RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 LRRC37A2A6NM11 1700 aa18.28■□□□□ 0.52
SSBP1-214ENST00000498107 NKRFO15226 690 aaKnown RBP eCLIP18.27■□□□□ 0.52
SSBP1-214ENST00000498107 DUSP11O75319 330 aaKnown RBP18.27■□□□□ 0.52
SSBP1-214ENST00000498107 NLRX1Q86UT6 975 aa18.27■□□□□ 0.52
SSBP1-214ENST00000498107 HSCBQ8IWL3 235 aa18.27■□□□□ 0.52
SSBP1-214ENST00000498107 ANKLE1Q8NAG6 615 aa18.27■□□□□ 0.52
SSBP1-214ENST00000498107 ARRDC4Q8NCT1 418 aa18.27■□□□□ 0.52
SSBP1-214ENST00000498107 WDR11Q9BZH6 1224 aa18.27■□□□□ 0.52
SSBP1-214ENST00000498107 OGDHLQ9ULD0 1010 aa18.27■□□□□ 0.52
SSBP1-214ENST00000498107 Q9Y3F1 56 aa18.27■□□□□ 0.52
SSBP1-214ENST00000498107 KIAA1217Q5T5P2 1943 aa18.26■□□□□ 0.51
SSBP1-214ENST00000498107 K7ELQ4 463 aaPredicted RBP18.26■□□□□ 0.51
SSBP1-214ENST00000498107 TGFB3P10600 412 aa18.26■□□□□ 0.51
SSBP1-214ENST00000498107 SREBF1P36956 1147 aa18.26■□□□□ 0.51
SSBP1-214ENST00000498107 ADCYAP1R1P41586 468 aa18.26■□□□□ 0.51
SSBP1-214ENST00000498107 SAFBQ15424 915 aaKnown RBP eCLIP18.26■□□□□ 0.51
SSBP1-214ENST00000498107 DUSP28Q4G0W2 176 aa18.26■□□□□ 0.51
SSBP1-214ENST00000498107 LHX8Q68G74 356 aa18.26■□□□□ 0.51
SSBP1-214ENST00000498107 SEPT14Q6ZU15 432 aa18.26■□□□□ 0.51
SSBP1-214ENST00000498107 IL31RAQ8NI17 732 aa18.26■□□□□ 0.51
SSBP1-214ENST00000498107 C8orf76Q96K31 380 aa18.26■□□□□ 0.51
SSBP1-214ENST00000498107 XPNPEP3Q9NQH7 507 aa18.26■□□□□ 0.51
SSBP1-214ENST00000498107 TMEM260Q9NX78 707 aa18.26■□□□□ 0.51
SSBP1-214ENST00000498107 KCNJ14Q9UNX9 436 aa18.26■□□□□ 0.51
SSBP1-214ENST00000498107 SMC3Q9UQE7 1217 aa18.26■□□□□ 0.51
SSBP1-214ENST00000498107 DDX49Q9Y6V7 483 aaKnown RBP18.26■□□□□ 0.51
SSBP1-214ENST00000498107 KRT2P35908 639 aa18.25■□□□□ 0.51
SSBP1-214ENST00000498107 SOX10P56693 466 aa18.25■□□□□ 0.51
SSBP1-214ENST00000498107 CUL4AQ13619 759 aa18.25■□□□□ 0.51
SSBP1-214ENST00000498107 KRT25Q7Z3Z0 450 aa18.25■□□□□ 0.51
SSBP1-214ENST00000498107 SHISA4Q96DD7 197 aa18.25■□□□□ 0.51
SSBP1-214ENST00000498107 CDHR1Q96JP9 859 aa18.25■□□□□ 0.51
SSBP1-214ENST00000498107 AP5M1Q9H0R1 490 aa18.25■□□□□ 0.51
SSBP1-214ENST00000498107 PDGFCQ9NRA1 345 aa18.25■□□□□ 0.51
SSBP1-214ENST00000498107 MRVI1Q9Y6F6 885 aa18.25■□□□□ 0.51
SSBP1-214ENST00000498107 CCDC194A0A1B0GVG4 234 aa18.24■□□□□ 0.51
SSBP1-214ENST00000498107 POTEFA5A3E0 1075 aa18.24■□□□□ 0.51
SSBP1-214ENST00000498107 MAFGO15525 162 aa18.24■□□□□ 0.51
SSBP1-214ENST00000498107 MMP1P03956 469 aa18.24■□□□□ 0.51
SSBP1-214ENST00000498107 TXNP10599 105 aaKnown RBP18.24■□□□□ 0.51
SSBP1-214ENST00000498107 SMPD1P17405 629 aa18.24■□□□□ 0.51
SSBP1-214ENST00000498107 ZNF76P36508 570 aa18.24■□□□□ 0.51
SSBP1-214ENST00000498107 MRPS9P82933 396 aaKnown RBP18.24■□□□□ 0.51
SSBP1-214ENST00000498107 ARHGAP4P98171 946 aa18.24■□□□□ 0.51
SSBP1-214ENST00000498107 KRT40Q6A162 431 aa18.24■□□□□ 0.51
SSBP1-214ENST00000498107 RNF180Q86T96 592 aa18.24■□□□□ 0.51
SSBP1-214ENST00000498107 GPRASP2Q96D09 838 aa18.24■□□□□ 0.51
SSBP1-214ENST00000498107 INTS4Q96HW7 963 aaKnown RBP18.24■□□□□ 0.51
SSBP1-214ENST00000498107 INPP4AQ96PE3 977 aaPredicted RBP18.24■□□□□ 0.51
SSBP1-214ENST00000498107 CENPFP49454 3210 aa18.24■□□□□ 0.51
SSBP1-214ENST00000498107 FIBPO43427 364 aa18.23■□□□□ 0.51
SSBP1-214ENST00000498107 DTNBO60941 627 aa18.23■□□□□ 0.51
SSBP1-214ENST00000498107 CYP3A4P08684 503 aa18.23■□□□□ 0.51
SSBP1-214ENST00000498107 ICAM3P32942 547 aa18.23■□□□□ 0.51
SSBP1-214ENST00000498107 NONOQ15233 471 aaKnown RBP eCLIP18.23■□□□□ 0.51
SSBP1-214ENST00000498107 NPY5RQ15761 445 aa18.23■□□□□ 0.51
SSBP1-214ENST00000498107 BRDTQ58F21 947 aaPredicted RBP18.23■□□□□ 0.51
SSBP1-214ENST00000498107 ANO1Q5XXA6 986 aa18.23■□□□□ 0.51
SSBP1-214ENST00000498107 TLK2Q86UE8 772 aa18.23■□□□□ 0.51
SSBP1-214ENST00000498107 RASGRP4Q8TDF6 673 aa18.23■□□□□ 0.51
SSBP1-214ENST00000498107 PGBD1Q96JS3 809 aa18.23■□□□□ 0.51
SSBP1-214ENST00000498107 GNEQ9Y223 722 aaKnown RBP18.23■□□□□ 0.51
SSBP1-214ENST00000498107 FRMPD3Q5JV73 1810 aa18.23■□□□□ 0.51
SSBP1-214ENST00000498107 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.22■□□□□ 0.51
SSBP1-214ENST00000498107 M0R2N6 131 aa18.22■□□□□ 0.51
SSBP1-214ENST00000498107 EN2P19622 333 aaPredicted RBP18.22■□□□□ 0.51
SSBP1-214ENST00000498107 GJB2P29033 226 aa18.22■□□□□ 0.51
SSBP1-214ENST00000498107 USP11P51784 963 aa18.22■□□□□ 0.51
SSBP1-214ENST00000498107 GJA9P57773 515 aa18.22■□□□□ 0.51
SSBP1-214ENST00000498107 CEP55Q53EZ4 464 aa18.22■□□□□ 0.51
SSBP1-214ENST00000498107 CCDC62Q6P9F0 684 aa18.22■□□□□ 0.51
SSBP1-214ENST00000498107 FBXO18Q8NFZ0 1043 aa18.22■□□□□ 0.51
SSBP1-214ENST00000498107 MXRA8Q9BRK3 442 aa18.22■□□□□ 0.51
SSBP1-214ENST00000498107 UPF3AQ9H1J1 476 aaKnown RBP18.22■□□□□ 0.51
SSBP1-214ENST00000498107 GJB4Q9NTQ9 266 aa18.22■□□□□ 0.51
SSBP1-214ENST00000498107 RTEL1Q9NZ71 1219 aa18.22■□□□□ 0.51
SSBP1-214ENST00000498107 DDX41Q9UJV9 622 aaKnown RBP18.22■□□□□ 0.51
SSBP1-214ENST00000498107 UBIAD1Q9Y5Z9 338 aa18.22■□□□□ 0.51
SSBP1-214ENST00000498107 SYNRGQ9UMZ2 1314 aa18.22■□□□□ 0.51
SSBP1-214ENST00000498107 SPATA31C2B4DYI2 1134 aa18.21■□□□□ 0.51
SSBP1-214ENST00000498107 KBTBD13C9JR72 458 aa18.21■□□□□ 0.51
SSBP1-214ENST00000498107 DNM1LO00429 736 aa18.21■□□□□ 0.51
SSBP1-214ENST00000498107 DYNC1LI2O43237 492 aaPredicted RBP18.21■□□□□ 0.51
SSBP1-214ENST00000498107 ZEB2O60315 1214 aa18.21■□□□□ 0.51
SSBP1-214ENST00000498107 RGS20O76081 388 aa18.21■□□□□ 0.51
SSBP1-214ENST00000498107 GH1P01241 217 aa18.21■□□□□ 0.51
SSBP1-214ENST00000498107 C6orf222P0C671 652 aaPredicted RBP18.21■□□□□ 0.51
SSBP1-214ENST00000498107 FOSBP53539 338 aa18.21■□□□□ 0.51
SSBP1-214ENST00000498107 NKX3-2P78367 333 aa18.21■□□□□ 0.51
SSBP1-214ENST00000498107 NEDD9Q14511 834 aa18.21■□□□□ 0.51
SSBP1-214ENST00000498107 NIPA1Q7RTP0 329 aa18.21■□□□□ 0.51
SSBP1-214ENST00000498107 DIS3L2Q8IYB7 885 aaKnown RBP18.21■□□□□ 0.51
SSBP1-214ENST00000498107 PCSK9Q8NBP7 692 aaKnown RBP18.21■□□□□ 0.51
SSBP1-214ENST00000498107 GIMAP8Q8ND71 665 aaPredicted RBP18.21■□□□□ 0.51
SSBP1-214ENST00000498107 CRYGNQ8WXF5 182 aa18.21■□□□□ 0.51
SSBP1-214ENST00000498107 JADE2Q9NQC1 790 aa18.21■□□□□ 0.51
SSBP1-214ENST00000498107 MYH7BA7E2Y1 1941 aa18.2■□□□□ 0.5
SSBP1-214ENST00000498107 ADCY6O43306 1168 aa18.2■□□□□ 0.5
SSBP1-214ENST00000498107 ADAMTS4O75173 837 aa18.2■□□□□ 0.5
SSBP1-214ENST00000498107 FARP2O94887 1054 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms