RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 SH3GLB2Q9NR46 395 aa19.22■□□□□ 0.67
PRKCB-210ENST00000498739 TMEM260Q9NX78 707 aa19.22■□□□□ 0.67
PRKCB-210ENST00000498739 ADAMTS4O75173 837 aa19.21■□□□□ 0.67
PRKCB-210ENST00000498739 C6orf222P0C671 652 aaPredicted RBP19.21■□□□□ 0.67
PRKCB-210ENST00000498739 TXNP10599 105 aaKnown RBP19.21■□□□□ 0.67
PRKCB-210ENST00000498739 PTGS1P23219 599 aa19.21■□□□□ 0.67
PRKCB-210ENST00000498739 GNA11P29992 359 aa19.21■□□□□ 0.67
PRKCB-210ENST00000498739 NLRP5P59047 1200 aa19.21■□□□□ 0.67
PRKCB-210ENST00000498739 TTLL4Q14679 1199 aa19.21■□□□□ 0.67
PRKCB-210ENST00000498739 DUSP28Q4G0W2 176 aa19.21■□□□□ 0.67
PRKCB-210ENST00000498739 TLK2Q86UE8 772 aa19.21■□□□□ 0.67
PRKCB-210ENST00000498739 NSUN7Q8NE18 718 aaKnown RBP19.21■□□□□ 0.67
PRKCB-210ENST00000498739 IL27Q8NEV9 243 aa19.21■□□□□ 0.67
PRKCB-210ENST00000498739 C11orf49Q9H6J7 331 aa19.21■□□□□ 0.67
PRKCB-210ENST00000498739 ORC3Q9UBD5 711 aaPredicted RBP19.21■□□□□ 0.67
PRKCB-210ENST00000498739 GNEQ9Y223 722 aaKnown RBP19.21■□□□□ 0.67
PRKCB-210ENST00000498739 BRCA2P51587 3418 aa19.21■□□□□ 0.66
PRKCB-210ENST00000498739 DYNC1LI2O43237 492 aaPredicted RBP19.2■□□□□ 0.66
PRKCB-210ENST00000498739 ARIH2O95376 493 aa19.2■□□□□ 0.66
PRKCB-210ENST00000498739 FOSP01100 380 aaPredicted RBP19.2■□□□□ 0.66
PRKCB-210ENST00000498739 CLK2P49760 499 aaKnown RBP19.2■□□□□ 0.66
PRKCB-210ENST00000498739 GJA9P57773 515 aa19.2■□□□□ 0.66
PRKCB-210ENST00000498739 IRX5P78411 483 aaPredicted RBP19.2■□□□□ 0.66
PRKCB-210ENST00000498739 AP3B2Q13367 1082 aa19.2■□□□□ 0.66
PRKCB-210ENST00000498739 JAKMIP3Q5VZ66 844 aa19.2■□□□□ 0.66
PRKCB-210ENST00000498739 PCNX4Q63HM2 1172 aa19.2■□□□□ 0.66
PRKCB-210ENST00000498739 ANO3Q9BYT9 981 aa19.2■□□□□ 0.66
PRKCB-210ENST00000498739 AP5M1Q9H0R1 490 aa19.2■□□□□ 0.66
PRKCB-210ENST00000498739 SH2B1Q9NRF2 756 aaPredicted RBP19.2■□□□□ 0.66
PRKCB-210ENST00000498739 RTEL1Q9NZ71 1219 aa19.2■□□□□ 0.66
PRKCB-210ENST00000498739 MRVI1Q9Y6F6 885 aa19.2■□□□□ 0.66
PRKCB-210ENST00000498739 KIAA0100Q14667 2235 aaKnown RBP19.2■□□□□ 0.66
PRKCB-210ENST00000498739 MYADML2A6NDP7 307 aa19.19■□□□□ 0.66
PRKCB-210ENST00000498739 ADAMTS3O15072 1205 aa19.19■□□□□ 0.66
PRKCB-210ENST00000498739 NKRFO15226 690 aaKnown RBP eCLIP19.19■□□□□ 0.66
PRKCB-210ENST00000498739 JAK2O60674 1132 aa19.19■□□□□ 0.66
PRKCB-210ENST00000498739 RGS20O76081 388 aa19.19■□□□□ 0.66
PRKCB-210ENST00000498739 MRPS9P82933 396 aaKnown RBP19.19■□□□□ 0.66
PRKCB-210ENST00000498739 REXO1Q8N1G1 1221 aaKnown RBP19.19■□□□□ 0.66
PRKCB-210ENST00000498739 BICD2Q8TD16 824 aa19.19■□□□□ 0.66
PRKCB-210ENST00000498739 WASF1Q92558 559 aa19.19■□□□□ 0.66
PRKCB-210ENST00000498739 COPS5Q92905 334 aa19.19■□□□□ 0.66
PRKCB-210ENST00000498739 UPF3AQ9H1J1 476 aaKnown RBP19.19■□□□□ 0.66
PRKCB-210ENST00000498739 STAM2O75886 525 aa19.18■□□□□ 0.66
PRKCB-210ENST00000498739 CD2BP2O95400 341 aaKnown RBP19.18■□□□□ 0.66
PRKCB-210ENST00000498739 FDPSP14324 419 aaKnown RBP19.18■□□□□ 0.66
PRKCB-210ENST00000498739 XBP1P17861 261 aa19.18■□□□□ 0.66
PRKCB-210ENST00000498739 BEX3Q00994 111 aa19.18■□□□□ 0.66
PRKCB-210ENST00000498739 LY6KQ17RY6 165 aa19.18■□□□□ 0.66
PRKCB-210ENST00000498739 GNPTABQ3T906 1256 aa19.18■□□□□ 0.66
PRKCB-210ENST00000498739 XRRA1Q6P2D8 792 aa19.18■□□□□ 0.66
PRKCB-210ENST00000498739 CCDC62Q6P9F0 684 aa19.18■□□□□ 0.66
PRKCB-210ENST00000498739 KLHDC9Q8NEP7 349 aa19.18■□□□□ 0.66
PRKCB-210ENST00000498739 OR6J1Q8NGC5 347 aa19.18■□□□□ 0.66
PRKCB-210ENST00000498739 RASGRP4Q8TDF6 673 aa19.18■□□□□ 0.66
PRKCB-210ENST00000498739 ALG1Q9BT22 464 aa19.18■□□□□ 0.66
PRKCB-210ENST00000498739 SENP6Q9GZR1 1112 aaPredicted RBP19.18■□□□□ 0.66
PRKCB-210ENST00000498739 Q9Y3F1 56 aa19.18■□□□□ 0.66
PRKCB-210ENST00000498739 COL6A1P12109 1028 aa19.17■□□□□ 0.66
PRKCB-210ENST00000498739 CST5P28325 142 aaPredicted RBP19.17■□□□□ 0.66
PRKCB-210ENST00000498739 KCNA10Q16322 511 aa19.17■□□□□ 0.66
PRKCB-210ENST00000498739 GNASQ5JWF2 1037 aa19.17■□□□□ 0.66
PRKCB-210ENST00000498739 MCTP2Q6DN12 878 aa19.17■□□□□ 0.66
PRKCB-210ENST00000498739 FERMT2Q96AC1 680 aa19.17■□□□□ 0.66
PRKCB-210ENST00000498739 INPP4AQ96PE3 977 aaPredicted RBP19.17■□□□□ 0.66
PRKCB-210ENST00000498739 HTATIP2Q9BUP3 242 aa19.17■□□□□ 0.66
PRKCB-210ENST00000498739 DDX41Q9UJV9 622 aaKnown RBP19.17■□□□□ 0.66
PRKCB-210ENST00000498739 PCDHA4Q9UN74 947 aa19.17■□□□□ 0.66
PRKCB-210ENST00000498739 KCNJ14Q9UNX9 436 aa19.17■□□□□ 0.66
PRKCB-210ENST00000498739 CTAGE5O15320 804 aa19.16■□□□□ 0.66
PRKCB-210ENST00000498739 MCM2P49736 904 aa19.16■□□□□ 0.66
PRKCB-210ENST00000498739 NKX3-2P78367 333 aa19.16■□□□□ 0.66
PRKCB-210ENST00000498739 KCNV1Q6PIU1 500 aa19.16■□□□□ 0.66
PRKCB-210ENST00000498739 NLRX1Q86UT6 975 aa19.16■□□□□ 0.66
PRKCB-210ENST00000498739 FAM177A1Q8N128 213 aaPredicted RBP19.16■□□□□ 0.66
PRKCB-210ENST00000498739 PCSK9Q8NBP7 692 aaKnown RBP19.16■□□□□ 0.66
PRKCB-210ENST00000498739 LLPHQ9BRT6 129 aaKnown RBP19.16■□□□□ 0.66
PRKCB-210ENST00000498739 TSEN34Q9BSV6 310 aaKnown RBP19.16■□□□□ 0.66
PRKCB-210ENST00000498739 GJB4Q9NTQ9 266 aa19.16■□□□□ 0.66
PRKCB-210ENST00000498739 PHF24Q9UPV7 400 aa19.16■□□□□ 0.66
PRKCB-210ENST00000498739 MOXD2PA6NHM9 499 aa19.15■□□□□ 0.66
PRKCB-210ENST00000498739 FIBPO43427 364 aa19.15■□□□□ 0.66
PRKCB-210ENST00000498739 GH1P01241 217 aa19.15■□□□□ 0.66
PRKCB-210ENST00000498739 ASGR1P07306 291 aa19.15■□□□□ 0.66
PRKCB-210ENST00000498739 SREBF1P36956 1147 aa19.15■□□□□ 0.66
PRKCB-210ENST00000498739 ACLYP53396 1101 aa19.15■□□□□ 0.66
PRKCB-210ENST00000498739 FOSBP53539 338 aa19.15■□□□□ 0.66
PRKCB-210ENST00000498739 FSCN1Q16658 493 aaKnown RBP19.15■□□□□ 0.66
PRKCB-210ENST00000498739 CCSAPQ6IQ19 270 aaPredicted RBP19.15■□□□□ 0.66
PRKCB-210ENST00000498739 BLIDQ8IZY5 108 aa19.15■□□□□ 0.66
PRKCB-210ENST00000498739 TMX3Q96JJ7 454 aa19.15■□□□□ 0.66
PRKCB-210ENST00000498739 PHF20Q9BVI0 1012 aa19.15■□□□□ 0.66
PRKCB-210ENST00000498739 KIAA1217Q5T5P2 1943 aa19.14■□□□□ 0.65
PRKCB-210ENST00000498739 A0A1W2PQ45 241 aaPredicted RBP19.14■□□□□ 0.65
PRKCB-210ENST00000498739 A0A1W2PQY0 241 aa19.14■□□□□ 0.65
PRKCB-210ENST00000498739 ZEB2O60315 1214 aa19.14■□□□□ 0.65
PRKCB-210ENST00000498739 SORBS3O60504 671 aa19.14■□□□□ 0.65
PRKCB-210ENST00000498739 TGFB3P10600 412 aa19.14■□□□□ 0.65
PRKCB-210ENST00000498739 UBA1P22314 1058 aaKnown RBP19.14■□□□□ 0.65
PRKCB-210ENST00000498739 ICAM3P32942 547 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms