RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 KLRF2D3W0D1 207 aa13.25□□□□□ -0.29
SIL1-208ENST00000505945 RFXAPO00287 272 aa13.25□□□□□ -0.29
SIL1-208ENST00000505945 OPLAHO14841 1288 aa13.25□□□□□ -0.29
SIL1-208ENST00000505945 EIF3JO75822 258 aaKnown RBP13.25□□□□□ -0.29
SIL1-208ENST00000505945 CA3P07451 260 aa13.25□□□□□ -0.29
SIL1-208ENST00000505945 NR3C2P08235 984 aa13.25□□□□□ -0.29
SIL1-208ENST00000505945 CASTP20810 708 aaKnown RBP13.25□□□□□ -0.29
SIL1-208ENST00000505945 GDF6Q6KF10 455 aaPredicted RBP13.25□□□□□ -0.29
SIL1-208ENST00000505945 CYB5R4Q7L1T6 521 aa13.25□□□□□ -0.29
SIL1-208ENST00000505945 MICALL1Q8N3F8 863 aa13.25□□□□□ -0.29
SIL1-208ENST00000505945 KAT2BQ92831 832 aa13.25□□□□□ -0.29
SIL1-208ENST00000505945 ASB2Q96Q27 587 aa13.25□□□□□ -0.29
SIL1-208ENST00000505945 CTAGE1Q96RT6 745 aa13.25□□□□□ -0.29
SIL1-208ENST00000505945 AMNQ9BXJ7 453 aa13.25□□□□□ -0.29
SIL1-208ENST00000505945 CERS4Q9HA82 394 aa13.25□□□□□ -0.29
SIL1-208ENST00000505945 PXMP2Q9NR77 195 aa13.25□□□□□ -0.29
SIL1-208ENST00000505945 DDX41Q9UJV9 622 aaKnown RBP13.25□□□□□ -0.29
SIL1-208ENST00000505945 KIAA1217Q5T5P2 1943 aa13.24□□□□□ -0.29
SIL1-208ENST00000505945 PPP1R11O60927 126 aaPredicted RBP13.24□□□□□ -0.29
SIL1-208ENST00000505945 MRPS5P82675 430 aaKnown RBP13.24□□□□□ -0.29
SIL1-208ENST00000505945 SEC23AQ15436 765 aa13.24□□□□□ -0.29
SIL1-208ENST00000505945 DGKDQ16760 1214 aa13.24□□□□□ -0.29
SIL1-208ENST00000505945 SESTD1Q86VW0 696 aa13.24□□□□□ -0.29
SIL1-208ENST00000505945 PHOSPHO2Q8TCD6 241 aa13.24□□□□□ -0.29
SIL1-208ENST00000505945 MRVI1Q9Y6F6 885 aa13.24□□□□□ -0.29
SIL1-208ENST00000505945 PRRC2BQ5JSZ5 2229 aaKnown RBP13.24□□□□□ -0.29
SIL1-208ENST00000505945 BDP1A6H8Y1 2624 aa13.23□□□□□ -0.29
SIL1-208ENST00000505945 RBAK-RBAKDNI3L0D1 243 aa13.23□□□□□ -0.29
SIL1-208ENST00000505945 TNFRSF10AO00220 468 aa13.23□□□□□ -0.29
SIL1-208ENST00000505945 MYCLP12524 364 aaPredicted RBP13.23□□□□□ -0.29
SIL1-208ENST00000505945 PDE4AP27815 886 aa13.23□□□□□ -0.29
SIL1-208ENST00000505945 HOXA13P31271 388 aaPredicted RBP13.23□□□□□ -0.29
SIL1-208ENST00000505945 HSD17B4P51659 736 aa13.23□□□□□ -0.29
SIL1-208ENST00000505945 GPNMBQ14956 572 aa13.23□□□□□ -0.29
SIL1-208ENST00000505945 HERC6Q8IVU3 1022 aa13.23□□□□□ -0.29
SIL1-208ENST00000505945 DHX37Q8IY37 1157 aaKnown RBP13.23□□□□□ -0.29
SIL1-208ENST00000505945 MTMR8Q96EF0 704 aa13.23□□□□□ -0.29
SIL1-208ENST00000505945 SLC9A7Q96T83 725 aa13.23□□□□□ -0.29
SIL1-208ENST00000505945 ALG1Q9BT22 464 aa13.23□□□□□ -0.29
SIL1-208ENST00000505945 HDAC6Q9UBN7 1215 aa13.23□□□□□ -0.29
SIL1-208ENST00000505945 MAD2L2Q9UI95 211 aa13.23□□□□□ -0.29
SIL1-208ENST00000505945 PCDHA1Q9Y5I3 950 aa13.23□□□□□ -0.29
SIL1-208ENST00000505945 MUC3AQ02505 3323 aa13.23□□□□□ -0.29
SIL1-208ENST00000505945 PALM3A6NDB9 673 aaPredicted RBP13.22□□□□□ -0.29
SIL1-208ENST00000505945 EPOPA6NHQ4 379 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 ZBTB5O15062 677 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 SORBS3O60504 671 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 RGS20O76081 388 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 ARHGEF15O94989 841 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 ZNF286BP0CG31 522 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 GSPT1P15170 499 aaKnown RBP13.22□□□□□ -0.29
SIL1-208ENST00000505945 SELPP16109 830 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 PSEN2P49810 448 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 LAMC2Q13753 1193 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 SLC35G1Q2M3R5 365 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 STOX1Q6ZVD7 989 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 LRRC8DQ7L1W4 858 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 HOMER1Q86YM7 354 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 CCDC155Q8N6L0 562 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 C7orf31Q8N865 590 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 CAGE1Q8TC20 777 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 AFAP1L1Q8TED9 768 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 DHX38Q92620 1227 aaKnown RBP13.22□□□□□ -0.29
SIL1-208ENST00000505945 EMID1Q96A84 441 aaPredicted RBP13.22□□□□□ -0.29
SIL1-208ENST00000505945 ZFP91Q96JP5 570 aaPredicted RBP13.22□□□□□ -0.29
SIL1-208ENST00000505945 PDCD2LQ9BRP1 358 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 GTF2IRD1Q9UHL9 959 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 BAZ2BQ9UIF8 2168 aaKnown RBP13.22□□□□□ -0.29
SIL1-208ENST00000505945 TRANK1O15050 2925 aa13.22□□□□□ -0.29
SIL1-208ENST00000505945 MYH7BA7E2Y1 1941 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 TANC1Q9C0D5 1861 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 KIF28PB7ZC32 967 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 BAIAP3O94812 1187 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 CKBP12277 381 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 ZNF200P98182 395 aaPredicted RBP13.21□□□□□ -0.29
SIL1-208ENST00000505945 GHRHRQ02643 423 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 PTH1RQ03431 593 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 TAP1Q03518 808 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 TRDNQ13061 729 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 MFSD10Q14728 455 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 KIAA0753Q2KHM9 967 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 MYSM1Q5VVJ2 828 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 KRT40Q6A162 431 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 TMCO2Q7Z6W1 182 aaPredicted RBP13.21□□□□□ -0.29
SIL1-208ENST00000505945 VSIG10LQ86VR7 867 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 PPTC7Q8NI37 304 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 ADAMTS19Q8TE59 1207 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 ARNTL2Q8WYA1 636 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 PIGSQ96S52 555 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 TSPYL2Q9H2G4 693 aaPredicted RBP13.21□□□□□ -0.29
SIL1-208ENST00000505945 SENP2Q9HC62 589 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 MAP3K20Q9NYL2 800 aaKnown RBP13.21□□□□□ -0.29
SIL1-208ENST00000505945 MTCH2Q9Y6C9 303 aa13.21□□□□□ -0.29
SIL1-208ENST00000505945 REV3LO60673 3130 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 HAS3O00219 553 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 IFIT3O14879 490 aaKnown RBP13.2□□□□□ -0.3
SIL1-208ENST00000505945 TLL1O43897 1013 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 NBNO60934 754 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 PPFIA4O75335 1185 aa13.2□□□□□ -0.3
SIL1-208ENST00000505945 F2P00734 622 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms