RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ACVR2BQ13705 512 aa15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 MTFR1Q15390 333 aa15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 SAFBQ15424 915 aaKnown RBP eCLIP15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 INF2Q27J81 1249 aa15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 FOXD4L5Q5VV16 416 aaPredicted RBP15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 ANO1Q5XXA6 986 aa15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 SEPT14Q6ZU15 432 aa15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 VSIG10LQ86VR7 867 aa15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 FAM177A1Q8N128 213 aaPredicted RBP15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 FOXD4L4Q8WXT5 416 aaPredicted RBP15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 UIMC1Q96RL1 719 aa15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 IWS1Q96ST2 819 aa15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 BRMS1Q9HCU9 246 aa15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 MYH7BA7E2Y1 1941 aa15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 CCDC194A0A1B0GVG4 234 aa15.14■□□□□ 0.01
PDLIM7-212ENST00000504380 ZNF865P0CJ78 1059 aaPredicted RBP15.14■□□□□ 0.01
PDLIM7-212ENST00000504380 CYBAP13498 195 aa15.14■□□□□ 0.01
PDLIM7-212ENST00000504380 CNGA1P29973 690 aa15.14■□□□□ 0.01
PDLIM7-212ENST00000504380 SREBF1P36956 1147 aa15.14■□□□□ 0.01
PDLIM7-212ENST00000504380 ARHGAP4P98171 946 aa15.14■□□□□ 0.01
PDLIM7-212ENST00000504380 STXBP2Q15833 593 aa15.14■□□□□ 0.01
PDLIM7-212ENST00000504380 TAPT1Q6NXT6 567 aa15.14■□□□□ 0.01
PDLIM7-212ENST00000504380 KRT25Q7Z3Z0 450 aa15.14■□□□□ 0.01
PDLIM7-212ENST00000504380 MSL3Q8N5Y2 521 aaKnown RBP15.14■□□□□ 0.01
PDLIM7-212ENST00000504380 CYP2W1Q8TAV3 490 aa15.14■□□□□ 0.01
PDLIM7-212ENST00000504380 TBCKQ8TEA7 893 aa15.14■□□□□ 0.01
PDLIM7-212ENST00000504380 LENG1Q96BZ8 264 aaPredicted RBP15.14■□□□□ 0.01
PDLIM7-212ENST00000504380 UNC93B1Q9H1C4 597 aa15.14■□□□□ 0.01
PDLIM7-212ENST00000504380 EHMT1Q9H9B1 1298 aa15.14■□□□□ 0.01
PDLIM7-212ENST00000504380 CNPY2Q9Y2B0 182 aa15.14■□□□□ 0.01
PDLIM7-212ENST00000504380 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-212ENST00000504380 RGS20O76081 388 aa15.13■□□□□ 0.01
PDLIM7-212ENST00000504380 ATP2B1P20020 1258 aa15.13■□□□□ 0.01
PDLIM7-212ENST00000504380 ADCYAP1R1P41586 468 aa15.13■□□□□ 0.01
PDLIM7-212ENST00000504380 GNL2Q13823 731 aaKnown RBP15.13■□□□□ 0.01
PDLIM7-212ENST00000504380 NONOQ15233 471 aaKnown RBP eCLIP15.13■□□□□ 0.01
PDLIM7-212ENST00000504380 HABP4Q5JVS0 413 aaKnown RBP15.13■□□□□ 0.01
PDLIM7-212ENST00000504380 GJC2Q5T442 439 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-212ENST00000504380 MAP3K21Q5TCX8 1036 aa15.13■□□□□ 0.01
PDLIM7-212ENST00000504380 PCNX4Q63HM2 1172 aa15.13■□□□□ 0.01
PDLIM7-212ENST00000504380 FERMT3Q86UX7 667 aa15.13■□□□□ 0.01
PDLIM7-212ENST00000504380 MPHOSPH6Q99547 160 aaKnown RBP15.13■□□□□ 0.01
PDLIM7-212ENST00000504380 B4DLN1 442 aa15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 WNT7AO00755 349 aa15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 ADCY6O43306 1168 aa15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 SORBS3O60504 671 aa15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 EIF3JO75822 258 aaKnown RBP15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 ARIH2O95376 493 aa15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 CCL5P13501 91 aa15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 ZNF76P36508 570 aa15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 PKP1Q13835 747 aa15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 CCDC144BQ3MJ40 725 aa15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 MCTP2Q6DN12 878 aa15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 CRYGNQ8WXF5 182 aa15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 WDR11Q9BZH6 1224 aa15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 FOXP1Q9H334 677 aaPredicted RBP15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 ABHD16BQ9H3Z7 469 aa15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 MTMR6Q9Y217 621 aa15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 UBIAD1Q9Y5Z9 338 aa15.12■□□□□ 0.01
PDLIM7-212ENST00000504380 LOC102724159A0A0B4J2E5 919 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 FAM86B1E9PN63 330 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 STX6O43752 255 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 TDP2O95551 362 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 FAM86B2P0C5J1 330 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 ITGB5P18084 799 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 PDCP20941 246 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 SEMA3FQ13275 785 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 PWP2Q15269 919 aaKnown RBP15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 LY6KQ17RY6 165 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 LETM2Q2VYF4 491 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 TEX2Q8IWB9 1127 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 COPS5Q92905 334 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 ARMC5Q96C12 935 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 ZNF333Q96JL9 665 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 MXRA8Q9BRK3 442 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 BCAS3Q9H6U6 928 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 HMX1Q9NP08 348 aaPredicted RBP15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 VTA1Q9NP79 307 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 PKD2L1Q9P0L9 805 aa15.11■□□□□ 0.01
PDLIM7-212ENST00000504380 KIAA1217Q5T5P2 1943 aa15.1■□□□□ 0.01
PDLIM7-212ENST00000504380 CYP3A4P08684 503 aa15.1■□□□□ 0.01
PDLIM7-212ENST00000504380 ARP10275 920 aa15.1■□□□□ 0.01
PDLIM7-212ENST00000504380 SMPD1P17405 629 aa15.1■□□□□ 0.01
PDLIM7-212ENST00000504380 U2AF2P26368 475 aaKnown RBP eCLIP15.1■□□□□ 0.01
PDLIM7-212ENST00000504380 IRX5P78411 483 aaPredicted RBP15.1■□□□□ 0.01
PDLIM7-212ENST00000504380 NBR1Q14596 966 aa15.1■□□□□ 0.01
PDLIM7-212ENST00000504380 NOSTRINQ8IVI9 506 aa15.1■□□□□ 0.01
PDLIM7-212ENST00000504380 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.1■□□□□ 0.01
PDLIM7-212ENST00000504380 RNF208Q9H0X6 261 aa15.1■□□□□ 0.01
PDLIM7-212ENST00000504380 JADE2Q9NQC1 790 aa15.1■□□□□ 0.01
PDLIM7-212ENST00000504380 FAM184BQ9ULE4 1060 aa15.1■□□□□ 0.01
PDLIM7-212ENST00000504380 RBM47A0AV96 593 aaKnown RBP15.09■□□□□ 0.01
PDLIM7-212ENST00000504380 TXNP10599 105 aaKnown RBP15.09■□□□□ 0.01
PDLIM7-212ENST00000504380 SP2Q02086 613 aa15.09■□□□□ 0.01
PDLIM7-212ENST00000504380 TNFAIP2Q03169 654 aa15.09■□□□□ 0.01
PDLIM7-212ENST00000504380 RESTQ13127 1097 aa15.09■□□□□ 0.01
PDLIM7-212ENST00000504380 PRR16Q569H4 304 aa15.09■□□□□ 0.01
PDLIM7-212ENST00000504380 XRRA1Q6P2D8 792 aa15.09■□□□□ 0.01
PDLIM7-212ENST00000504380 FAM173BQ6P4H8 233 aa15.09■□□□□ 0.01
PDLIM7-212ENST00000504380 NEK8Q86SG6 692 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms