RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, human

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNC-208	ENST00000498724	MIGA1	Q8NAN2	632 aa		4.95	□□□□□ -1.62
TNC-208	ENST00000498724	TRIM58	Q8NG06	486 aa		4.95	□□□□□ -1.62
TNC-208	ENST00000498724	HELB	Q8NG08	1087 aa	Predicted RBP	4.95	□□□□□ -1.62
TNC-208	ENST00000498724	TNFRSF25	Q93038	417 aa		4.95	□□□□□ -1.62
TNC-208	ENST00000498724	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.95	□□□□□ -1.62
TNC-208	ENST00000498724	ALS2CR12	Q96Q35	445 aa		4.95	□□□□□ -1.62
TNC-208	ENST00000498724	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	4.95	□□□□□ -1.62
TNC-208	ENST00000498724	NCAPG	Q9BPX3	1015 aa		4.95	□□□□□ -1.62
TNC-208	ENST00000498724	TMEM134	Q9H6X4	195 aa		4.95	□□□□□ -1.62
TNC-208	ENST00000498724	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.95	□□□□□ -1.62
TNC-208	ENST00000498724	JADE2	Q9NQC1	790 aa		4.95	□□□□□ -1.62
TNC-208	ENST00000498724	CCDC87	Q9NVE4	849 aa		4.95	□□□□□ -1.62
TNC-208	ENST00000498724	LRP2BP	Q9P2M1	347 aa		4.95	□□□□□ -1.62
TNC-208	ENST00000498724	TRMT112	Q9UI30	125 aa	Known RBP	4.95	□□□□□ -1.62
TNC-208	ENST00000498724	SNX12	Q9UMY4	172 aa		4.95	□□□□□ -1.62
TNC-208	ENST00000498724	TFR2	Q9UP52	801 aa		4.95	□□□□□ -1.62
TNC-208	ENST00000498724	MAPK8IP1	Q9UQF2	711 aa		4.95	□□□□□ -1.62
TNC-208	ENST00000498724	HYOU1	Q9Y4L1	999 aa		4.95	□□□□□ -1.62
TNC-208	ENST00000498724	CNTNAP5	Q8WYK1	1306 aa		4.95	□□□□□ -1.62
TNC-208	ENST00000498724	ATXN2	Q99700	1313 aa	Known RBP	4.95	□□□□□ -1.62
TNC-208	ENST00000498724	MYH6	P13533	1939 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	MYH8	P13535	1937 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	CEP350	Q5VT06	3117 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	MAGEB6P1	A0A0J9YX57	407 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724		A0A1W2PQJ5	194 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724		H0YHG0	523 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	AGPS	O00116	658 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	PDE2A	O00408	941 aa	Predicted RBP	4.94	□□□□□ -1.62
TNC-208	ENST00000498724	WNT7A	O00755	349 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	ZNF185	O15231	689 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	STARD3NL	O95772	234 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	MYL1	P05976	194 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	MYBL2	P10244	700 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	EPB41	P11171	864 aa	Known RBP	4.94	□□□□□ -1.62
TNC-208	ENST00000498724	PC	P11498	1178 aa	Known RBP	4.94	□□□□□ -1.62
TNC-208	ENST00000498724	SCG2	P13521	617 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	GYS1	P13807	737 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	CALML3	P27482	149 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	TNFRSF8	P28908	595 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	PPP1R2	P41236	205 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	PAFAH1B1	P43034	410 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	MATR3	P43243	847 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
TNC-208	ENST00000498724	MNAT1	P51948	309 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	EPHB4	P54760	987 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	SKOR1	P84550	965 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	CDK17	Q00537	523 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	ITIH3	Q06033	890 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	TBC1D8B	Q0IIM8	1120 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	FUT2	Q10981	343 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	NNT	Q13423	1086 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	SWT1	Q5T5J6	900 aa	Known RBP	4.94	□□□□□ -1.62
TNC-208	ENST00000498724	RC3H1	Q5TC82	1133 aa	Known RBP	4.94	□□□□□ -1.62
TNC-208	ENST00000498724	DMRTA1	Q5VZB9	504 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.94	□□□□□ -1.62
TNC-208	ENST00000498724	C8orf74	Q6P047	294 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	WDR59	Q6PJI9	974 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.94	□□□□□ -1.62
TNC-208	ENST00000498724	IQCA1	Q86XH1	822 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	SYNE4	Q8N205	404 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	CSGALNACT2	Q8N6G5	542 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	CCDC155	Q8N6L0	562 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	OTUD6B	Q8N6M0	293 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	ENAH	Q8N8S7	591 aa	Predicted RBP	4.94	□□□□□ -1.62
TNC-208	ENST00000498724	ZNF507	Q8TCN5	953 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	BCAS4	Q8TDM0	211 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	P2RX5	Q93086	422 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	CAVIN3	Q969G5	261 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	SHISA4	Q96DD7	197 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	CNOT6L	Q96LI5	555 aa	Known RBP	4.94	□□□□□ -1.62
TNC-208	ENST00000498724	CCDC42	Q96M95	316 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	PURB	Q96QR8	312 aa	Known RBP	4.94	□□□□□ -1.62
TNC-208	ENST00000498724	CEP89	Q96ST8	783 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	SH3GL2	Q99962	352 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	TUBGCP2	Q9BSJ2	902 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	LACRT	Q9GZZ8	138 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	KDM4C	Q9H3R0	1056 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	SH2D4A	Q9H788	454 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	MAGEF1	Q9HAY2	307 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	4.94	□□□□□ -1.62
TNC-208	ENST00000498724	PIM2	Q9P1W9	311 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	LRWD1	Q9UFC0	647 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	SRP68	Q9UHB9	627 aa	Known RBP	4.94	□□□□□ -1.62
TNC-208	ENST00000498724	ANAPC4	Q9UJX5	808 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	DOCK2	Q92608	1830 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	UBR3	Q6ZT12	1888 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	GRIN2D	O15399	1336 aa		4.94	□□□□□ -1.62
TNC-208	ENST00000498724	CCDC194	A0A1B0GVG4	234 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	NDUFAB1	O14561	156 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	AKR1B10	O60218	316 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	TOMM70	O94826	608 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	CLSTN1	O94985	981 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	MOCS3	O95396	460 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	PRLR	P16471	622 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	KCNA3	P22001	575 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	CCNE1	P24864	410 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	HNRNPH1	P31943	449 aa	Known RBP	4.93	□□□□□ -1.62
TNC-208	ENST00000498724	SSTR3	P32745	418 aa	Predicted RBP	4.93	□□□□□ -1.62
TNC-208	ENST00000498724	KIF5B	P33176	963 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	UBA7	P41226	1012 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	CRKL	P46109	303 aa	Known RBP	4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms