507965 PAK6Q9NQU5 681 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-210ENST00000507965 ZNF236Q9UL36 1845 aa6.82□□□□□ -1.32
ATXN3-210ENST00000507965 BAZ2AQ9UIF9 1905 aaKnown RBP6.82□□□□□ -1.32
ATXN3-210ENST00000507965 RANBP2P49792 3224 aaKnown RBP6.81□□□□□ -1.32
ATXN3-210ENST00000507965 DHX15O43143 795 aaKnown RBP6.81□□□□□ -1.32
ATXN3-210ENST00000507965 LGR5O75473 907 aa6.81□□□□□ -1.32
ATXN3-210ENST00000507965 PSAPP07602 524 aa6.81□□□□□ -1.32
ATXN3-210ENST00000507965 TRIM27P14373 513 aa6.81□□□□□ -1.32
ATXN3-210ENST00000507965 IGFBP4P22692 258 aa6.81□□□□□ -1.32
ATXN3-210ENST00000507965 GRIK1P39086 918 aa6.81□□□□□ -1.32
ATXN3-210ENST00000507965 MTX1Q13505 466 aa6.81□□□□□ -1.32
ATXN3-210ENST00000507965 FAM110CQ1W6H9 321 aa6.81□□□□□ -1.32
ATXN3-210ENST00000507965 SPTY2D1Q68D10 685 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-210ENST00000507965 TEX11Q8IYF3 940 aa6.81□□□□□ -1.32
ATXN3-210ENST00000507965 TRIB2Q92519 343 aa6.81□□□□□ -1.32
ATXN3-210ENST00000507965 PAWRQ96IZ0 340 aaKnown RBP6.81□□□□□ -1.32
ATXN3-210ENST00000507965 RAI14Q9P0K7 980 aa6.81□□□□□ -1.32
ATXN3-210ENST00000507965 PLXNA1Q9UIW2 1896 aa6.81□□□□□ -1.32
ATXN3-210ENST00000507965 FLT1P17948 1338 aa6.8□□□□□ -1.32
ATXN3-210ENST00000507965 BCAR3O75815 825 aa6.8□□□□□ -1.32
ATXN3-210ENST00000507965 TFRCP02786 760 aaKnown RBP6.8□□□□□ -1.32
ATXN3-210ENST00000507965 HMGCRP04035 888 aa6.8□□□□□ -1.32
ATXN3-210ENST00000507965 GNAI3P08754 354 aa6.8□□□□□ -1.32
ATXN3-210ENST00000507965 CAP2P40123 477 aa6.8□□□□□ -1.32
ATXN3-210ENST00000507965 SETDB1Q15047 1291 aa6.8□□□□□ -1.32
ATXN3-210ENST00000507965 C7orf61Q8IZ16 206 aa6.8□□□□□ -1.32
ATXN3-210ENST00000507965 RETREG2Q8NC44 543 aa6.8□□□□□ -1.32
ATXN3-210ENST00000507965 VTI1AQ96AJ9 217 aa6.8□□□□□ -1.32
ATXN3-210ENST00000507965 COA7Q96BR5 231 aa6.8□□□□□ -1.32
ATXN3-210ENST00000507965 NSUN5Q96P11 429 aaKnown RBP6.8□□□□□ -1.32
ATXN3-210ENST00000507965 ASCC2Q9H1I8 757 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-210ENST00000507965 TXNRD2Q9NNW7 524 aa6.8□□□□□ -1.32
ATXN3-210ENST00000507965 AATFQ9NY61 560 aaKnown RBP eCLIP6.8□□□□□ -1.32
ATXN3-210ENST00000507965 STAP2Q9UGK3 403 aa6.8□□□□□ -1.32
ATXN3-210ENST00000507965 AKAP2Q9Y2D5 859 aa6.8□□□□□ -1.32
ATXN3-210ENST00000507965 XYLBO75191 536 aa6.79□□□□□ -1.32
ATXN3-210ENST00000507965 CT47B1P0C2W7 299 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-210ENST00000507965 SYN1P17600 705 aa6.79□□□□□ -1.32
ATXN3-210ENST00000507965 GSTO1P78417 241 aa6.79□□□□□ -1.32
ATXN3-210ENST00000507965 C11orf91Q3C1V1 193 aa6.79□□□□□ -1.32
ATXN3-210ENST00000507965 GORABQ5T7V8 394 aa6.79□□□□□ -1.32
ATXN3-210ENST00000507965 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.79□□□□□ -1.32
ATXN3-210ENST00000507965 MAPKAPK5Q8IW41 473 aa6.79□□□□□ -1.32
ATXN3-210ENST00000507965 CMTR1Q8N1G2 835 aaKnown RBP6.79□□□□□ -1.32
ATXN3-210ENST00000507965 FRAT1Q92837 279 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-210ENST00000507965 UBL7Q96S82 380 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-210ENST00000507965 DBNDD2Q9BQY9 259 aa6.79□□□□□ -1.32
ATXN3-210ENST00000507965 CEP41Q9BYV8 373 aa6.79□□□□□ -1.32
ATXN3-210ENST00000507965 MUC3BQ9H195 1237 aa6.79□□□□□ -1.32
ATXN3-210ENST00000507965 PIH1D3Q9NQM4 214 aaKnown RBP6.79□□□□□ -1.32
ATXN3-210ENST00000507965 LRP2BPQ9P2M1 347 aa6.79□□□□□ -1.32
ATXN3-210ENST00000507965 SAP30BPQ9UHR5 308 aaKnown RBP6.79□□□□□ -1.32
ATXN3-210ENST00000507965 GJD2Q9UKL4 321 aa6.79□□□□□ -1.32
ATXN3-210ENST00000507965 ZMYND8Q9ULU4 1186 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-210ENST00000507965 USP20Q9Y2K6 914 aa6.79□□□□□ -1.32
ATXN3-210ENST00000507965 NR2E3Q9Y5X4 410 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms