RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 SYNGAP1Q96PV0 1343 aa15.39■□□□□ 0.05
PTPN7-218ENST00000496197 FAM86B1E9PN63 330 aa15.39■□□□□ 0.05
PTPN7-218ENST00000496197 ADCY3O60266 1144 aa15.39■□□□□ 0.05
PTPN7-218ENST00000496197 TDP2O95551 362 aa15.39■□□□□ 0.05
PTPN7-218ENST00000496197 F13A1P00488 732 aa15.39■□□□□ 0.05
PTPN7-218ENST00000496197 FAM86B2P0C5J1 330 aa15.39■□□□□ 0.05
PTPN7-218ENST00000496197 ITGB5P18084 799 aa15.39■□□□□ 0.05
PTPN7-218ENST00000496197 PTGS1P23219 599 aa15.39■□□□□ 0.05
PTPN7-218ENST00000496197 GNL2Q13823 731 aaKnown RBP15.39■□□□□ 0.05
PTPN7-218ENST00000496197 CTU1Q7Z7A3 348 aaKnown RBP15.39■□□□□ 0.05
PTPN7-218ENST00000496197 TRPV1Q8NER1 839 aa15.39■□□□□ 0.05
PTPN7-218ENST00000496197 RAET1EQ8TD07 263 aa15.39■□□□□ 0.05
PTPN7-218ENST00000496197 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.39■□□□□ 0.05
PTPN7-218ENST00000496197 SLC5A4Q9NY91 659 aa15.39■□□□□ 0.05
PTPN7-218ENST00000496197 DAXXQ9UER7 740 aaPredicted RBP15.39■□□□□ 0.05
PTPN7-218ENST00000496197 IGLV3-22A0A075B6J6 115 aa15.38■□□□□ 0.05
PTPN7-218ENST00000496197 ASB14A6NK59 587 aa15.38■□□□□ 0.05
PTPN7-218ENST00000496197 CYP3A4P08684 503 aa15.38■□□□□ 0.05
PTPN7-218ENST00000496197 CCND2P30279 289 aa15.38■□□□□ 0.05
PTPN7-218ENST00000496197 PDE4DQ08499 809 aa15.38■□□□□ 0.05
PTPN7-218ENST00000496197 SEMA3FQ13275 785 aa15.38■□□□□ 0.05
PTPN7-218ENST00000496197 LETM2Q2VYF4 491 aa15.38■□□□□ 0.05
PTPN7-218ENST00000496197 SH3TC2Q8TF17 1288 aa15.38■□□□□ 0.05
PTPN7-218ENST00000496197 LENG9Q96B70 501 aa15.38■□□□□ 0.05
PTPN7-218ENST00000496197 IWS1Q96ST2 819 aa15.38■□□□□ 0.05
PTPN7-218ENST00000496197 WDR11Q9BZH6 1224 aa15.38■□□□□ 0.05
PTPN7-218ENST00000496197 FTOQ9C0B1 505 aaKnown RBP eCLIP15.38■□□□□ 0.05
PTPN7-218ENST00000496197 PDGFCQ9NRA1 345 aa15.38■□□□□ 0.05
PTPN7-218ENST00000496197 UBIAD1Q9Y5Z9 338 aa15.38■□□□□ 0.05
PTPN7-218ENST00000496197 ADCY6O43306 1168 aa15.37■□□□□ 0.05
PTPN7-218ENST00000496197 SLC37A4O43826 429 aa15.37■□□□□ 0.05
PTPN7-218ENST00000496197 ATP2B1P20020 1258 aa15.37■□□□□ 0.05
PTPN7-218ENST00000496197 PRMT2P55345 433 aa15.37■□□□□ 0.05
PTPN7-218ENST00000496197 ARHGEF6Q15052 776 aa15.37■□□□□ 0.05
PTPN7-218ENST00000496197 STXBP2Q15833 593 aa15.37■□□□□ 0.05
PTPN7-218ENST00000496197 MYSM1Q5VVJ2 828 aa15.37■□□□□ 0.05
PTPN7-218ENST00000496197 MCTP2Q6DN12 878 aa15.37■□□□□ 0.05
PTPN7-218ENST00000496197 TAPT1Q6NXT6 567 aa15.37■□□□□ 0.05
PTPN7-218ENST00000496197 NEK8Q86SG6 692 aa15.37■□□□□ 0.05
PTPN7-218ENST00000496197 PXYLP1Q8TE99 480 aa15.37■□□□□ 0.05
PTPN7-218ENST00000496197 UIMC1Q96RL1 719 aa15.37■□□□□ 0.05
PTPN7-218ENST00000496197 BRCA2P51587 3418 aa15.37■□□□□ 0.05
PTPN7-218ENST00000496197 LOC102724159A0A0B4J2E5 919 aa15.36■□□□□ 0.05
PTPN7-218ENST00000496197 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.36■□□□□ 0.05
PTPN7-218ENST00000496197 ARIH2O95376 493 aa15.36■□□□□ 0.05
PTPN7-218ENST00000496197 ZNF865P0CJ78 1059 aaPredicted RBP15.36■□□□□ 0.05
PTPN7-218ENST00000496197 CYBAP13498 195 aa15.36■□□□□ 0.05
PTPN7-218ENST00000496197 CIITAP33076 1130 aa15.36■□□□□ 0.05
PTPN7-218ENST00000496197 CACNB2Q08289 660 aaPredicted RBP15.36■□□□□ 0.05
PTPN7-218ENST00000496197 PWP2Q15269 919 aaKnown RBP15.36■□□□□ 0.05
PTPN7-218ENST00000496197 FOXD4L6Q3SYB3 417 aaPredicted RBP15.36■□□□□ 0.05
PTPN7-218ENST00000496197 FOXD4L3Q6VB84 417 aaPredicted RBP15.36■□□□□ 0.05
PTPN7-218ENST00000496197 MSL3Q8N5Y2 521 aaKnown RBP15.36■□□□□ 0.05
PTPN7-218ENST00000496197 GJA10Q969M2 543 aa15.36■□□□□ 0.05
PTPN7-218ENST00000496197 INPP4AQ96PE3 977 aaPredicted RBP15.36■□□□□ 0.05
PTPN7-218ENST00000496197 MXRA8Q9BRK3 442 aa15.36■□□□□ 0.05
PTPN7-218ENST00000496197 BCAS3Q9H6U6 928 aa15.36■□□□□ 0.05
PTPN7-218ENST00000496197 EHMT1Q9H9B1 1298 aa15.36■□□□□ 0.05
PTPN7-218ENST00000496197 PRDM10Q9NQV6 1147 aa15.36■□□□□ 0.05
PTPN7-218ENST00000496197 PCDHB6Q9Y5E3 794 aa15.36■□□□□ 0.05
PTPN7-218ENST00000496197 WDR81Q562E7 1941 aa15.36■□□□□ 0.05
PTPN7-218ENST00000496197 CCNT1O60563 726 aaKnown RBP15.35■□□□□ 0.05
PTPN7-218ENST00000496197 ARP10275 920 aa15.35■□□□□ 0.05
PTPN7-218ENST00000496197 GRK4P32298 578 aa15.35■□□□□ 0.05
PTPN7-218ENST00000496197 USP11P51784 963 aa15.35■□□□□ 0.05
PTPN7-218ENST00000496197 ACVR2BQ13705 512 aa15.35■□□□□ 0.05
PTPN7-218ENST00000496197 SEPT14Q6ZU15 432 aa15.35■□□□□ 0.05
PTPN7-218ENST00000496197 BRAPQ7Z569 592 aa15.35■□□□□ 0.05
PTPN7-218ENST00000496197 SLAIN1Q8ND83 568 aa15.35■□□□□ 0.05
PTPN7-218ENST00000496197 LENG1Q96BZ8 264 aaPredicted RBP15.35■□□□□ 0.05
PTPN7-218ENST00000496197 MBOAT7Q96N66 472 aa15.35■□□□□ 0.05
PTPN7-218ENST00000496197 MRVI1Q9Y6F6 885 aa15.35■□□□□ 0.05
PTPN7-218ENST00000496197 CYP3A7-CYP3A51PA0A087WV96 503 aa15.34■□□□□ 0.05
PTPN7-218ENST00000496197 MEIS1O00470 390 aa15.34■□□□□ 0.05
PTPN7-218ENST00000496197 EIF3JO75822 258 aaKnown RBP15.34■□□□□ 0.05
PTPN7-218ENST00000496197 HMGCRP04035 888 aa15.34■□□□□ 0.05
PTPN7-218ENST00000496197 INHAP05111 366 aa15.34■□□□□ 0.05
PTPN7-218ENST00000496197 PRKAR2AP13861 404 aaKnown RBP15.34■□□□□ 0.05
PTPN7-218ENST00000496197 CYP3A7P24462 503 aa15.34■□□□□ 0.05
PTPN7-218ENST00000496197 CCND3P30281 292 aaPredicted RBP15.34■□□□□ 0.05
PTPN7-218ENST00000496197 ADCYAP1R1P41586 468 aa15.34■□□□□ 0.05
PTPN7-218ENST00000496197 SP2Q02086 613 aa15.34■□□□□ 0.05
PTPN7-218ENST00000496197 ZNF174Q15697 407 aa15.34■□□□□ 0.05
PTPN7-218ENST00000496197 CEP55Q53EZ4 464 aa15.34■□□□□ 0.05
PTPN7-218ENST00000496197 TTC38Q5R3I4 469 aa15.34■□□□□ 0.05
PTPN7-218ENST00000496197 GJC2Q5T442 439 aaPredicted RBP15.34■□□□□ 0.05
PTPN7-218ENST00000496197 MAP3K21Q5TCX8 1036 aa15.34■□□□□ 0.05
PTPN7-218ENST00000496197 POTEDQ86YR6 584 aa15.34■□□□□ 0.05
PTPN7-218ENST00000496197 ABHD16BQ9H3Z7 469 aa15.34■□□□□ 0.05
PTPN7-218ENST00000496197 ZSCAN16Q9H4T2 348 aaPredicted RBP15.34■□□□□ 0.05
PTPN7-218ENST00000496197 JADE2Q9NQC1 790 aa15.34■□□□□ 0.05
PTPN7-218ENST00000496197 ZHX1Q9UKY1 873 aaPredicted RBP15.34■□□□□ 0.05
PTPN7-218ENST00000496197 POTEFA5A3E0 1075 aa15.33■□□□□ 0.05
PTPN7-218ENST00000496197 ATP9AO75110 1047 aa15.33■□□□□ 0.05
PTPN7-218ENST00000496197 MCM7P33993 719 aa15.33■□□□□ 0.05
PTPN7-218ENST00000496197 PRR16Q569H4 304 aa15.33■□□□□ 0.05
PTPN7-218ENST00000496197 PPP4R3AQ6IN85 833 aa15.33■□□□□ 0.05
PTPN7-218ENST00000496197 XRRA1Q6P2D8 792 aa15.33■□□□□ 0.05
PTPN7-218ENST00000496197 FBXO46Q6PJ61 603 aaPredicted RBP15.33■□□□□ 0.05
PTPN7-218ENST00000496197 COPS5Q92905 334 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms