RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 HOMER2Q9NSB8 354 aa15.27■□□□□ 0.04
PHGDH-207ENST00000496756 CLIP2Q9UDT6 1046 aa15.27■□□□□ 0.04
PHGDH-207ENST00000496756 KLF18A0A0U1RQI7 1052 aa15.26■□□□□ 0.03
PHGDH-207ENST00000496756 MINDY4BA8MYZ0 360 aa15.26■□□□□ 0.03
PHGDH-207ENST00000496756 B4E1Z4 1266 aa15.26■□□□□ 0.03
PHGDH-207ENST00000496756 KIF28PB7ZC32 967 aa15.26■□□□□ 0.03
PHGDH-207ENST00000496756 SYT1P21579 422 aa15.26■□□□□ 0.03
PHGDH-207ENST00000496756 ANTXR2P58335 489 aa15.26■□□□□ 0.03
PHGDH-207ENST00000496756 APOBRQ0VD83 1088 aa15.26■□□□□ 0.03
PHGDH-207ENST00000496756 IQCA1Q86XH1 822 aa15.26■□□□□ 0.03
PHGDH-207ENST00000496756 NECAB1Q8N987 351 aa15.26■□□□□ 0.03
PHGDH-207ENST00000496756 SMARCC2Q8TAQ2 1214 aa15.26■□□□□ 0.03
PHGDH-207ENST00000496756 PHOSPHO2Q8TCD6 241 aa15.26■□□□□ 0.03
PHGDH-207ENST00000496756 SCLYQ96I15 445 aa15.26■□□□□ 0.03
PHGDH-207ENST00000496756 LARP6Q9BRS8 491 aaKnown RBP15.26■□□□□ 0.03
PHGDH-207ENST00000496756 UBAC1Q9BSL1 405 aa15.26■□□□□ 0.03
PHGDH-207ENST00000496756 TOMM22Q9NS69 142 aa15.26■□□□□ 0.03
PHGDH-207ENST00000496756 LAMA4Q16363 1823 aa15.26■□□□□ 0.03
PHGDH-207ENST00000496756 MUC6Q6W4X9 2439 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 NEDD4P46934 1319 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 CCDC196A0A1B0GTZ2 297 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 CCDC69A6NI79 296 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 GOLGA8BA8MQT2 603 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 RFXAPO00287 272 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 CPLX1O14810 134 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 IFIT3O14879 490 aaKnown RBP15.25■□□□□ 0.03
PHGDH-207ENST00000496756 KDM4AO75164 1064 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 SMPD1P17405 629 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 RFC2P35250 354 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 PSMC6P62333 389 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 CTDSPL2Q05D32 466 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 SCRN1Q12765 414 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 STK3Q13188 491 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 TTLL4Q14679 1199 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 NFXL1Q6ZNB6 911 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 MKL1Q969V6 931 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 VWCEQ96DN2 955 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 LRRC2Q9BYS8 371 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 A1CFQ9NQ94 594 aaKnown RBP15.25■□□□□ 0.03
PHGDH-207ENST00000496756 LRRC37A2A6NM11 1700 aa15.25■□□□□ 0.03
PHGDH-207ENST00000496756 MYH4Q9Y623 1939 aa15.24■□□□□ 0.03
PHGDH-207ENST00000496756 ST3GAL1Q11201 340 aa15.24■□□□□ 0.03
PHGDH-207ENST00000496756 WTAPQ15007 396 aa15.24■□□□□ 0.03
PHGDH-207ENST00000496756 TKFCQ3LXA3 575 aa15.24■□□□□ 0.03
PHGDH-207ENST00000496756 GMCL1P1Q8NEA9 526 aa15.24■□□□□ 0.03
PHGDH-207ENST00000496756 IGDCC4Q8TDY8 1250 aa15.24■□□□□ 0.03
PHGDH-207ENST00000496756 ARNTL2Q8WYA1 636 aa15.24■□□□□ 0.03
PHGDH-207ENST00000496756 CERS4Q9HA82 394 aa15.24■□□□□ 0.03
PHGDH-207ENST00000496756 POLR3EQ9NVU0 708 aa15.24■□□□□ 0.03
PHGDH-207ENST00000496756 ZSWIM5Q9P217 1185 aa15.24■□□□□ 0.03
PHGDH-207ENST00000496756 NAP1L2Q9ULW6 460 aaPredicted RBP15.24■□□□□ 0.03
PHGDH-207ENST00000496756 ZDHHC9Q9Y397 364 aa15.24■□□□□ 0.03
PHGDH-207ENST00000496756 SLC12A7Q9Y666 1083 aa15.24■□□□□ 0.03
PHGDH-207ENST00000496756 NID2Q14112 1375 aa15.24■□□□□ 0.03
PHGDH-207ENST00000496756 TNKSO95271 1327 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 IGKV6D-41A0A0C4DH26 115 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 SOWAHBA6NEL2 793 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 ZBTB43O43298 467 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 TTLL1O95922 423 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 F13A1P00488 732 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 CALM1P0DP23 149 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 CALM2P0DP24 149 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 CALM3P0DP25 149 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 BMP3P12645 472 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 METAP2P50579 478 aaKnown RBP eCLIP15.23■□□□□ 0.031e-10■■■□□ 15.8
PHGDH-207ENST00000496756 STAT2P52630 851 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 TAP1Q03518 808 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 CYB5R4Q7L1T6 521 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 DEFB128Q7Z7B8 93 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 ZNF444Q8N0Y2 327 aaPredicted RBP15.23■□□□□ 0.03
PHGDH-207ENST00000496756 CHURC1Q8WUH1 139 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 VTA1Q9NP79 307 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 RNF146Q9NTX7 359 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 MTMR4Q9NYA4 1195 aa15.23■□□□□ 0.03
PHGDH-207ENST00000496756 PTPDC1A2A3K4 754 aa15.22■□□□□ 0.03
PHGDH-207ENST00000496756 EPOPA6NHQ4 379 aa15.22■□□□□ 0.03
PHGDH-207ENST00000496756 PI4K2BG5E9Z4 385 aa15.22■□□□□ 0.03
PHGDH-207ENST00000496756 PITPNM1O00562 1244 aa15.22■□□□□ 0.03
PHGDH-207ENST00000496756 CYP2C9P11712 490 aa15.22■□□□□ 0.03
PHGDH-207ENST00000496756 RRP12Q5JTH9 1297 aaKnown RBP15.22■□□□□ 0.03
PHGDH-207ENST00000496756 KRT40Q6A162 431 aa15.22■□□□□ 0.03
PHGDH-207ENST00000496756 TAPT1Q6NXT6 567 aa15.22■□□□□ 0.03
PHGDH-207ENST00000496756 APOA5Q6Q788 366 aa15.22■□□□□ 0.03
PHGDH-207ENST00000496756 CHST3Q7LGC8 479 aa15.22■□□□□ 0.03
PHGDH-207ENST00000496756 FAM160B2Q86V87 743 aa15.22■□□□□ 0.03
PHGDH-207ENST00000496756 HERC6Q8IVU3 1022 aa15.22■□□□□ 0.03
PHGDH-207ENST00000496756 NSUN7Q8NE18 718 aaKnown RBP15.22■□□□□ 0.03
PHGDH-207ENST00000496756 CEP95Q96GE4 821 aa15.22■□□□□ 0.03
PHGDH-207ENST00000496756 ZSCAN16Q9H4T2 348 aaPredicted RBP15.22■□□□□ 0.03
PHGDH-207ENST00000496756 LY9Q9HBG7 655 aa15.22■□□□□ 0.03
PHGDH-207ENST00000496756 C11orf16Q9NQ32 467 aa15.22■□□□□ 0.03
PHGDH-207ENST00000496756 TRMT13Q9NUP7 481 aaKnown RBP15.22■□□□□ 0.03
PHGDH-207ENST00000496756 LMCD1Q9NZU5 365 aa15.22■□□□□ 0.03
PHGDH-207ENST00000496756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.22■□□□□ 0.03
PHGDH-207ENST00000496756 TMEM232C9JQI7 657 aa15.21■□□□□ 0.03
PHGDH-207ENST00000496756 H3BQV1 296 aa15.21■□□□□ 0.03
PHGDH-207ENST00000496756 NCLP19338 710 aaKnown RBP15.21■□□□□ 0.03
PHGDH-207ENST00000496756 CPT1AP50416 773 aa15.21■□□□□ 0.03
PHGDH-207ENST00000496756 PKP1Q13835 747 aa15.21■□□□□ 0.03
PHGDH-207ENST00000496756 COL9A3Q14050 684 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms