RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, human

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-242	ENST00000498280	EIF6	P56537	245 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-242	ENST00000498280	PPP2R5E	Q16537	467 aa		4.19	□□□□□ -1.74
RBM39-242	ENST00000498280	C9orf131	Q5VYM1	1079 aa		4.19	□□□□□ -1.74
RBM39-242	ENST00000498280	MCTP2	Q6DN12	878 aa		4.19	□□□□□ -1.74
RBM39-242	ENST00000498280	LIMS2	Q7Z4I7	341 aa		4.19	□□□□□ -1.74
RBM39-242	ENST00000498280	METTL16	Q86W50	562 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-242	ENST00000498280	ZNF747	Q9BV97	191 aa		4.19	□□□□□ -1.74
RBM39-242	ENST00000498280	KLC2	Q9H0B6	622 aa		4.19	□□□□□ -1.74
RBM39-242	ENST00000498280	BTG4	Q9NY30	223 aa		4.19	□□□□□ -1.74
RBM39-242	ENST00000498280	MARCH2	Q9P0N8	246 aa		4.19	□□□□□ -1.74
RBM39-242	ENST00000498280	AKT3	Q9Y243	479 aa		4.19	□□□□□ -1.74
RBM39-242	ENST00000498280	DDX3X	O00571	662 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	TBX1	O43435	398 aa		4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	PPM1B	O75688	479 aa		4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	FPR2	P25090	351 aa		4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	SCRN1	Q12765	414 aa		4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	CDSN	Q15517	529 aa		4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	PRR31	Q5SQ13	230 aa		4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	KIAA1211L	Q6NV74	962 aa		4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	CD300LD	Q6UXZ3	194 aa		4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	COPS5	Q92905	334 aa		4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	RNF34	Q969K3	372 aa		4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	RCC1L	Q96I51	464 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	SHD	Q96IW2	340 aa		4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	CRBN	Q96SW2	442 aa		4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	GBP3	Q9H0R5	595 aa		4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	PHAX	Q9H814	394 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	TMEFF2	Q9UIK5	374 aa	Predicted RBP	4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	FBXL7	Q9UJT9	491 aa		4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	SUGT1	Q9Y2Z0	365 aa		4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	CCDC9	Q9Y3X0	531 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-242	ENST00000498280	NPHS1	O60500	1241 aa		4.17	□□□□□ -1.74
RBM39-242	ENST00000498280	RECK	O95980	971 aa		4.17	□□□□□ -1.74
RBM39-242	ENST00000498280	THBD	P07204	575 aa		4.17	□□□□□ -1.74
RBM39-242	ENST00000498280	TGM1	P22735	817 aa		4.17	□□□□□ -1.74
RBM39-242	ENST00000498280	SELENOP	P49908	381 aa		4.17	□□□□□ -1.74
RBM39-242	ENST00000498280	ITGA1	P56199	1179 aa		4.17	□□□□□ -1.74
RBM39-242	ENST00000498280	CCDC103	Q8IW40	242 aa		4.17	□□□□□ -1.74
RBM39-242	ENST00000498280	TTLL6	Q8N841	843 aa		4.17	□□□□□ -1.74
RBM39-242	ENST00000498280	KY	Q8NBH2	561 aa		4.17	□□□□□ -1.74
RBM39-242	ENST00000498280	TXNDC5	Q8NBS9	432 aa	Known RBP	4.17	□□□□□ -1.74
RBM39-242	ENST00000498280	LCOR	Q96JN0	433 aa	Predicted RBP	4.17	□□□□□ -1.74
RBM39-242	ENST00000498280	METTL5	Q9NRN9	209 aa	Known RBP	4.17	□□□□□ -1.74
RBM39-242	ENST00000498280	WASF3	Q9UPY6	502 aa		4.17	□□□□□ -1.74
RBM39-242	ENST00000498280	EMC9	Q9Y3B6	208 aa		4.17	□□□□□ -1.74
RBM39-242	ENST00000498280	C22orf46	C9J442	243 aa		4.16	□□□□□ -1.74
RBM39-242	ENST00000498280	NASP	P49321	788 aa	Predicted RBP	4.16	□□□□□ -1.74
RBM39-242	ENST00000498280	GRB10	Q13322	594 aa		4.16	□□□□□ -1.74
RBM39-242	ENST00000498280	ADAM9	Q13443	819 aa		4.16	□□□□□ -1.74
RBM39-242	ENST00000498280	CR1L	Q2VPA4	569 aa		4.16	□□□□□ -1.74
RBM39-242	ENST00000498280	ETV3L	Q6ZN32	361 aa		4.16	□□□□□ -1.74
RBM39-242	ENST00000498280	ZC3H18	Q86VM9	953 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-242	ENST00000498280	NLRP10	Q86W26	655 aa		4.16	□□□□□ -1.74
RBM39-242	ENST00000498280	CIR1	Q86X95	450 aa	Predicted RBP	4.16	□□□□□ -1.74
RBM39-242	ENST00000498280	MIB1	Q86YT6	1006 aa		4.16	□□□□□ -1.74
RBM39-242	ENST00000498280	DCP2	Q8IU60	420 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-242	ENST00000498280	FRS2	Q8WU20	508 aa		4.16	□□□□□ -1.74
RBM39-242	ENST00000498280	PTPN18	Q99952	460 aa		4.16	□□□□□ -1.74
RBM39-242	ENST00000498280	SEMA4A	Q9H3S1	761 aa		4.16	□□□□□ -1.74
RBM39-242	ENST00000498280	DEF6	Q9H4E7	631 aa		4.16	□□□□□ -1.74
RBM39-242	ENST00000498280	TCAF1	Q9Y4C2	921 aa		4.16	□□□□□ -1.74
RBM39-242	ENST00000498280	C9orf118	A6NHY6	69 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	MUSK	O15146	869 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	B4GALT3	O60512	393 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	ICAM4	Q14773	271 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	SF1	Q15637	639 aa	Known RBP	4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	GTF2IRD2B	Q6EKJ0	949 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	VHLL	Q6RSH7	139 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	MILR1	Q7Z6M3	343 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	GTF2IRD2	Q86UP8	949 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	PALM2	Q8IXS6	379 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	ZNF654	Q8IZM8	581 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	C19orf47	Q8N9M1	422 aa	Known RBP	4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	NPLOC4	Q8TAT6	608 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	GPRASP2	Q96D09	838 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	MRGPRX3	Q96LB0	322 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	ZSWIM3	Q96MP5	696 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	MMP19	Q99542	508 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	PPP4R1L	Q9P1A2	415 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	HS3ST3A1	Q9Y663	406 aa		4.15	□□□□□ -1.75
RBM39-242	ENST00000498280	ANKRD34B	A5PLL1	514 aa		4.14	□□□□□ -1.75
RBM39-242	ENST00000498280	NPEPPSL1	A6NEC2	478 aa		4.14	□□□□□ -1.75
RBM39-242	ENST00000498280	AMH	P03971	560 aa		4.14	□□□□□ -1.75
RBM39-242	ENST00000498280	CASP7	P55210	303 aa		4.14	□□□□□ -1.75
RBM39-242	ENST00000498280	KLF10	Q13118	480 aa		4.14	□□□□□ -1.75
RBM39-242	ENST00000498280	PRSS53	Q2L4Q9	553 aa		4.14	□□□□□ -1.75
RBM39-242	ENST00000498280	ZNF585A	Q6P3V2	769 aa		4.14	□□□□□ -1.75
RBM39-242	ENST00000498280	BVES	Q8NE79	360 aa		4.14	□□□□□ -1.75
RBM39-242	ENST00000498280	RASGRP4	Q8TDF6	673 aa		4.14	□□□□□ -1.75
RBM39-242	ENST00000498280	BTN2A2	Q8WVV5	523 aa		4.14	□□□□□ -1.75
RBM39-242	ENST00000498280	MBD6	Q96DN6	1003 aa		4.14	□□□□□ -1.75
RBM39-242	ENST00000498280	AP5M1	Q9H0R1	490 aa		4.14	□□□□□ -1.75
RBM39-242	ENST00000498280	CD248	Q9HCU0	757 aa		4.14	□□□□□ -1.75
RBM39-242	ENST00000498280	RBPJL	Q9UBG7	517 aa		4.14	□□□□□ -1.75
RBM39-242	ENST00000498280	SLC12A7	Q9Y666	1083 aa		4.14	□□□□□ -1.75
RBM39-242	ENST00000498280	TRBV23OR9-2	A0A075B6M9	112 aa		4.13	□□□□□ -1.75
RBM39-242	ENST00000498280	LCP1	P13796	627 aa		4.13	□□□□□ -1.75
RBM39-242	ENST00000498280	BCL6	P41182	706 aa		4.13	□□□□□ -1.75
RBM39-242	ENST00000498280	MLLT6	P55198	1093 aa	Predicted RBP	4.13	□□□□□ -1.75

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