RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 TRMT13Q9NUP7 481 aaKnown RBP18.63■□□□□ 0.57
NR1H3-227ENST00000498548 MAP3K20Q9NYL2 800 aaKnown RBP18.63■□□□□ 0.57
NR1H3-227ENST00000498548 DDX41Q9UJV9 622 aaKnown RBP18.63■□□□□ 0.57
NR1H3-227ENST00000498548 RGS20O76081 388 aa18.62■□□□□ 0.57
NR1H3-227ENST00000498548 CALM1P0DP23 149 aa18.62■□□□□ 0.57
NR1H3-227ENST00000498548 CALM2P0DP24 149 aa18.62■□□□□ 0.57
NR1H3-227ENST00000498548 CALM3P0DP25 149 aa18.62■□□□□ 0.57
NR1H3-227ENST00000498548 CSF2RAP15509 400 aa18.62■□□□□ 0.57
NR1H3-227ENST00000498548 GNAQP50148 359 aa18.62■□□□□ 0.57
NR1H3-227ENST00000498548 CCL23P55773 120 aa18.62■□□□□ 0.57
NR1H3-227ENST00000498548 BRDTQ58F21 947 aaPredicted RBP18.62■□□□□ 0.57
NR1H3-227ENST00000498548 VSIG10LQ86VR7 867 aa18.62■□□□□ 0.57
NR1H3-227ENST00000498548 SAMD3Q8N6K7 520 aa18.62■□□□□ 0.57
NR1H3-227ENST00000498548 FANCBQ8NB91 859 aa18.62■□□□□ 0.57
NR1H3-227ENST00000498548 GPKOWQ92917 476 aaPredicted RBP eCLIP18.62■□□□□ 0.57
NR1H3-227ENST00000498548 LZTS2Q9BRK4 669 aa18.62■□□□□ 0.57
NR1H3-227ENST00000498548 ALDH8A1Q9H2A2 487 aaPredicted RBP18.62■□□□□ 0.57
NR1H3-227ENST00000498548 BRPF3Q9ULD4 1205 aa18.62■□□□□ 0.57
NR1H3-227ENST00000498548 MRVI1Q9Y6F6 885 aa18.62■□□□□ 0.57
NR1H3-227ENST00000498548 SCN10AQ9Y5Y9 1956 aa18.61■□□□□ 0.57
NR1H3-227ENST00000498548 MMP3P08254 477 aa18.61■□□□□ 0.57
NR1H3-227ENST00000498548 CYP2C9P11712 490 aa18.61■□□□□ 0.57
NR1H3-227ENST00000498548 SMARCA1P28370 1054 aa18.61■□□□□ 0.57
NR1H3-227ENST00000498548 TSGA10IPQ3SY00 556 aa18.61■□□□□ 0.57
NR1H3-227ENST00000498548 USP17L6PQ6QN14 398 aa18.61■□□□□ 0.57
NR1H3-227ENST00000498548 C16orf59Q7L2K0 433 aa18.61■□□□□ 0.57
NR1H3-227ENST00000498548 DHX32Q7L7V1 743 aaKnown RBP18.61■□□□□ 0.57
NR1H3-227ENST00000498548 RNPC3Q96LT9 517 aaKnown RBP18.61■□□□□ 0.57
NR1H3-227ENST00000498548 FAM161BQ96MY7 647 aa18.61■□□□□ 0.57
NR1H3-227ENST00000498548 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.61■□□□□ 0.573e-7■■■□□ 18.1
NR1H3-227ENST00000498548 HIPK3Q9H422 1215 aa18.61■□□□□ 0.57
NR1H3-227ENST00000498548 SEC63Q9UGP8 760 aaKnown RBP18.61■□□□□ 0.57
NR1H3-227ENST00000498548 KPNA6O60684 536 aa18.6■□□□□ 0.57
NR1H3-227ENST00000498548 CCND2P30279 289 aa18.6■□□□□ 0.57
NR1H3-227ENST00000498548 PPIGQ13427 754 aaKnown RBP eCLIP18.6■□□□□ 0.576e-8■■□□□ 11.5
NR1H3-227ENST00000498548 GPR153Q6NV75 609 aa18.6■□□□□ 0.57
NR1H3-227ENST00000498548 SYNE3Q6ZMZ3 975 aa18.6■□□□□ 0.57
NR1H3-227ENST00000498548 TMTC3Q6ZXV5 915 aa18.6■□□□□ 0.57
NR1H3-227ENST00000498548 SGMS1Q86VZ5 419 aa18.6■□□□□ 0.57
NR1H3-227ENST00000498548 DHX37Q8IY37 1157 aaKnown RBP18.6■□□□□ 0.57
NR1H3-227ENST00000498548 TMEM199Q8N511 208 aa18.6■□□□□ 0.57
NR1H3-227ENST00000498548 RTEL1Q9NZ71 1219 aa18.6■□□□□ 0.57
NR1H3-227ENST00000498548 SP2Q02086 613 aa18.59■□□□□ 0.57
NR1H3-227ENST00000498548 TMEM240Q5SV17 173 aa18.59■□□□□ 0.57
NR1H3-227ENST00000498548 APOA5Q6Q788 366 aa18.59■□□□□ 0.57
NR1H3-227ENST00000498548 SMARCC2Q8TAQ2 1214 aa18.59■□□□□ 0.57
NR1H3-227ENST00000498548 SCLYQ96I15 445 aa18.59■□□□□ 0.57
NR1H3-227ENST00000498548 NOC4LQ9BVI4 516 aaKnown RBP18.59■□□□□ 0.57
NR1H3-227ENST00000498548 BCAS3Q9H6U6 928 aa18.59■□□□□ 0.57
NR1H3-227ENST00000498548 MTMR10Q9NXD2 777 aa18.59■□□□□ 0.57
NR1H3-227ENST00000498548 NAP1L2Q9ULW6 460 aaPredicted RBP18.59■□□□□ 0.57
NR1H3-227ENST00000498548 SNX14Q9Y5W7 946 aa18.59■□□□□ 0.57
NR1H3-227ENST00000498548 DOCK5Q9H7D0 1870 aa18.58■□□□□ 0.57
NR1H3-227ENST00000498548 MEIS2O14770 477 aa18.58■□□□□ 0.56
NR1H3-227ENST00000498548 CASTP20810 708 aaKnown RBP18.58■□□□□ 0.56
NR1H3-227ENST00000498548 MRPS9P82933 396 aaKnown RBP18.58■□□□□ 0.56
NR1H3-227ENST00000498548 KRT32Q14532 448 aa18.58■□□□□ 0.56
NR1H3-227ENST00000498548 ZNF365Q70YC5 407 aa18.58■□□□□ 0.56
NR1H3-227ENST00000498548 KAT2BQ92831 832 aa18.58■□□□□ 0.56
NR1H3-227ENST00000498548 CUL5Q93034 780 aa18.58■□□□□ 0.56
NR1H3-227ENST00000498548 SEZ6LQ9BYH1 1024 aa18.58■□□□□ 0.56
NR1H3-227ENST00000498548 WNT8AQ9H1J5 351 aa18.58■□□□□ 0.56
NR1H3-227ENST00000498548 KLF18A0A0U1RQI7 1052 aa18.57■□□□□ 0.56
NR1H3-227ENST00000498548 ZBTB43O43298 467 aa18.57■□□□□ 0.56
NR1H3-227ENST00000498548 GGPS1O95749 300 aa18.57■□□□□ 0.56
NR1H3-227ENST00000498548 HSPA4P34932 840 aa18.57■□□□□ 0.56
NR1H3-227ENST00000498548 LAMC2Q13753 1193 aa18.57■□□□□ 0.56
NR1H3-227ENST00000498548 UBE2SQ16763 222 aa18.57■□□□□ 0.56
NR1H3-227ENST00000498548 KCNB2Q92953 911 aa18.57■□□□□ 0.56
NR1H3-227ENST00000498548 JAKMIP1Q96N16 626 aaKnown RBP18.57■□□□□ 0.56
NR1H3-227ENST00000498548 ALG1Q9BT22 464 aa18.57■□□□□ 0.56
NR1H3-227ENST00000498548 IL23AQ9NPF7 189 aa18.57■□□□□ 0.56
NR1H3-227ENST00000498548 SCN5AQ14524 2016 aa18.57■□□□□ 0.56
NR1H3-227ENST00000498548 TRIP12Q14669 1992 aaPredicted RBP18.56■□□□□ 0.56
NR1H3-227ENST00000498548 RBAK-RBAKDNI3L0D1 243 aa18.56■□□□□ 0.56
NR1H3-227ENST00000498548 ZNF286BP0CG31 522 aa18.56■□□□□ 0.56
NR1H3-227ENST00000498548 APOBRQ0VD83 1088 aa18.56■□□□□ 0.56
NR1H3-227ENST00000498548 DGKDQ16760 1214 aa18.56■□□□□ 0.56
NR1H3-227ENST00000498548 RTN1Q16799 776 aa18.56■□□□□ 0.56
NR1H3-227ENST00000498548 HSDL1Q3SXM5 330 aa18.56■□□□□ 0.56
NR1H3-227ENST00000498548 CELF3Q5SZQ8 465 aaKnown RBP18.56■□□□□ 0.56
NR1H3-227ENST00000498548 MYSM1Q5VVJ2 828 aa18.56■□□□□ 0.56
NR1H3-227ENST00000498548 FAM109BQ6ICB4 259 aaPredicted RBP18.56■□□□□ 0.56
NR1H3-227ENST00000498548 NFRKBQ6P4R8 1299 aa18.56■□□□□ 0.56
NR1H3-227ENST00000498548 Q6ZUG5 572 aa18.56■□□□□ 0.56
NR1H3-227ENST00000498548 HEATR3Q7Z4Q2 680 aa18.56■□□□□ 0.56
NR1H3-227ENST00000498548 PSTPIP2Q9H939 334 aa18.56■□□□□ 0.56
NR1H3-227ENST00000498548 FRMPD4Q14CM0 1322 aa18.55■□□□□ 0.56
NR1H3-227ENST00000498548 CNTNAP5Q8WYK1 1306 aa18.55■□□□□ 0.56
NR1H3-227ENST00000498548 GOLGA8AA7E2F4 631 aa18.55■□□□□ 0.56
NR1H3-227ENST00000498548 GOLGA8BA8MQT2 603 aa18.55■□□□□ 0.56
NR1H3-227ENST00000498548 GRXCR1A8MXD5 290 aa18.55■□□□□ 0.56
NR1H3-227ENST00000498548 SUPT20HL2P0C7V6 817 aa18.55■□□□□ 0.56
NR1H3-227ENST00000498548 UBA1P22314 1058 aaKnown RBP18.55■□□□□ 0.56
NR1H3-227ENST00000498548 CDC27P30260 824 aa18.55■□□□□ 0.56
NR1H3-227ENST00000498548 PSEN2P49810 448 aa18.55■□□□□ 0.56
NR1H3-227ENST00000498548 SMAD3P84022 425 aaKnown RBP18.55■□□□□ 0.56
NR1H3-227ENST00000498548 FGD1P98174 961 aa18.55■□□□□ 0.56
NR1H3-227ENST00000498548 SEMA3FQ13275 785 aa18.55■□□□□ 0.56
NR1H3-227ENST00000498548 GDF6Q6KF10 455 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms