RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 HMGB1P09429 215 aaKnown RBP17.95■□□□□ 0.46
DDR1-258ENST00000506573 TGFB3P10600 412 aa17.95■□□□□ 0.46
DDR1-258ENST00000506573 CSF2RAP15509 400 aa17.95■□□□□ 0.46
DDR1-258ENST00000506573 HOXA13P31271 388 aaPredicted RBP17.95■□□□□ 0.46
DDR1-258ENST00000506573 NBPF20Q3BBV1 942 aa17.95■□□□□ 0.46
DDR1-258ENST00000506573 FCHSD1Q86WN1 690 aa17.95■□□□□ 0.46
DDR1-258ENST00000506573 CCDC155Q8N6L0 562 aa17.95■□□□□ 0.46
DDR1-258ENST00000506573 SMARCC2Q8TAQ2 1214 aa17.95■□□□□ 0.46
DDR1-258ENST00000506573 AFG1LQ8WV93 481 aa17.95■□□□□ 0.46
DDR1-258ENST00000506573 PIBF1Q8WXW3 757 aa17.95■□□□□ 0.46
DDR1-258ENST00000506573 COPS5Q92905 334 aa17.95■□□□□ 0.46
DDR1-258ENST00000506573 NEK1Q96PY6 1258 aa17.95■□□□□ 0.46
DDR1-258ENST00000506573 IL23AQ9NPF7 189 aa17.95■□□□□ 0.46
DDR1-258ENST00000506573 MTMR10Q9NXD2 777 aa17.95■□□□□ 0.46
DDR1-258ENST00000506573 STXBP5LQ9Y2K9 1186 aa17.95■□□□□ 0.46
DDR1-258ENST00000506573 GRIN2DO15399 1336 aa17.95■□□□□ 0.46
DDR1-258ENST00000506573 TMEM265A0A087WTH1 108 aa17.94■□□□□ 0.46
DDR1-258ENST00000506573 OPLAHO14841 1288 aa17.94■□□□□ 0.46
DDR1-258ENST00000506573 CYTH3O43739 400 aa17.94■□□□□ 0.46
DDR1-258ENST00000506573 ARIH2O95376 493 aa17.94■□□□□ 0.46
DDR1-258ENST00000506573 CYP2C18P33260 490 aa17.94■□□□□ 0.46
DDR1-258ENST00000506573 CHMP4BP1P59074 171 aa17.94■□□□□ 0.46
DDR1-258ENST00000506573 PGM5Q15124 567 aa17.94■□□□□ 0.46
DDR1-258ENST00000506573 VSIG10LQ86VR7 867 aa17.94■□□□□ 0.46
DDR1-258ENST00000506573 RETREG2Q8NC44 543 aa17.94■□□□□ 0.46
DDR1-258ENST00000506573 EMID1Q96A84 441 aaPredicted RBP17.94■□□□□ 0.46
DDR1-258ENST00000506573 MYL10Q9BUA6 226 aa17.94■□□□□ 0.46
DDR1-258ENST00000506573 DDX41Q9UJV9 622 aaKnown RBP17.94■□□□□ 0.46
DDR1-258ENST00000506573 MYH6P13533 1939 aa17.94■□□□□ 0.46
DDR1-258ENST00000506573 FGBP02675 491 aa17.93■□□□□ 0.46
DDR1-258ENST00000506573 PFKMP08237 780 aa17.93■□□□□ 0.46
DDR1-258ENST00000506573 MMP3P08254 477 aa17.93■□□□□ 0.46
DDR1-258ENST00000506573 EPHB4P54760 987 aa17.93■□□□□ 0.46
DDR1-258ENST00000506573 FGD1P98174 961 aa17.93■□□□□ 0.46
DDR1-258ENST00000506573 ARHGAP1Q07960 439 aa17.93■□□□□ 0.46
DDR1-258ENST00000506573 BFSP2Q13515 415 aa17.93■□□□□ 0.46
DDR1-258ENST00000506573 PPTC7Q8NI37 304 aa17.93■□□□□ 0.46
DDR1-258ENST00000506573 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.93■□□□□ 0.46
DDR1-258ENST00000506573 NOC4LQ9BVI4 516 aaKnown RBP17.93■□□□□ 0.46
DDR1-258ENST00000506573 CCL23P55773 120 aa17.92■□□□□ 0.46
DDR1-258ENST00000506573 TMEM240Q5SV17 173 aa17.92■□□□□ 0.46
DDR1-258ENST00000506573 XRRA1Q6P2D8 792 aa17.92■□□□□ 0.46
DDR1-258ENST00000506573 SGMS1Q86VZ5 419 aa17.92■□□□□ 0.46
DDR1-258ENST00000506573 C7orf31Q8N865 590 aa17.92■□□□□ 0.46
DDR1-258ENST00000506573 FANCBQ8NB91 859 aa17.92■□□□□ 0.46
DDR1-258ENST00000506573 MLXIPQ9HAP2 919 aa17.92■□□□□ 0.46
DDR1-258ENST00000506573 TRMT13Q9NUP7 481 aaKnown RBP17.92■□□□□ 0.46
DDR1-258ENST00000506573 RBM28Q9NW13 759 aaKnown RBP17.92■□□□□ 0.46
DDR1-258ENST00000506573 ACTN1P12814 892 aa17.91■□□□□ 0.46
DDR1-258ENST00000506573 RFC2P35250 354 aa17.91■□□□□ 0.46
DDR1-258ENST00000506573 ZNF365Q70YC5 407 aa17.91■□□□□ 0.46
DDR1-258ENST00000506573 DHX32Q7L7V1 743 aaKnown RBP17.91■□□□□ 0.46
DDR1-258ENST00000506573 FAM161BQ96MY7 647 aa17.91■□□□□ 0.46
DDR1-258ENST00000506573 SPATA33Q96N06 139 aa17.91■□□□□ 0.46
DDR1-258ENST00000506573 EHMT1Q9H9B1 1298 aa17.91■□□□□ 0.46
DDR1-258ENST00000506573 PIK3CDO00329 1044 aa17.9■□□□□ 0.46
DDR1-258ENST00000506573 PITPNM1O00562 1244 aa17.9■□□□□ 0.46
DDR1-258ENST00000506573 PPFIA4O75335 1185 aa17.9■□□□□ 0.46
DDR1-258ENST00000506573 ACRP10323 421 aa17.9■□□□□ 0.46
DDR1-258ENST00000506573 SLC35G1Q2M3R5 365 aa17.9■□□□□ 0.46
DDR1-258ENST00000506573 TSGA10IPQ3SY00 556 aa17.9■□□□□ 0.46
DDR1-258ENST00000506573 MICU3Q86XE3 530 aa17.9■□□□□ 0.46
DDR1-258ENST00000506573 SLC17A8Q8NDX2 589 aa17.9■□□□□ 0.46
DDR1-258ENST00000506573 HERVK_113Q902F9 699 aa17.9■□□□□ 0.46
DDR1-258ENST00000506573 SEMA6BQ9H3T3 888 aa17.9■□□□□ 0.46
DDR1-258ENST00000506573 PSTPIP2Q9H939 334 aa17.9■□□□□ 0.46
DDR1-258ENST00000506573 NOP56O00567 594 aaKnown RBP17.89■□□□□ 0.45
DDR1-258ENST00000506573 REC8O95072 547 aa17.89■□□□□ 0.45
DDR1-258ENST00000506573 PLEKHA8P1O95397 391 aa17.89■□□□□ 0.45
DDR1-258ENST00000506573 GGPS1O95749 300 aa17.89■□□□□ 0.45
DDR1-258ENST00000506573 CYP2C9P11712 490 aa17.89■□□□□ 0.45
DDR1-258ENST00000506573 NEDD9Q14511 834 aa17.89■□□□□ 0.45
DDR1-258ENST00000506573 PTGISQ16647 500 aa17.89■□□□□ 0.45
DDR1-258ENST00000506573 CELF3Q5SZQ8 465 aaKnown RBP17.89■□□□□ 0.45
DDR1-258ENST00000506573 NLRX1Q86UT6 975 aa17.89■□□□□ 0.45
DDR1-258ENST00000506573 SESTD1Q86VW0 696 aa17.89■□□□□ 0.45
DDR1-258ENST00000506573 TEX2Q8IWB9 1127 aa17.89■□□□□ 0.45
DDR1-258ENST00000506573 SRBD1Q8N5C6 995 aaKnown RBP17.89■□□□□ 0.45
DDR1-258ENST00000506573 CAGE1Q8TC20 777 aa17.89■□□□□ 0.45
DDR1-258ENST00000506573 LRRC2Q9BYS8 371 aa17.89■□□□□ 0.45
DDR1-258ENST00000506573 MSRAQ9UJ68 235 aa17.89■□□□□ 0.45
DDR1-258ENST00000506573 SPDYE3A6NKU9 549 aa17.88■□□□□ 0.45
DDR1-258ENST00000506573 ZBTB43O43298 467 aa17.88■□□□□ 0.45
DDR1-258ENST00000506573 FIBPO43427 364 aa17.88■□□□□ 0.45
DDR1-258ENST00000506573 PARNO95453 639 aaKnown RBP17.88■□□□□ 0.45
DDR1-258ENST00000506573 RXRAP19793 462 aa17.88■□□□□ 0.45
DDR1-258ENST00000506573 DNAJB2P25686 324 aa17.88■□□□□ 0.45
DDR1-258ENST00000506573 RAB30Q15771 203 aa17.88■□□□□ 0.45
DDR1-258ENST00000506573 MYSM1Q5VVJ2 828 aa17.88■□□□□ 0.45
DDR1-258ENST00000506573 TMTC3Q6ZXV5 915 aa17.88■□□□□ 0.45
DDR1-258ENST00000506573 C16orf59Q7L2K0 433 aa17.88■□□□□ 0.45
DDR1-258ENST00000506573 CCDC82Q8N4S0 544 aa17.88■□□□□ 0.45
DDR1-258ENST00000506573 GIMAP8Q8ND71 665 aaPredicted RBP17.88■□□□□ 0.45
DDR1-258ENST00000506573 CDHR1Q96JP9 859 aa17.88■□□□□ 0.45
DDR1-258ENST00000506573 CCDC196A0A1B0GTZ2 297 aa17.87■□□□□ 0.45
DDR1-258ENST00000506573 ZBBXA8MT70 800 aa17.87■□□□□ 0.45
DDR1-258ENST00000506573 UBA1P22314 1058 aaKnown RBP17.87■□□□□ 0.45
DDR1-258ENST00000506573 PSEN2P49810 448 aa17.87■□□□□ 0.45
DDR1-258ENST00000506573 MFSD10Q14728 455 aa17.87■□□□□ 0.45
DDR1-258ENST00000506573 RTN1Q16799 776 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms