RNA–Protein interactions for RNA: ENST00000504263.1

PCAT4-201, prostate cancer associated transcript 4, humanhuman

TSL 1 (best) BASIC

Gene PCAT4, Length 2,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT4-201ENST00000504263 GNPTABQ3T906 1256 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 MSL1Q68DK7 614 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 BICDL1Q6ZP65 573 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 Q6ZUG5 572 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 CDC37L1Q7L3B6 337 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 OTUD6AQ7L8S5 288 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 TRAPPC11Q7Z392 1133 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 CACNA2D4Q7Z3S7 1137 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 RSPH3Q86UC2 560 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 LMNTD2Q8IXW0 634 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 FMR1NBQ8N0W7 255 aaPredicted RBP3.89□□□□□ -1.79
PCAT4-201ENST00000504263 CACTIN-AS1Q8N1I8 211 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 MREGQ8N565 214 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 MARCH10Q8NA82 808 aaPredicted RBP3.89□□□□□ -1.79
PCAT4-201ENST00000504263 NOA1Q8NC60 698 aaKnown RBP3.89□□□□□ -1.79
PCAT4-201ENST00000504263 SMC1BQ8NDV3 1235 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 PHC3Q8NDX5 983 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 CCDC51Q96ER9 411 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 LTV1Q96GA3 475 aaPredicted RBP3.89□□□□□ -1.79
PCAT4-201ENST00000504263 NAF1Q96HR8 494 aaKnown RBP3.89□□□□□ -1.79
PCAT4-201ENST00000504263 GDAP1L1Q96MZ0 367 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 EYA1Q99502 592 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 RHOXF2Q9BQY4 288 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 MTA3Q9BTC8 594 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 OSBPL1AQ9BXW6 950 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 UBE2OQ9C0C9 1292 aaKnown RBP3.89□□□□□ -1.79
PCAT4-201ENST00000504263 LSG1Q9H089 658 aaKnown RBP3.89□□□□□ -1.79
PCAT4-201ENST00000504263 C1orf115Q9H7X2 142 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 TMEM165Q9HC07 324 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 PUF60Q9UHX1 559 aaKnown RBP3.89□□□□□ -1.79
PCAT4-201ENST00000504263 SLC12A4Q9UP95 1085 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 ADGRG1Q9Y653 693 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 BZW2Q9Y6E2 419 aaKnown RBP3.89□□□□□ -1.79
PCAT4-201ENST00000504263 SBF2Q86WG5 1849 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 BCL9O00512 1426 aa3.89□□□□□ -1.79
PCAT4-201ENST00000504263 CCDC162PA2VCL2 907 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 GMNCA6NCL1 334 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 PSMD14O00487 310 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 IFIT3O14879 490 aaKnown RBP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 SLC27A2O14975 620 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 N4BP3O15049 544 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 ZNF189O75820 626 aaPredicted RBP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 TROVE2P10155 538 aaKnown RBP eCLIP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 HOXA10P31260 410 aaPredicted RBP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 ADD1P35611 737 aaKnown RBP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 CCT6AP40227 531 aaKnown RBP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 USP11P51784 963 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 EPHB4P54760 987 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 MXRA7P84157 204 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 PDCLQ13371 301 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 BYSLQ13895 437 aaKnown RBP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 R3HDM1Q15032 1099 aaKnown RBP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 PUS10Q3MIT2 529 aaKnown RBP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 TTMPQ5BVD1 217 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 PAPD7Q5XG87 772 aaKnown RBP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 SPECC1LQ69YQ0 1117 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 CCDC70Q6NSX1 233 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 GIGYF2Q6Y7W6 1299 aaKnown RBP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 TOGARAM2Q6ZUX3 1019 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 ERICH1Q86X53 443 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 MMGT1Q8N4V1 131 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 STKLD1Q8NE28 680 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 ZC3H15Q8WU90 426 aaKnown RBP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 SPIRE2Q8WWL2 714 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 RIN2Q8WYP3 895 aaPredicted RBP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 KIFAP3Q92845 792 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 ZNF653Q96CK0 615 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 MAML3Q96JK9 1138 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 VCXQ9H320 206 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 GGNBP2Q9H3C7 697 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 DDX21Q9NR30 783 aaKnown RBP eCLIP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 TUBE1Q9UJT0 475 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 MAPK8IP1Q9UQF2 711 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 NEDD4P46934 1319 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 MAP3K19Q56UN5 1328 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 TNS1Q9HBL0 1735 aaKnown RBP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 ANKRD26Q9UPS8 1709 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 SCO2A0A1W2PP80 73 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 PHF20L1A8MW92 1017 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 BTBD19C9JJ37 291 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 DPYSL4O14531 572 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 TRAPPC3O43617 180 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 USO1O60763 962 aaKnown RBP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 HSF2BPO75031 334 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 CFHP08603 1231 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 ACADSP16219 412 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 ATP6V1C1P21283 382 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 FBLN1P23142 703 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 HOXC9P31274 260 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 MTHFSP49914 203 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 OXCT1P55809 520 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 HDAC4P56524 1084 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 HDLBPQ00341 1268 aaKnown RBP3.88□□□□□ -1.79
PCAT4-201ENST00000504263 MYL5Q02045 173 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 ADCY1Q08828 1119 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 ADAM9Q13443 819 aa3.88□□□□□ -1.79
PCAT4-201ENST00000504263 ITIH4Q14624 930 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms