RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.9□□□□□ -1.3
CACNA1C-229ENST00000496818 HSP90AB4PQ58FF6 505 aa6.9□□□□□ -1.3
CACNA1C-229ENST00000496818 OLFML2BQ68BL8 750 aa6.9□□□□□ -1.3
CACNA1C-229ENST00000496818 FAM109BQ6ICB4 259 aaPredicted RBP6.9□□□□□ -1.3
CACNA1C-229ENST00000496818 ALKBH2Q6NS38 261 aa6.9□□□□□ -1.3
CACNA1C-229ENST00000496818 TMEM179Q6ZVK1 233 aa6.9□□□□□ -1.3
CACNA1C-229ENST00000496818 AACSQ86V21 672 aa6.9□□□□□ -1.3
CACNA1C-229ENST00000496818 CRIPAKQ8N1N5 446 aa6.9□□□□□ -1.3
CACNA1C-229ENST00000496818 SHCBP1Q8NEM2 672 aa6.9□□□□□ -1.3
CACNA1C-229ENST00000496818 GPR152Q8TDT2 470 aa6.9□□□□□ -1.3
CACNA1C-229ENST00000496818 SSH3Q8TE77 659 aa6.9□□□□□ -1.3
CACNA1C-229ENST00000496818 EDEM1Q92611 657 aa6.9□□□□□ -1.3
CACNA1C-229ENST00000496818 MCM9Q9NXL9 1143 aa6.9□□□□□ -1.3
CACNA1C-229ENST00000496818 TLR7Q9NYK1 1049 aaKnown RBP6.9□□□□□ -1.3
CACNA1C-229ENST00000496818 SWAP70Q9UH65 585 aa6.9□□□□□ -1.3
CACNA1C-229ENST00000496818 POLIQ9UNA4 740 aa6.9□□□□□ -1.3
CACNA1C-229ENST00000496818 AK9Q5TCS8 1911 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 A0A1W2PNR3 127 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 SEPT4O43236 478 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 NDUFB5O43674 189 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 STRNO43815 780 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 BCAR3O75815 825 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 MICAL2O94851 1124 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 SHMT1P34896 483 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 COPB2P35606 906 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 DEKP35659 375 aaKnown RBP6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 ATP8B2P98198 1209 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 ICA1Q05084 483 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 PLS1Q14651 629 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 LAPTM4AQ15012 233 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 WDR44Q5JSH3 913 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 RIPOR1Q6ZS17 1223 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 NCAPG2Q86XI2 1143 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 ACER1Q8TDN7 264 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 FAM161BQ96MY7 647 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 IPO9Q96P70 1041 aaKnown RBP6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 CRBNQ96SW2 442 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 SPATC1LQ9H0A9 340 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 CCDC8Q9H0W5 538 aaPredicted RBP6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 MROH8Q9H579 483 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 HOXC10Q9NYD6 342 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 FLRT1Q9NZU1 646 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 BTBD7Q9P203 1132 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 ROBO3Q96MS0 1386 aa6.89□□□□□ -1.31
CACNA1C-229ENST00000496818 SIPA1L1O43166 1804 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 ATAD5Q96QE3 1844 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 ZNF236Q9UL36 1845 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 WDR46O15213 610 aaKnown RBP6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 FLOT1O75955 427 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 RARBP10826 455 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 FCER1AP12319 257 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 ERCC3P19447 782 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 IDH3AP50213 366 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 COG2Q14746 738 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 SEPT2Q15019 361 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 TRIM60Q495X7 471 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 GJC2Q5T442 439 aaPredicted RBP6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 SLC9C2Q5TAH2 1124 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 TMC7Q7Z402 723 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 ABRAQ8N0Z2 381 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 CLASRPQ8N2M8 674 aaKnown RBP6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 NPLOC4Q8TAT6 608 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 EAF2Q96CJ1 260 aaPredicted RBP6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 GUCD1Q96NT3 240 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 DNAJC2Q99543 621 aaKnown RBP6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 RIOK1Q9BRS2 568 aaKnown RBP6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 MOV10L1Q9BXT6 1211 aaKnown RBP6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 GMPR2Q9P2T1 348 aaKnown RBP6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 NRBP1Q9UHY1 535 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 TNNQ9UQP3 1299 aa6.88□□□□□ -1.31
CACNA1C-229ENST00000496818 TMEM265A0A087WTH1 108 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 A6NHS1 94 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 TGFBR3LH3BV60 316 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 OPLAHO14841 1288 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 HMMRO75330 724 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 SLC25A27O95847 323 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 F11P03951 625 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 IFIT2P09913 472 aaKnown RBP6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 AKR1A1P14550 325 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 FOSL2P15408 326 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 PDE6AP16499 860 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 PLCD1P51178 756 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 SMAD3P84022 425 aaKnown RBP6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 PTSQ03393 145 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 GABPAQ06546 454 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 KCTD2Q14681 263 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 SNX17Q15036 470 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 C8orf34Q49A92 452 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 FAM47AQ5JRC9 791 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 ANO1Q5XXA6 986 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 CEP85Q6P2H3 762 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 CENPQQ7L2Z9 268 aaPredicted RBP6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 RNF180Q86T96 592 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 RGL4Q8IZJ4 473 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 CMTR1Q8N1G2 835 aaKnown RBP6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 PGBD3Q8N328 593 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 MAFAQ8NHW3 353 aaPredicted RBP6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 SDR42E1Q8WUS8 393 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 MAML3Q96JK9 1138 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 RNPC3Q96LT9 517 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms