RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 PROM2Q8N271 834 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 CRACR2BQ8N4Y2 399 aaPredicted RBP6.59□□□□□ -1.35
LINC02397-201ENST00000504409 HPS1Q92902 700 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 SH3GL1Q99961 368 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 C19orf44Q9H6X5 657 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 LZTFL1Q9NQ48 299 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 CCDC87Q9NVE4 849 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 NVLO15381 856 aaKnown RBP6.59□□□□□ -1.35
LINC02397-201ENST00000504409 H2AFYO75367 372 aaKnown RBP6.59□□□□□ -1.35
LINC02397-201ENST00000504409 SCG2P13521 617 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 SP100P23497 879 aaPredicted RBP6.59□□□□□ -1.35
LINC02397-201ENST00000504409 MED21Q13503 144 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 BTNL9Q6UXG8 535 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 ATP11CQ8NB49 1132 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 UGGT1Q9NYU2 1555 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 IFIT3O14879 490 aaKnown RBP6.59□□□□□ -1.35
LINC02397-201ENST00000504409 DCTN2Q13561 401 aaKnown RBP6.59□□□□□ -1.35
LINC02397-201ENST00000504409 BRD8Q9H0E9 1235 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 THAP9Q9H5L6 903 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 ATXN10Q9UBB4 475 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 RABGEF1Q9UJ41 708 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 ADGRA2Q96PE1 1338 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 H0YCG3 227 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 FKBP6O75344 327 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 ACTN1P12814 892 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 IDO1P14902 403 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 CHMLP26374 656 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 EEF1DP29692 281 aaKnown RBP6.59□□□□□ -1.35
LINC02397-201ENST00000504409 STAT2P52630 851 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 KRT81Q14533 505 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 AIDAQ96BJ3 306 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 ITPKCQ96DU7 683 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 STAP2Q9UGK3 403 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 RWDD2AQ9UIY3 292 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 CARD8Q9Y2G2 431 aa6.59□□□□□ -1.35
LINC02397-201ENST00000504409 WDR17Q8IZU2 1322 aa6.59□□□□□ -1.36
LINC02397-201ENST00000504409 IQGAP1P46940 1657 aa6.59□□□□□ -1.36
LINC02397-201ENST00000504409 PABPN1LA6NDY0 278 aaKnown RBP6.59□□□□□ -1.36
LINC02397-201ENST00000504409 SERPINB1P30740 379 aa6.59□□□□□ -1.36
LINC02397-201ENST00000504409 RPL22P35268 128 aaKnown RBP6.59□□□□□ -1.36
LINC02397-201ENST00000504409 RRAGBQ5VZM2 374 aa6.59□□□□□ -1.36
LINC02397-201ENST00000504409 INPP5DQ92835 1189 aa6.59□□□□□ -1.36
LINC02397-201ENST00000504409 USP28Q96RU2 1077 aa6.59□□□□□ -1.36
LINC02397-201ENST00000504409 DBF4Q9UBU7 674 aaPredicted RBP6.59□□□□□ -1.36
LINC02397-201ENST00000504409 SH3GLB1Q9Y371 365 aa6.59□□□□□ -1.36
LINC02397-201ENST00000504409 RASSF9O75901 435 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 PRKAR2BP31323 418 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 CDK17Q00537 523 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 DSG1Q02413 1049 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 DMPKQ09013 629 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 SPARCL1Q14515 664 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 TRADDQ15628 312 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 SPTY2D1Q68D10 685 aaPredicted RBP6.58□□□□□ -1.36
LINC02397-201ENST00000504409 TRMT10CQ7L0Y3 403 aaKnown RBP6.58□□□□□ -1.36
LINC02397-201ENST00000504409 QKIQ96PU8 341 aaKnown RBP eCLIP6.58□□□□□ -1.36
LINC02397-201ENST00000504409 CSRNP1Q96S65 589 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 BTBD7Q9P203 1132 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 ANKIB1Q9P2G1 1089 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 ATP8A1Q9Y2Q0 1164 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 SKIDA1Q1XH10 827 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 B4GALNT2Q8NHY0 566 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 RAD21L1Q9H4I0 556 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 KANSL1LA0AUZ9 987 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 AP3B1O00203 1094 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 USP14P54578 494 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 FKBP4Q02790 459 aaKnown RBP eCLIP6.58□□□□□ -1.36
LINC02397-201ENST00000504409 PSMD2Q13200 908 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 SFMBT2Q5VUG0 894 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 ZFP1Q6P2D0 407 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 TRIM39Q9HCM9 518 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 ARAP3Q8WWN8 1544 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 LUZP2Q86TE4 346 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 PDPRQ8NCN5 879 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.58□□□□□ -1.36
LINC02397-201ENST00000504409 EMC3Q9P0I2 261 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 EPN1Q9Y6I3 576 aaPredicted RBP6.58□□□□□ -1.36
LINC02397-201ENST00000504409 MATN2O00339 956 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 TRIM68Q6AZZ1 485 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 TRMT44Q8IYL2 757 aaKnown RBP6.58□□□□□ -1.36
LINC02397-201ENST00000504409 DNAJC9Q8WXX5 260 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 DYDC2Q96IM9 177 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 A2ML1A8K2U0 1454 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 PREX2Q70Z35 1606 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 APOA4P06727 396 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 GNL1P36915 607 aaPredicted RBP6.58□□□□□ -1.36
LINC02397-201ENST00000504409 ALCAMQ13740 583 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 LSM14AQ8ND56 463 aaKnown RBP6.58□□□□□ -1.36
LINC02397-201ENST00000504409 ZNF398Q8TD17 642 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 MTERF3Q96E29 417 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 SH3GL2Q99962 352 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 LRRC7Q96NW7 1537 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 AK2P54819 239 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 SPDYAQ5MJ70 313 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 SMYD5Q6GMV2 418 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 ZNF662Q6ZS27 426 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 GPT2Q8TD30 523 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 MTBPQ96DY7 904 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 RMI1Q9H9A7 625 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 LRRC36Q1X8D7 754 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 HIBCHQ6NVY1 386 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms