RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 CCDC62Q6P9F0 684 aa14.37□□□□□ -0.11
PDGFRA-204ENST00000504461 STOX1Q6ZVD7 989 aa14.37□□□□□ -0.11
PDGFRA-204ENST00000504461 IL27Q8NEV9 243 aa14.37□□□□□ -0.11
PDGFRA-204ENST00000504461 AFG1LQ8WV93 481 aa14.37□□□□□ -0.11
PDGFRA-204ENST00000504461 TTYH1Q9H313 450 aaPredicted RBP14.37□□□□□ -0.11
PDGFRA-204ENST00000504461 SENP2Q9HC62 589 aa14.37□□□□□ -0.11
PDGFRA-204ENST00000504461 NOD1Q9Y239 953 aa14.37□□□□□ -0.11
PDGFRA-204ENST00000504461 MRVI1Q9Y6F6 885 aa14.37□□□□□ -0.11
PDGFRA-204ENST00000504461 DOCK5Q9H7D0 1870 aa14.37□□□□□ -0.11
PDGFRA-204ENST00000504461 TANC1Q9C0D5 1861 aa14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 PNMA6FA0A0J9YX94 578 aa14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 GCOM1H8Y6P7 765 aaPredicted RBP14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 POLR2MP0CAP2 368 aa14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 CYP2C9P11712 490 aa14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 CASTP20810 708 aaKnown RBP14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 HOXA13P31271 388 aaPredicted RBP14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 PTPN11Q06124 597 aaPredicted RBP14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 TROAPQ12815 778 aa14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 NFXL1Q6ZNB6 911 aa14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 OTOP2Q7RTS6 562 aa14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 RETREG2Q8NC44 543 aa14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 CTCFLQ8NI51 663 aaPredicted RBP14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 IGDCC4Q8TDY8 1250 aa14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 MYLIPQ8WY64 445 aa14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 HERVK_113Q902F9 699 aa14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 SCLYQ96I15 445 aa14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 UPF2Q9HAU5 1272 aaKnown RBP14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 DDX41Q9UJV9 622 aaKnown RBP14.36□□□□□ -0.11
PDGFRA-204ENST00000504461 CCDC69A6NI79 296 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 DLL1O00548 723 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 OPLAHO14841 1288 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 MMP3P08254 477 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 KIF5BP33176 963 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 MCM5P33992 734 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 ANTXR2P58335 489 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 ANAPC15P60006 121 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 ARHGAP1Q07960 439 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 DGKDQ16760 1214 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 RASIP1Q5U651 963 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 KCNV1Q6PIU1 500 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 FCHSD1Q86WN1 690 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 DHX37Q8IY37 1157 aaKnown RBP14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 MB21D2Q8IYB1 491 aaPredicted RBP14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 PPP1R13LQ8WUF5 828 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 PIBF1Q8WXW3 757 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 TIFAQ96CG3 184 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 PDCD2LQ9BRP1 358 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 WNT8AQ9H1J5 351 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 MSRAQ9UJ68 235 aa14.35□□□□□ -0.11
PDGFRA-204ENST00000504461 GRXCR1A8MXD5 290 aa14.34□□□□□ -0.11
PDGFRA-204ENST00000504461 PRC1O43663 620 aa14.34□□□□□ -0.11
PDGFRA-204ENST00000504461 CYTH3O43739 400 aa14.34□□□□□ -0.11
PDGFRA-204ENST00000504461 FOSL2P15408 326 aa14.34□□□□□ -0.11
PDGFRA-204ENST00000504461 CCND2P30279 289 aa14.34□□□□□ -0.11
PDGFRA-204ENST00000504461 GHRHRQ02643 423 aa14.34□□□□□ -0.11
PDGFRA-204ENST00000504461 LAMC2Q13753 1193 aa14.34□□□□□ -0.11
PDGFRA-204ENST00000504461 PGM5Q15124 567 aa14.34□□□□□ -0.11
PDGFRA-204ENST00000504461 ZNF654Q8IZM8 581 aa14.34□□□□□ -0.11
PDGFRA-204ENST00000504461 TMEM87BQ96K49 555 aa14.34□□□□□ -0.11
PDGFRA-204ENST00000504461 NEK1Q96PY6 1258 aa14.34□□□□□ -0.11
PDGFRA-204ENST00000504461 MAP3K14Q99558 947 aa14.34□□□□□ -0.11
PDGFRA-204ENST00000504461 ZNF576Q9H609 170 aa14.34□□□□□ -0.11
PDGFRA-204ENST00000504461 LY9Q9HBG7 655 aa14.34□□□□□ -0.11
PDGFRA-204ENST00000504461 KAT6AQ92794 2004 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 ZBBXA8MT70 800 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 DDAH1O94760 285 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 PFKMP08237 780 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 ACTN1P12814 892 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 GNAQP50148 359 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 BFSP2Q13515 415 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 PTGISQ16647 500 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 SLC35G1Q2M3R5 365 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 DHX32Q7L7V1 743 aaKnown RBP14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 DEFB128Q7Z7B8 93 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 VSIG10LQ86VR7 867 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 CCDC155Q8N6L0 562 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 MAFAQ8NHW3 353 aaPredicted RBP14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 RRP36Q96EU6 259 aaKnown RBP14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 LZTS2Q9BRK4 669 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 MYL10Q9BUA6 226 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 KATNAL1Q9BW62 490 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 PBX4Q9BYU1 374 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 CXXC1Q9P0U4 656 aaPredicted RBP14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 SEC63Q9UGP8 760 aaKnown RBP14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 SLC4A7Q9Y6M7 1214 aa14.33□□□□□ -0.12
PDGFRA-204ENST00000504461 LAMA2P24043 3122 aaKnown RBP14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 COL6A3P12111 3177 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 PITPNM1O00562 1244 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 CALM1P0DP23 149 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 CALM2P0DP24 149 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 CALM3P0DP25 149 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 TGFB3P10600 412 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 SMARCA1P28370 1054 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 RFC2P35250 354 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 PBX2P40425 430 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 GRIN2CQ14957 1233 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 RAB30Q15771 203 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 C8orf34Q49A92 452 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 C7orf31Q8N865 590 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 PPTC7Q8NI37 304 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms