RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 ACBD3Q9H3P7 528 aa17.79■□□□□ 0.44
DDX41-205ENST00000505081 MED4Q9NPJ6 270 aa17.79■□□□□ 0.44
DDX41-205ENST00000505081 TBC1D7Q9P0N9 293 aa17.79■□□□□ 0.44
DDX41-205ENST00000505081 AHDC1Q5TGY3 1603 aaPredicted RBP17.79■□□□□ 0.44
DDX41-205ENST00000505081 GPR75-ASB3A0A0A6YYF3 556 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 PDHBP11177 359 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 CDK5RAP2Q96SN8 1893 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 FGFBP2Q9BYJ0 223 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 TANGO6Q9C0B7 1094 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 TARSL2A2RTX5 802 aaKnown RBP17.78■□□□□ 0.44
DDX41-205ENST00000505081 AGPSO00116 658 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 SLURP2P0DP57 97 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 CDK17Q00537 523 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 SEMA3FQ13275 785 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 LRRC31Q6UY01 552 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 C10orf67Q8IYJ2 551 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 ZNF287Q9HBT7 754 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 NLRC4Q9NPP4 1024 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 COL24A1Q17RW2 1714 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 ANKRD65E5RJM6 399 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 BUB1O43683 1085 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 AARSP49588 968 aaKnown RBP eCLIP17.78■□□□□ 0.444e-6■■□□□ 13.1
DDX41-205ENST00000505081 MAPK8IP2Q13387 824 aaPredicted RBP17.78■□□□□ 0.44
DDX41-205ENST00000505081 MAN2A1Q16706 1144 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 MAP9Q49MG5 647 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 LRRC55Q6ZSA7 311 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 RAD54LQ92698 747 aa17.78■□□□□ 0.44
DDX41-205ENST00000505081 USO1O60763 962 aaKnown RBP17.77■□□□□ 0.44
DDX41-205ENST00000505081 TACC1O75410 805 aa17.77■□□□□ 0.44
DDX41-205ENST00000505081 CACNB1Q02641 598 aaPredicted RBP17.77■□□□□ 0.44
DDX41-205ENST00000505081 MFSD14BQ5SR56 506 aa17.77■□□□□ 0.44
DDX41-205ENST00000505081 RC3H1Q5TC82 1133 aaKnown RBP17.77■□□□□ 0.44
DDX41-205ENST00000505081 BAP1Q92560 729 aa17.77■□□□□ 0.44
DDX41-205ENST00000505081 RPGRIP1Q96KN7 1286 aa17.77■□□□□ 0.44
DDX41-205ENST00000505081 RIOX1Q9H6W3 641 aa17.77■□□□□ 0.44
DDX41-205ENST00000505081 VIPAS39Q9H9C1 493 aa17.77■□□□□ 0.44
DDX41-205ENST00000505081 JRKLQ9Y4A0 524 aa17.77■□□□□ 0.44
DDX41-205ENST00000505081 MYO1CO00159 1063 aa17.77■□□□□ 0.43
DDX41-205ENST00000505081 HNRNPH3P31942 346 aaKnown RBP17.77■□□□□ 0.43
DDX41-205ENST00000505081 DNA2P51530 1060 aa17.77■□□□□ 0.43
DDX41-205ENST00000505081 ADCY7P51828 1080 aa17.77■□□□□ 0.43
DDX41-205ENST00000505081 RASSF7Q02833 373 aa17.77■□□□□ 0.43
DDX41-205ENST00000505081 TRIM58Q8NG06 486 aa17.77■□□□□ 0.43
DDX41-205ENST00000505081 CWC15Q9P013 229 aaKnown RBP17.77■□□□□ 0.43
DDX41-205ENST00000505081 SSBP05455 408 aaKnown RBP eCLIP17.76■□□□□ 0.43
DDX41-205ENST00000505081 AKR1B1P15121 316 aa17.76■□□□□ 0.43
DDX41-205ENST00000505081 RFC4P35249 363 aa17.76■□□□□ 0.43
DDX41-205ENST00000505081 SLC1A4P43007 532 aa17.76■□□□□ 0.43
DDX41-205ENST00000505081 MAGEA1P43355 309 aa17.76■□□□□ 0.43
DDX41-205ENST00000505081 KCNMA1Q12791 1236 aa17.76■□□□□ 0.43
DDX41-205ENST00000505081 TTBK2Q6IQ55 1244 aa17.76■□□□□ 0.43
DDX41-205ENST00000505081 AFAP1L1Q8TED9 768 aa17.76■□□□□ 0.43
DDX41-205ENST00000505081 OSBPL9Q96SU4 736 aa17.76■□□□□ 0.43
DDX41-205ENST00000505081 TRIM34Q9BYJ4 488 aa17.76■□□□□ 0.43
DDX41-205ENST00000505081 TSGA10Q9BZW7 698 aa17.76■□□□□ 0.43
DDX41-205ENST00000505081 PPP1R11O60927 126 aaPredicted RBP17.76■□□□□ 0.43
DDX41-205ENST00000505081 SLC16A2P36021 539 aa17.76■□□□□ 0.43
DDX41-205ENST00000505081 FXR2P51116 673 aaKnown RBP eCLIP17.76■□□□□ 0.43
DDX41-205ENST00000505081 GUF1Q8N442 669 aaKnown RBP17.76■□□□□ 0.43
DDX41-205ENST00000505081 CNBD1Q8NA66 436 aa17.76■□□□□ 0.43
DDX41-205ENST00000505081 SPATA4Q8NEY3 305 aa17.76■□□□□ 0.43
DDX41-205ENST00000505081 MTMR8Q96EF0 704 aa17.76■□□□□ 0.43
DDX41-205ENST00000505081 CRACR2AQ9BSW2 395 aa17.76■□□□□ 0.43
DDX41-205ENST00000505081 RRP15Q9Y3B9 282 aaKnown RBP17.76■□□□□ 0.43
DDX41-205ENST00000505081 F8W031 263 aaPredicted RBP17.75■□□□□ 0.43
DDX41-205ENST00000505081 PPP1R2P41236 205 aa17.75■□□□□ 0.43
DDX41-205ENST00000505081 TMEM266Q2M3C6 531 aa17.75■□□□□ 0.43
DDX41-205ENST00000505081 COBLL1Q53SF7 1204 aa17.75■□□□□ 0.43
DDX41-205ENST00000505081 SND1Q7KZF4 910 aaKnown RBP eCLIP17.75■□□□□ 0.43
DDX41-205ENST00000505081 SRLQ86TD4 932 aa17.75■□□□□ 0.43
DDX41-205ENST00000505081 MS4A14Q96JA4 679 aa17.75■□□□□ 0.43
DDX41-205ENST00000505081 STK17AQ9UEE5 414 aa17.75■□□□□ 0.43
DDX41-205ENST00000505081 PVALEFA0A1B0GWK0 134 aa17.75■□□□□ 0.43
DDX41-205ENST00000505081 MCM3P25205 808 aa17.75■□□□□ 0.43
DDX41-205ENST00000505081 ENOX2Q16206 610 aaKnown RBP17.75■□□□□ 0.43
DDX41-205ENST00000505081 KRT79Q5XKE5 535 aa17.75■□□□□ 0.43
DDX41-205ENST00000505081 DPP8Q6V1X1 898 aaPredicted RBP17.75■□□□□ 0.43
DDX41-205ENST00000505081 RSPH14Q9UHP6 348 aa17.75■□□□□ 0.43
DDX41-205ENST00000505081 GOLGB1Q14789 3259 aaKnown RBP17.75■□□□□ 0.43
DDX41-205ENST00000505081 NPHP3-ACAD11A0A0J9YXS1 232 aa17.75■□□□□ 0.43
DDX41-205ENST00000505081 TDRD12Q587J7 1177 aaKnown RBP17.75■□□□□ 0.43
DDX41-205ENST00000505081 CACNA2D4Q7Z3S7 1137 aa17.75■□□□□ 0.43
DDX41-205ENST00000505081 NELFCDQ8IXH7 590 aa17.75■□□□□ 0.43
DDX41-205ENST00000505081 FNBP4Q8N3X1 1017 aaPredicted RBP17.75■□□□□ 0.43
DDX41-205ENST00000505081 MTMR4Q9NYA4 1195 aa17.75■□□□□ 0.43
DDX41-205ENST00000505081 NT5C2P49902 561 aa17.74■□□□□ 0.43
DDX41-205ENST00000505081 NAP1L1P55209 391 aaKnown RBP17.74■□□□□ 0.43
DDX41-205ENST00000505081 PDXDC1Q6P996 788 aa17.74■□□□□ 0.43
DDX41-205ENST00000505081 AENQ8WTP8 325 aaKnown RBP17.74■□□□□ 0.43
DDX41-205ENST00000505081 ESYT2A0FGR8 921 aa17.74■□□□□ 0.43
DDX41-205ENST00000505081 HGSNATQ68CP4 663 aa17.74■□□□□ 0.43
DDX41-205ENST00000505081 HAS1Q92839 578 aa17.74■□□□□ 0.43
DDX41-205ENST00000505081 TRAF5O00463 557 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 ARID5AQ03989 594 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 COASYQ13057 564 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 MMGT1Q8N4V1 131 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 GOLGA6L1Q8N7Z2 621 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 RPGRQ92834 1020 aaKnown RBP17.73■□□□□ 0.43
DDX41-205ENST00000505081 DNAJC19Q96DA6 116 aa17.73■□□□□ 0.43
DDX41-205ENST00000505081 C8orf37Q96NL8 207 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms