RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ZHX1Q9UKY1 873 aaPredicted RBP22.86■■□□□ 1.25
USP53-203ENST00000507597 MSCO60682 206 aa22.85■■□□□ 1.25
USP53-203ENST00000507597 INHAP05111 366 aa22.85■■□□□ 1.25
USP53-203ENST00000507597 TGFB3P10600 412 aa22.85■■□□□ 1.25
USP53-203ENST00000507597 GCFC2P16383 781 aaKnown RBP22.85■■□□□ 1.25
USP53-203ENST00000507597 TRAPPC10P48553 1259 aa22.85■■□□□ 1.25
USP53-203ENST00000507597 NR5A1Q13285 461 aa22.85■■□□□ 1.25
USP53-203ENST00000507597 IQSEC1Q6DN90 963 aa22.85■■□□□ 1.25
USP53-203ENST00000507597 MOXD1Q6UVY6 613 aa22.85■■□□□ 1.25
USP53-203ENST00000507597 OXER1Q8TDS5 423 aa22.85■■□□□ 1.25
USP53-203ENST00000507597 PGBD1Q96JS3 809 aa22.85■■□□□ 1.25
USP53-203ENST00000507597 FAM184BQ9ULE4 1060 aa22.85■■□□□ 1.25
USP53-203ENST00000507597 SNAI1O95863 264 aaPredicted RBP22.84■■□□□ 1.25
USP53-203ENST00000507597 SETQ01105 290 aaPredicted RBP22.84■■□□□ 1.25
USP53-203ENST00000507597 TTLL4Q14679 1199 aa22.84■■□□□ 1.25
USP53-203ENST00000507597 NIPA1Q7RTP0 329 aa22.84■■□□□ 1.25
USP53-203ENST00000507597 SCFD2Q8WU76 684 aa22.84■■□□□ 1.25
USP53-203ENST00000507597 GPRASP2Q96D09 838 aa22.84■■□□□ 1.25
USP53-203ENST00000507597 ZSWIM8A7E2V4 1837 aa22.84■■□□□ 1.25
USP53-203ENST00000507597 ASTN1O14525 1302 aa22.83■■□□□ 1.25
USP53-203ENST00000507597 PLXNA1Q9UIW2 1896 aa22.83■■□□□ 1.25
USP53-203ENST00000507597 NKRFO15226 690 aaKnown RBP eCLIP22.83■■□□□ 1.25
USP53-203ENST00000507597 IGHA2P01877 340 aa22.83■■□□□ 1.25
USP53-203ENST00000507597 PRKAR2AP13861 404 aaKnown RBP22.83■■□□□ 1.25
USP53-203ENST00000507597 AKR1A1P14550 325 aa22.83■■□□□ 1.25
USP53-203ENST00000507597 CAPN2P17655 700 aa22.83■■□□□ 1.25
USP53-203ENST00000507597 CNGA1P29973 690 aa22.83■■□□□ 1.25
USP53-203ENST00000507597 CIITAP33076 1130 aa22.83■■□□□ 1.25
USP53-203ENST00000507597 CACNB2Q08289 660 aaPredicted RBP22.83■■□□□ 1.25
USP53-203ENST00000507597 INF2Q27J81 1249 aa22.83■■□□□ 1.25
USP53-203ENST00000507597 CEP55Q53EZ4 464 aa22.83■■□□□ 1.25
USP53-203ENST00000507597 MXRA8Q9BRK3 442 aa22.83■■□□□ 1.25
USP53-203ENST00000507597 FIBPO43427 364 aa22.82■■□□□ 1.24
USP53-203ENST00000507597 NUCB2P80303 420 aa22.82■■□□□ 1.24
USP53-203ENST00000507597 ORC2Q13416 577 aaPredicted RBP22.82■■□□□ 1.24
USP53-203ENST00000507597 RILPL1Q5EBL4 403 aa22.82■■□□□ 1.24
USP53-203ENST00000507597 SEPT14Q6ZU15 432 aa22.82■■□□□ 1.24
USP53-203ENST00000507597 EEPD1Q7L9B9 569 aa22.82■■□□□ 1.24
USP53-203ENST00000507597 GIMAP8Q8ND71 665 aaPredicted RBP22.82■■□□□ 1.24
USP53-203ENST00000507597 SH3TC2Q8TF17 1288 aa22.82■■□□□ 1.24
USP53-203ENST00000507597 TNFRSF25Q93038 417 aa22.82■■□□□ 1.24
USP53-203ENST00000507597 INPP4AQ96PE3 977 aaPredicted RBP22.82■■□□□ 1.24
USP53-203ENST00000507597 MCOLN1Q9GZU1 580 aa22.82■■□□□ 1.24
USP53-203ENST00000507597 JADE2Q9NQC1 790 aa22.82■■□□□ 1.24
USP53-203ENST00000507597 RTEL1Q9NZ71 1219 aa22.82■■□□□ 1.24
USP53-203ENST00000507597 MRVI1Q9Y6F6 885 aa22.82■■□□□ 1.24
USP53-203ENST00000507597 SEPT4O43236 478 aa22.81■■□□□ 1.24
USP53-203ENST00000507597 CYBAP13498 195 aa22.81■■□□□ 1.24
USP53-203ENST00000507597 MTMR1Q13613 665 aa22.81■■□□□ 1.24
USP53-203ENST00000507597 LETM2Q2VYF4 491 aa22.81■■□□□ 1.24
USP53-203ENST00000507597 MAP3K21Q5TCX8 1036 aa22.81■■□□□ 1.24
USP53-203ENST00000507597 PPP4R3AQ6IN85 833 aa22.81■■□□□ 1.24
USP53-203ENST00000507597 FBXO16Q8IX29 292 aaPredicted RBP22.81■■□□□ 1.24
USP53-203ENST00000507597 TNS4Q8IZW8 715 aa22.81■■□□□ 1.24
USP53-203ENST00000507597 ARMC5Q96C12 935 aa22.81■■□□□ 1.24
USP53-203ENST00000507597 SPC25Q9HBM1 224 aa22.81■■□□□ 1.24
USP53-203ENST00000507597 TCEAL9Q9UHQ7 104 aa22.81■■□□□ 1.24
USP53-203ENST00000507597 UBIAD1Q9Y5Z9 338 aa22.81■■□□□ 1.24
USP53-203ENST00000507597 CYP3A7-CYP3A51PA0A087WV96 503 aa22.8■■□□□ 1.24
USP53-203ENST00000507597 RBM47A0AV96 593 aaKnown RBP22.8■■□□□ 1.24
USP53-203ENST00000507597 CCNT1O60563 726 aaKnown RBP22.8■■□□□ 1.24
USP53-203ENST00000507597 CYP3A7P24462 503 aa22.8■■□□□ 1.24
USP53-203ENST00000507597 ICAM3P32942 547 aa22.8■■□□□ 1.24
USP53-203ENST00000507597 MRPS9P82933 396 aaKnown RBP22.8■■□□□ 1.24
USP53-203ENST00000507597 PLA2G4DQ86XP0 818 aa22.8■■□□□ 1.24
USP53-203ENST00000507597 IL31RAQ8NI17 732 aa22.8■■□□□ 1.24
USP53-203ENST00000507597 CRYGNQ8WXF5 182 aa22.8■■□□□ 1.24
USP53-203ENST00000507597 IPO9Q96P70 1041 aaKnown RBP22.8■■□□□ 1.24
USP53-203ENST00000507597 WDR11Q9BZH6 1224 aa22.8■■□□□ 1.24
USP53-203ENST00000507597 MTMR6Q9Y217 621 aa22.8■■□□□ 1.24
USP53-203ENST00000507597 ATP6V1DQ9Y5K8 247 aa22.8■■□□□ 1.24
USP53-203ENST00000507597 MARCH6O60337 910 aa22.79■■□□□ 1.24
USP53-203ENST00000507597 BAG4O95429 457 aaKnown RBP22.79■■□□□ 1.24
USP53-203ENST00000507597 ZNF865P0CJ78 1059 aaPredicted RBP22.79■■□□□ 1.24
USP53-203ENST00000507597 ZSCAN22P10073 491 aaPredicted RBP22.79■■□□□ 1.24
USP53-203ENST00000507597 TNFAIP2Q03169 654 aa22.79■■□□□ 1.24
USP53-203ENST00000507597 NEDD9Q14511 834 aa22.79■■□□□ 1.24
USP53-203ENST00000507597 CCDC144BQ3MJ40 725 aa22.79■■□□□ 1.24
USP53-203ENST00000507597 Q9Y3F1 56 aa22.79■■□□□ 1.24
USP53-203ENST00000507597 MEIS1O00470 390 aa22.78■■□□□ 1.24
USP53-203ENST00000507597 ADAMTS3O15072 1205 aa22.78■■□□□ 1.24
USP53-203ENST00000507597 TXNP10599 105 aaKnown RBP22.78■■□□□ 1.24
USP53-203ENST00000507597 RARBP10826 455 aa22.78■■□□□ 1.24
USP53-203ENST00000507597 Q4G0T1 1027 aa22.78■■□□□ 1.24
USP53-203ENST00000507597 BRDTQ58F21 947 aaPredicted RBP22.78■■□□□ 1.24
USP53-203ENST00000507597 PRAMEF19Q5SWL8 479 aa22.78■■□□□ 1.24
USP53-203ENST00000507597 TAPT1Q6NXT6 567 aa22.78■■□□□ 1.24
USP53-203ENST00000507597 SENP7Q9BQF6 1050 aa22.78■■□□□ 1.24
USP53-203ENST00000507597 TMEM106CQ9BVX2 250 aa22.78■■□□□ 1.24
USP53-203ENST00000507597 DDX25Q9UHL0 483 aaKnown RBP22.78■■□□□ 1.24
USP53-203ENST00000507597 CIZ1Q9ULV3 898 aaPredicted RBP22.78■■□□□ 1.24
USP53-203ENST00000507597 SPATA31C2B4DYI2 1134 aa22.77■■□□□ 1.24
USP53-203ENST00000507597 BMP15O95972 392 aa22.77■■□□□ 1.24
USP53-203ENST00000507597 DUSP28Q4G0W2 176 aa22.77■■□□□ 1.24
USP53-203ENST00000507597 PRR16Q569H4 304 aa22.77■■□□□ 1.24
USP53-203ENST00000507597 ZNF333Q96JL9 665 aa22.77■■□□□ 1.24
USP53-203ENST00000507597 KATNBL1Q9H079 304 aa22.77■■□□□ 1.24
USP53-203ENST00000507597 AP5M1Q9H0R1 490 aa22.77■■□□□ 1.24
USP53-203ENST00000507597 RNF208Q9H0X6 261 aa22.77■■□□□ 1.24
USP53-203ENST00000507597 DDX20Q9UHI6 824 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms