RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 ERICH2A1L162 156 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 EFCAB8A8MWE9 144 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 CCT6AP40227 531 aaKnown RBP7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 PLCD1P51178 756 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 SEC23AQ15436 765 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 LDLRAD1Q5T700 205 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 CC2D1AQ6P1N0 951 aaPredicted RBP7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 SMIM5Q71RC9 77 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 PTF1AQ7RTS3 328 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 KRT27Q7Z3Y8 459 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 ENAHQ8N8S7 591 aaPredicted RBP7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 IGSF22Q8N9C0 903 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 SPATA20Q8TB22 786 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 WASF1Q92558 559 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 EDEM1Q92611 657 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 IFT43Q96FT9 208 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 BAZ2BQ9UIF8 2168 aaKnown RBP7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 AKR1B15C9JRZ8 316 aaPredicted RBP7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 J3QL48 77 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 CASP14P31944 242 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 FXR1P51114 621 aaKnown RBP eCLIP7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 WDR4P57081 412 aaKnown RBP7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 CUL4BQ13620 913 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 C11orf91Q3C1V1 193 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 RSRC2Q7L4I2 434 aaKnown RBP7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 FCHSD1Q86WN1 690 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 ACRBPQ8NEB7 543 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 NEK11Q8NG66 645 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 ZSCAN10Q96SZ4 725 aaPredicted RBP7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 UBAC1Q9BSL1 405 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 NACAP1Q9BZK3 213 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 PKD2L1Q9P0L9 805 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 HOOK1Q9UJC3 728 aaKnown RBP7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 MAPK8IP1Q9UQF2 711 aa7.43□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 TRIM75PA6NK02 468 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 TUBB4AP04350 444 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 CHRNDQ07001 517 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 SART3Q15020 963 aaKnown RBP7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 NPY5RQ15761 445 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 IL17AQ16552 155 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 TMEM214Q6NUQ4 689 aaKnown RBP7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 GJD3Q8N144 294 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 ZNF384Q8TF68 577 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 ACSBG1Q96GR2 724 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 SUGCTQ9HAC7 445 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 ADD3Q9UEY8 706 aaKnown RBP7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 CTNND2Q9UQB3 1225 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 SBF2Q86WG5 1849 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 COL4A1P02462 1669 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 KCNQ2O43526 872 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 OAS2P29728 719 aaKnown RBP7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 TXLNAP40222 546 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 DHX8Q14562 1220 aaKnown RBP7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 FAM47AQ5JRC9 791 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 SPATA1Q5VX52 437 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 ELOA2Q8IYF1 753 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 CDC5LQ99459 802 aaKnown RBP7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 PHF20Q9BVI0 1012 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 NIFKQ9BYG3 293 aaKnown RBP7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 VPS16Q9H269 839 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 TFR2Q9UP52 801 aa7.42□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 PDGFAP04085 211 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 GYPCP04921 128 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 CYP2C19P33261 490 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 KRT2P35908 639 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 PBX1P40424 430 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 AKAP17AQ02040 695 aaKnown RBP7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 ZNF569Q5MCW4 686 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 WWC2Q6AWC2 1192 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 INTS5Q6P9B9 1019 aaKnown RBP7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 PPFIBP1Q86W92 1011 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 SRBD1Q8N5C6 995 aaKnown RBP7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 SRRTQ9BXP5 876 aaKnown RBP7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 FUT8Q9BYC5 575 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 ARGLU1Q9NWB6 273 aaPredicted RBP7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 AATFQ9NY61 560 aaKnown RBP eCLIP7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 JAG2Q9Y219 1238 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 NHSQ6T4R5 1651 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 XDHP47989 1333 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 PNPLA7Q6ZV29 1317 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 SYNRGQ9UMZ2 1314 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 PNMA6FA0A0J9YX94 578 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 CCDC196A0A1B0GTZ2 297 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 A6NHS1 94 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 ERVV-1B6SEH8 477 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 H3BQF6 201 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 MYO1BO43795 1136 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 CYP2D6P10635 497 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 KLRK1P26718 216 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 MZF1P28698 734 aaPredicted RBP7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 ERCC5P28715 1186 aaPredicted RBP7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 MCM7P33993 719 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 HNRNPH2P55795 449 aaKnown RBP7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 KCNQ4P56696 695 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 ERVK-24P63145 666 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 SMC1AQ14683 1233 aaKnown RBP7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 IFIT1BQ5T764 474 aaKnown RBP7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 CDKAL1Q5VV42 579 aa7.41□□□□□ -1.22
NPHP3-AS1-202ENST00000504440 TREML1Q86YW5 311 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms