RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 PTPRAP18433 802 aa20.47■□□□□ 0.87
LINC00535-201ENST00000501400 STAT3P40763 770 aa20.47■□□□□ 0.87
LINC00535-201ENST00000501400 SPP2Q13103 211 aa20.47■□□□□ 0.87
LINC00535-201ENST00000501400 PAK1Q13153 545 aa20.47■□□□□ 0.87
LINC00535-201ENST00000501400 SEMA3FQ13275 785 aa20.47■□□□□ 0.87
LINC00535-201ENST00000501400 LRRC8AQ8IWT6 810 aa20.47■□□□□ 0.87
LINC00535-201ENST00000501400 SLFN12Q8IYM2 578 aa20.47■□□□□ 0.87
LINC00535-201ENST00000501400 ADSSL1Q8N142 457 aa20.47■□□□□ 0.87
LINC00535-201ENST00000501400 GIMAP8Q8ND71 665 aaPredicted RBP20.47■□□□□ 0.87
LINC00535-201ENST00000501400 HOOK2Q96ED9 719 aa20.47■□□□□ 0.87
LINC00535-201ENST00000501400 IMPACTQ9P2X3 320 aa20.47■□□□□ 0.87
LINC00535-201ENST00000501400 RWDD2AQ9UIY3 292 aa20.47■□□□□ 0.87
LINC00535-201ENST00000501400 CCPG1Q9ULG6 757 aa20.47■□□□□ 0.87
LINC00535-201ENST00000501400 OTOFQ9HC10 1997 aa20.46■□□□□ 0.87
LINC00535-201ENST00000501400 CBFA2T2O43439 604 aa20.46■□□□□ 0.87
LINC00535-201ENST00000501400 COBLO75128 1261 aa20.46■□□□□ 0.87
LINC00535-201ENST00000501400 DHX8Q14562 1220 aaKnown RBP20.46■□□□□ 0.87
LINC00535-201ENST00000501400 KLRG1Q96E93 195 aa20.46■□□□□ 0.87
LINC00535-201ENST00000501400 TANGO6Q9C0B7 1094 aa20.46■□□□□ 0.87
LINC00535-201ENST00000501400 SLC38A10Q9HBR0 1119 aa20.46■□□□□ 0.87
LINC00535-201ENST00000501400 RNF181Q9P0P0 153 aa20.46■□□□□ 0.87
LINC00535-201ENST00000501400 MAPK8IP1Q9UQF2 711 aa20.46■□□□□ 0.87
LINC00535-201ENST00000501400 COL11A1P12107 1806 aaPredicted RBP20.46■□□□□ 0.87
LINC00535-201ENST00000501400 MYMKA6NI61 221 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 MSH4O15457 936 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 BACE1P56817 501 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 ASIC1P78348 528 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 SV2BQ7L1I2 683 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 NELFBQ8WX92 580 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 CLEC4DQ8WXI8 215 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 RPAP3Q9H6T3 665 aaPredicted RBP20.45■□□□□ 0.86
LINC00535-201ENST00000501400 PPP1R9AQ9ULJ8 1098 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 PITPNM2Q9BZ72 1349 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 HSD17B4P51659 736 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 USP14P54578 494 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 AMPD3Q01432 767 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 PTPN21Q16825 1174 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 VSTM4Q8IW00 320 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 ZNF280CQ8ND82 737 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 VAV3Q9UKW4 847 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 KDM3AQ9Y4C1 1321 aa20.45■□□□□ 0.86
LINC00535-201ENST00000501400 NFIBO00712 420 aa20.44■□□□□ 0.86
LINC00535-201ENST00000501400 FLOT1O75955 427 aa20.44■□□□□ 0.86
LINC00535-201ENST00000501400 CCT6AP40227 531 aaKnown RBP20.44■□□□□ 0.86
LINC00535-201ENST00000501400 FAM20AQ96MK3 541 aa20.44■□□□□ 0.86
LINC00535-201ENST00000501400 PICK1Q9NRD5 415 aa20.44■□□□□ 0.86
LINC00535-201ENST00000501400 POTEB3A0JP26 581 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 POTECB2RU33 542 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 GSDMDP57764 484 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 CCZ1BP86790 482 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 CCZ1P86791 482 aaPredicted RBP20.43■□□□□ 0.86
LINC00535-201ENST00000501400 GHRHRQ02643 423 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 ARMCX5Q6P1M9 558 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 CNNM4Q6P4Q7 775 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 POTEBQ6S5H4 581 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 SPTLC3Q9NUV7 552 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 EXOC1Q9NV70 894 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 COL20A1Q9P218 1284 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 MED24O75448 989 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 CDK11BP21127 795 aaKnown RBP20.43■□□□□ 0.86
LINC00535-201ENST00000501400 PMS1P54277 932 aaKnown RBP20.43■□□□□ 0.86
LINC00535-201ENST00000501400 UBXN2AP68543 259 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 PDE4DQ08499 809 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 NOL9Q5SY16 702 aaKnown RBP20.43■□□□□ 0.86
LINC00535-201ENST00000501400 DLK2Q6UY11 383 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 WNK4Q96J92 1243 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 C12orf42Q96LP6 360 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 AS3MTQ9HBK9 375 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 RAVER2Q9HCJ3 691 aaKnown RBP20.43■□□□□ 0.86
LINC00535-201ENST00000501400 ADARB2Q9NS39 739 aaKnown RBP20.43■□□□□ 0.86
LINC00535-201ENST00000501400 PTPRFP10586 1907 aa20.43■□□□□ 0.86
LINC00535-201ENST00000501400 A0A1B0GTH6 734 aa20.42■□□□□ 0.86
LINC00535-201ENST00000501400 TRIM49BA6NDI0 452 aa20.42■□□□□ 0.86
LINC00535-201ENST00000501400 SLC26A4O43511 780 aa20.42■□□□□ 0.86
LINC00535-201ENST00000501400 FCER1AP12319 257 aa20.42■□□□□ 0.86
LINC00535-201ENST00000501400 STK4Q13043 487 aa20.42■□□□□ 0.86
LINC00535-201ENST00000501400 KIAA0895Q8NCT3 520 aa20.42■□□□□ 0.86
LINC00535-201ENST00000501400 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.42■□□□□ 0.86
LINC00535-201ENST00000501400 NT5C3AQ9H0P0 336 aa20.42■□□□□ 0.86
LINC00535-201ENST00000501400 RPTORQ8N122 1335 aa20.41■□□□□ 0.86
LINC00535-201ENST00000501400 ZNF76P36508 570 aa20.41■□□□□ 0.86
LINC00535-201ENST00000501400 NOLC1Q14978 699 aaKnown RBP eCLIP20.41■□□□□ 0.86
LINC00535-201ENST00000501400 UNC13DQ70J99 1090 aa20.41■□□□□ 0.86
LINC00535-201ENST00000501400 CPXCR1Q8N123 301 aa20.41■□□□□ 0.86
LINC00535-201ENST00000501400 HPS3Q969F9 1004 aa20.41■□□□□ 0.86
LINC00535-201ENST00000501400 ZHX2Q9Y6X8 837 aa20.41■□□□□ 0.86
LINC00535-201ENST00000501400 HMGCS2P54868 508 aa20.41■□□□□ 0.86
LINC00535-201ENST00000501400 MUM1L1Q5H9M0 696 aa20.41■□□□□ 0.86
LINC00535-201ENST00000501400 NCAPH2Q6IBW4 605 aa20.41■□□□□ 0.86
LINC00535-201ENST00000501400 DYMQ7RTS9 669 aa20.41■□□□□ 0.86
LINC00535-201ENST00000501400 ATG4CQ96DT6 458 aa20.41■□□□□ 0.86
LINC00535-201ENST00000501400 KIAA1024Q9UPX6 916 aa20.41■□□□□ 0.86
LINC00535-201ENST00000501400 POTEFA5A3E0 1075 aa20.4■□□□□ 0.86
LINC00535-201ENST00000501400 E9PMD0 336 aa20.4■□□□□ 0.86
LINC00535-201ENST00000501400 POTEIP0CG38 1075 aa20.4■□□□□ 0.86
LINC00535-201ENST00000501400 EHHADHQ08426 723 aa20.4■□□□□ 0.86
LINC00535-201ENST00000501400 NR1I3Q14994 352 aa20.4■□□□□ 0.86
LINC00535-201ENST00000501400 COBLL1Q53SF7 1204 aa20.4■□□□□ 0.86
LINC00535-201ENST00000501400 HAUS3Q68CZ6 603 aa20.4■□□□□ 0.86
LINC00535-201ENST00000501400 POTEGQ6S5H5 508 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms