RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 FBXO16Q8IX29 292 aaPredicted RBP20.9■□□□□ 0.94
TSSC4-210ENST00000496468 KIAA1217Q5T5P2 1943 aa20.89■□□□□ 0.93
TSSC4-210ENST00000496468 MYH15Q9Y2K3 1946 aa20.89■□□□□ 0.93
TSSC4-210ENST00000496468 STAM2O75886 525 aa20.89■□□□□ 0.93
TSSC4-210ENST00000496468 IGHA2P01877 340 aa20.89■□□□□ 0.93
TSSC4-210ENST00000496468 PKP1Q13835 747 aa20.89■□□□□ 0.93
TSSC4-210ENST00000496468 SLC9C1Q4G0N8 1177 aa20.89■□□□□ 0.93
TSSC4-210ENST00000496468 BRAPQ7Z569 592 aa20.89■□□□□ 0.93
TSSC4-210ENST00000496468 CRYGNQ8WXF5 182 aa20.89■□□□□ 0.93
TSSC4-210ENST00000496468 VTA1Q9NP79 307 aa20.89■□□□□ 0.93
TSSC4-210ENST00000496468 ZHX1Q9UKY1 873 aaPredicted RBP20.89■□□□□ 0.93
TSSC4-210ENST00000496468 NOL7Q9UMY1 257 aaKnown RBP20.89■□□□□ 0.93
TSSC4-210ENST00000496468 SNAI1O95863 264 aaPredicted RBP20.88■□□□□ 0.93
TSSC4-210ENST00000496468 INHAP05111 366 aa20.88■□□□□ 0.93
TSSC4-210ENST00000496468 CYP3A4P08684 503 aa20.88■□□□□ 0.93
TSSC4-210ENST00000496468 ZSCAN22P10073 491 aaPredicted RBP20.88■□□□□ 0.93
TSSC4-210ENST00000496468 PRKAR2AP13861 404 aaKnown RBP20.88■□□□□ 0.93
TSSC4-210ENST00000496468 ZNF76P36508 570 aa20.88■□□□□ 0.93
TSSC4-210ENST00000496468 MRPS9P82933 396 aaKnown RBP20.88■□□□□ 0.93
TSSC4-210ENST00000496468 RESTQ13127 1097 aa20.88■□□□□ 0.93
TSSC4-210ENST00000496468 LETM2Q2VYF4 491 aa20.88■□□□□ 0.93
TSSC4-210ENST00000496468 EEPD1Q7L9B9 569 aa20.88■□□□□ 0.93
TSSC4-210ENST00000496468 VSIG10LQ86VR7 867 aa20.88■□□□□ 0.93
TSSC4-210ENST00000496468 ABHD16BQ9H3Z7 469 aa20.88■□□□□ 0.93
TSSC4-210ENST00000496468 NRBP1Q9UHY1 535 aa20.88■□□□□ 0.93
TSSC4-210ENST00000496468 EIF3JO75822 258 aaKnown RBP20.87■□□□□ 0.93
TSSC4-210ENST00000496468 USP11P51784 963 aa20.87■□□□□ 0.93
TSSC4-210ENST00000496468 TRIM32Q13049 653 aa20.87■□□□□ 0.93
TSSC4-210ENST00000496468 GNPTABQ3T906 1256 aa20.87■□□□□ 0.93
TSSC4-210ENST00000496468 FOXD4L5Q5VV16 416 aaPredicted RBP20.87■□□□□ 0.93
TSSC4-210ENST00000496468 SH3TC2Q8TF17 1288 aa20.87■□□□□ 0.93
TSSC4-210ENST00000496468 FOXD4L4Q8WXT5 416 aaPredicted RBP20.87■□□□□ 0.93
TSSC4-210ENST00000496468 NAP1L4Q99733 375 aaKnown RBP20.87■□□□□ 0.93
TSSC4-210ENST00000496468 CYBAP13498 195 aa20.86■□□□□ 0.93
TSSC4-210ENST00000496468 DDIT3P35638 169 aa20.86■□□□□ 0.93
TSSC4-210ENST00000496468 TRAPPC10P48553 1259 aa20.86■□□□□ 0.93
TSSC4-210ENST00000496468 SETQ01105 290 aaPredicted RBP20.86■□□□□ 0.93
TSSC4-210ENST00000496468 ACVR2BQ13705 512 aa20.86■□□□□ 0.93
TSSC4-210ENST00000496468 CEP55Q53EZ4 464 aa20.86■□□□□ 0.93
TSSC4-210ENST00000496468 NLRX1Q86UT6 975 aa20.86■□□□□ 0.93
TSSC4-210ENST00000496468 ZFP91Q96JP5 570 aaPredicted RBP20.86■□□□□ 0.93
TSSC4-210ENST00000496468 INPP4AQ96PE3 977 aaPredicted RBP20.86■□□□□ 0.93
TSSC4-210ENST00000496468 KATNBL1Q9H079 304 aa20.86■□□□□ 0.93
TSSC4-210ENST00000496468 ZSCAN16Q9H4T2 348 aaPredicted RBP20.86■□□□□ 0.93
TSSC4-210ENST00000496468 RTEL1Q9NZ71 1219 aa20.86■□□□□ 0.93
TSSC4-210ENST00000496468 CCNT1O60563 726 aaKnown RBP20.85■□□□□ 0.93
TSSC4-210ENST00000496468 TDP2O95551 362 aa20.85■□□□□ 0.93
TSSC4-210ENST00000496468 BRD1O95696 1058 aa20.85■□□□□ 0.93
TSSC4-210ENST00000496468 F13A1P00488 732 aa20.85■□□□□ 0.93
TSSC4-210ENST00000496468 GCFC2P16383 781 aaKnown RBP20.85■□□□□ 0.93
TSSC4-210ENST00000496468 CIITAP33076 1130 aa20.85■□□□□ 0.93
TSSC4-210ENST00000496468 CACNB2Q08289 660 aaPredicted RBP20.85■□□□□ 0.93
TSSC4-210ENST00000496468 MTMR1Q13613 665 aa20.85■□□□□ 0.93
TSSC4-210ENST00000496468 MOXD1Q6UVY6 613 aa20.85■□□□□ 0.93
TSSC4-210ENST00000496468 SEPT14Q6ZU15 432 aa20.85■□□□□ 0.93
TSSC4-210ENST00000496468 GPRASP2Q96D09 838 aa20.85■□□□□ 0.93
TSSC4-210ENST00000496468 MXRA8Q9BRK3 442 aa20.85■□□□□ 0.93
TSSC4-210ENST00000496468 UBIAD1Q9Y5Z9 338 aa20.85■□□□□ 0.93
TSSC4-210ENST00000496468 FAM86B1E9PN63 330 aa20.84■□□□□ 0.93
TSSC4-210ENST00000496468 FIBPO43427 364 aa20.84■□□□□ 0.93
TSSC4-210ENST00000496468 FAM86B2P0C5J1 330 aa20.84■□□□□ 0.93
TSSC4-210ENST00000496468 ZNF865P0CJ78 1059 aaPredicted RBP20.84■□□□□ 0.93
TSSC4-210ENST00000496468 ITGB5P18084 799 aa20.84■□□□□ 0.93
TSSC4-210ENST00000496468 ATP2B1P20020 1258 aa20.84■□□□□ 0.93
TSSC4-210ENST00000496468 NUCB2P80303 420 aa20.84■□□□□ 0.93
TSSC4-210ENST00000496468 RILPL1Q5EBL4 403 aa20.84■□□□□ 0.93
TSSC4-210ENST00000496468 TTC38Q5R3I4 469 aa20.84■□□□□ 0.93
TSSC4-210ENST00000496468 MAP3K21Q5TCX8 1036 aa20.84■□□□□ 0.93
TSSC4-210ENST00000496468 MYSM1Q5VVJ2 828 aa20.84■□□□□ 0.93
TSSC4-210ENST00000496468 NIPA1Q7RTP0 329 aa20.84■□□□□ 0.93
TSSC4-210ENST00000496468 SCFD2Q8WU76 684 aa20.84■□□□□ 0.93
TSSC4-210ENST00000496468 CDHR1Q96JP9 859 aa20.84■□□□□ 0.93
TSSC4-210ENST00000496468 JADE2Q9NQC1 790 aa20.84■□□□□ 0.93
TSSC4-210ENST00000496468 DDX25Q9UHL0 483 aaKnown RBP20.84■□□□□ 0.93
TSSC4-210ENST00000496468 CIZ1Q9ULV3 898 aaPredicted RBP20.84■□□□□ 0.93
TSSC4-210ENST00000496468 MRVI1Q9Y6F6 885 aa20.84■□□□□ 0.93
TSSC4-210ENST00000496468 RGS20O76081 388 aa20.83■□□□□ 0.93
TSSC4-210ENST00000496468 PRR16Q569H4 304 aa20.83■□□□□ 0.93
TSSC4-210ENST00000496468 PRAMEF19Q5SWL8 479 aa20.83■□□□□ 0.93
TSSC4-210ENST00000496468 PPP4R3AQ6IN85 833 aa20.83■□□□□ 0.93
TSSC4-210ENST00000496468 PLA2G4DQ86XP0 818 aa20.83■□□□□ 0.93
TSSC4-210ENST00000496468 TRPV1Q8NER1 839 aa20.83■□□□□ 0.93
TSSC4-210ENST00000496468 CENPFP49454 3210 aa20.82■□□□□ 0.92
TSSC4-210ENST00000496468 IGLV3-22A0A075B6J6 115 aa20.82■□□□□ 0.92
TSSC4-210ENST00000496468 CYP3A7-CYP3A51PA0A087WV96 503 aa20.82■□□□□ 0.92
TSSC4-210ENST00000496468 WNT7AO00755 349 aa20.82■□□□□ 0.92
TSSC4-210ENST00000496468 EDIL3O43854 480 aa20.82■□□□□ 0.92
TSSC4-210ENST00000496468 NEMFO60524 1076 aa20.82■□□□□ 0.92
TSSC4-210ENST00000496468 AKR1A1P14550 325 aa20.82■□□□□ 0.92
TSSC4-210ENST00000496468 CYP3A7P24462 503 aa20.82■□□□□ 0.92
TSSC4-210ENST00000496468 TTLL4Q14679 1199 aa20.82■□□□□ 0.92
TSSC4-210ENST00000496468 CCDC144BQ3MJ40 725 aa20.82■□□□□ 0.92
TSSC4-210ENST00000496468 TAPT1Q6NXT6 567 aa20.82■□□□□ 0.92
TSSC4-210ENST00000496468 CYP2W1Q8TAV3 490 aa20.82■□□□□ 0.92
TSSC4-210ENST00000496468 WDR11Q9BZH6 1224 aa20.82■□□□□ 0.92
TSSC4-210ENST00000496468 MCOLN1Q9GZU1 580 aa20.82■□□□□ 0.92
TSSC4-210ENST00000496468 PDGFCQ9NRA1 345 aa20.82■□□□□ 0.92
TSSC4-210ENST00000496468 FRMPD3Q5JV73 1810 aa20.82■□□□□ 0.92
TSSC4-210ENST00000496468 MEIS1O00470 390 aa20.81■□□□□ 0.92
TSSC4-210ENST00000496468 SLC37A4O43826 429 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms