RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 PDXDC1Q6P996 788 aa16.6■□□□□ 0.25
SNF8-203ENST00000504000 FOXR1Q6PIV2 292 aa16.6■□□□□ 0.25
SNF8-203ENST00000504000 NOX5Q96PH1 765 aa16.6■□□□□ 0.25
SNF8-203ENST00000504000 PNMA5Q96PV4 448 aa16.6■□□□□ 0.25
SNF8-203ENST00000504000 TSG101Q99816 390 aa16.6■□□□□ 0.25
SNF8-203ENST00000504000 LRRC1Q9BTT6 524 aa16.6■□□□□ 0.25
SNF8-203ENST00000504000 LUC7LQ9NQ29 371 aaKnown RBP16.6■□□□□ 0.25
SNF8-203ENST00000504000 SNED1Q8TER0 1413 aa16.6■□□□□ 0.25
SNF8-203ENST00000504000 ZMYND10O75800 440 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 APBA1Q02410 837 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 EFCAB13Q8IY85 973 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 PPM1EQ8WY54 764 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 RAD54LQ92698 747 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 EYA3Q99504 573 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 TRIM34Q9BYJ4 488 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 RSPH14Q9UHP6 348 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 DMGDHQ9UI17 866 aaKnown RBP16.59■□□□□ 0.25
SNF8-203ENST00000504000 SPATA31A5Q5VU36 1347 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 SPATA31A7Q8IWB4 1347 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 DDX60LQ5H9U9 1706 aaKnown RBP16.59■□□□□ 0.25
SNF8-203ENST00000504000 LRRC53A6NM62 1247 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 EPHB6O15197 1021 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 SLC26A4O43511 780 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 MOCS3O95396 460 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 GNA14O95837 355 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 PLCG2P16885 1265 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 CDK8P49336 464 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 CALCRLQ16602 461 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 CCDC181Q5TID7 509 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 HGSNATQ68CP4 663 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 PPP4R3AQ6IN85 833 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 NBPF5PQ86XG9 351 aaPredicted RBP16.59■□□□□ 0.25
SNF8-203ENST00000504000 POTEDQ86YR6 584 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 TGFBRAP1Q8WUH2 860 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 EEF2KMTQ96G04 330 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 RTFDC1Q9BY42 306 aaPredicted RBP16.59■□□□□ 0.25
SNF8-203ENST00000504000 MMRN2Q9H8L6 949 aa16.59■□□□□ 0.25
SNF8-203ENST00000504000 FAM207AQ9NSI2 230 aaPredicted RBP16.59■□□□□ 0.25
SNF8-203ENST00000504000 TNRC6CQ9HCJ0 1690 aaKnown RBP16.58■□□□□ 0.24
SNF8-203ENST00000504000 NKRFO15226 690 aaKnown RBP eCLIP16.58■□□□□ 0.24
SNF8-203ENST00000504000 CPP00450 1065 aa16.58■□□□□ 0.24
SNF8-203ENST00000504000 GOLGA8HP0CJ92 632 aa16.58■□□□□ 0.24
SNF8-203ENST00000504000 IRAK1P51617 712 aa16.58■□□□□ 0.24
SNF8-203ENST00000504000 MARSP56192 900 aaKnown RBP16.58■□□□□ 0.24
SNF8-203ENST00000504000 SKOR1P84550 965 aa16.58■□□□□ 0.24
SNF8-203ENST00000504000 CFAP221Q4G0U5 840 aa16.58■□□□□ 0.24
SNF8-203ENST00000504000 TMEM119Q4V9L6 283 aa16.58■□□□□ 0.24
SNF8-203ENST00000504000 EMC10Q5UCC4 262 aa16.58■□□□□ 0.24
SNF8-203ENST00000504000 HAUS3Q68CZ6 603 aa16.58■□□□□ 0.24
SNF8-203ENST00000504000 PPP1R18Q6NYC8 613 aa16.58■□□□□ 0.24
SNF8-203ENST00000504000 SND1Q7KZF4 910 aaKnown RBP eCLIP16.58■□□□□ 0.24
SNF8-203ENST00000504000 RRAGAQ7L523 313 aa16.58■□□□□ 0.24
SNF8-203ENST00000504000 C1orf131Q8NDD1 294 aaKnown RBP16.58■□□□□ 0.24
SNF8-203ENST00000504000 RIN2Q8WYP3 895 aaPredicted RBP16.58■□□□□ 0.24
SNF8-203ENST00000504000 CDK5RAP3Q96JB5 506 aa16.58■□□□□ 0.24
SNF8-203ENST00000504000 TLR10Q9BXR5 811 aa16.58■□□□□ 0.24
SNF8-203ENST00000504000 MLXIPQ9HAP2 919 aa16.58■□□□□ 0.24
SNF8-203ENST00000504000 CEP72Q9P209 647 aa16.58■□□□□ 0.24
SNF8-203ENST00000504000 GPR75-ASB3A0A0A6YYF3 556 aa16.57■□□□□ 0.24
SNF8-203ENST00000504000 A0A0G2JS52 829 aa16.57■□□□□ 0.24
SNF8-203ENST00000504000 GRID2IPA4D2P6 1211 aa16.57■□□□□ 0.24
SNF8-203ENST00000504000 RPS6KA4O75676 772 aa16.57■□□□□ 0.24
SNF8-203ENST00000504000 TXKP42681 527 aa16.57■□□□□ 0.24
SNF8-203ENST00000504000 FKBP3Q00688 224 aaKnown RBP16.57■□□□□ 0.24
SNF8-203ENST00000504000 SLC9C1Q4G0N8 1177 aa16.57■□□□□ 0.24
SNF8-203ENST00000504000 ZCWPW2Q504Y3 356 aa16.57■□□□□ 0.24
SNF8-203ENST00000504000 KRT79Q5XKE5 535 aa16.57■□□□□ 0.24
SNF8-203ENST00000504000 ZNF804AQ7Z570 1209 aa16.57■□□□□ 0.24
SNF8-203ENST00000504000 SLC44A5Q8NCS7 719 aa16.57■□□□□ 0.24
SNF8-203ENST00000504000 SMCR8Q8TEV9 937 aaPredicted RBP16.57■□□□□ 0.24
SNF8-203ENST00000504000 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.57■□□□□ 0.24
SNF8-203ENST00000504000 FAM163AQ96GL9 167 aaPredicted RBP16.57■□□□□ 0.24
SNF8-203ENST00000504000 CEP63Q96MT8 703 aa16.57■□□□□ 0.24
SNF8-203ENST00000504000 PLIN4Q96Q06 1357 aa16.57■□□□□ 0.24
SNF8-203ENST00000504000 SERPING1P05155 500 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 KLHDC7AQ5VTJ3 777 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 BICDL1Q6ZP65 573 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 CACNA2D4Q7Z3S7 1137 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 IFT20Q8IY31 132 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 MREGQ8N565 214 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 HDAC7Q8WUI4 952 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 PIGSQ96S52 555 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 GDF3Q9NR23 364 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 CES2O00748 559 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 ASPRV1Q53RT3 343 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 HYIQ5T013 277 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 C8orf74Q6P047 294 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 NFRKBQ6P4R8 1299 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 USP17L2Q6R6M4 530 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 GSPT2Q8IYD1 628 aaKnown RBP16.56■□□□□ 0.24
SNF8-203ENST00000504000 MYOCDQ8IZQ8 938 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 EIF1ADQ8N9N8 165 aaKnown RBP16.56■□□□□ 0.24
SNF8-203ENST00000504000 HPS3Q969F9 1004 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 CAPS2Q9BXY5 557 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 BIN2Q9UBW5 565 aaPredicted RBP16.56■□□□□ 0.24
SNF8-203ENST00000504000 COL4A3BPQ9Y5P4 624 aa16.56■□□□□ 0.24
SNF8-203ENST00000504000 SBF2Q86WG5 1849 aa16.55■□□□□ 0.24
SNF8-203ENST00000504000 A0A087WUV0 522 aaPredicted RBP16.55■□□□□ 0.24
SNF8-203ENST00000504000 KCNMA1Q12791 1236 aa16.55■□□□□ 0.24
SNF8-203ENST00000504000 DIXDC1Q155Q3 683 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms