RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 KCNJ6P48051 423 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 STAT2P52630 851 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 CACNB3P54284 484 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 TRIM14Q14142 442 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 KCNB1Q14721 858 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 SEPT2Q15019 361 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 KARSQ15046 597 aaKnown RBP7.77□□□□□ -1.17
USP39-219ENST00000496047 PPP4R3AQ6IN85 833 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 KLHL10Q6JEL2 608 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 CNNM4Q6P4Q7 775 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 MOXD1Q6UVY6 613 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 KCTD1Q719H9 257 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 SV2BQ7L1I2 683 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 FAM160B2Q86V87 743 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 LRRC8AQ8IWT6 810 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 TTC13Q8NBP0 860 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 ERMNQ8TAM6 284 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 SPATA20Q8TB22 786 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 KIAA1524Q8TCG1 905 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 CHURC1Q8WUH1 139 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 COA7Q96BR5 231 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 PDGFDQ9GZP0 370 aaPredicted RBP7.77□□□□□ -1.17
USP39-219ENST00000496047 ZNF277Q9NRM2 450 aaPredicted RBP7.77□□□□□ -1.17
USP39-219ENST00000496047 SPTLC3Q9NUV7 552 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 LRWD1Q9UFC0 647 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 DDX25Q9UHL0 483 aaKnown RBP7.77□□□□□ -1.17
USP39-219ENST00000496047 RWDD2AQ9UIY3 292 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 PCDHA1Q9Y5I3 950 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 WDR90Q96KV7 1748 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 PTPRFP10586 1907 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 A0A087WWV3 80 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 GOLGA6L9A6NEM1 432 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 YDJCA8MPS7 323 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 F5H6K3 240 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 GH2P01242 217 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 ASNSP08243 561 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 SKILP12757 684 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 USP11P51784 963 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 ASIC1P78348 528 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 KLRC3Q07444 240 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 PDIA5Q14554 519 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 NCAPHQ15003 741 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 QRICH1Q2TAL8 776 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 PDXDC2PQ6P474 469 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 USP49Q70CQ1 688 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 PPFIBP1Q86W92 1011 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 FCHSD1Q86WN1 690 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 GRAMD1CQ8IYS0 662 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 PXYLP1Q8TE99 480 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 SNX29Q8TEQ0 813 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 MTMR8Q96EF0 704 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 ZNF830Q96NB3 372 aaPredicted RBP7.76□□□□□ -1.17
USP39-219ENST00000496047 FEZ1Q99689 392 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 ZBED2Q9BTP6 218 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 ANO3Q9BYT9 981 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 CPVLQ9H3G5 476 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 DNAJC18Q9H819 358 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 KCNQ5Q9NR82 932 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 FANCLQ9NW38 375 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 ZBTB21Q9ULJ3 1066 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 CTNND2Q9UQB3 1225 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 RABGAP1Q9Y3P9 1069 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 R3HCC1Q9Y3T6 440 aaKnown RBP7.76□□□□□ -1.17
USP39-219ENST00000496047 CTDP1Q9Y5B0 961 aaPredicted RBP7.76□□□□□ -1.17
USP39-219ENST00000496047 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.76□□□□□ -1.177e-6■■□□□ 12.1
USP39-219ENST00000496047 LTBP3Q9NS15 1303 aa7.76□□□□□ -1.17
USP39-219ENST00000496047 ARID2Q68CP9 1835 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 CLRN2A0PK11 232 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 FAM196BA6NMK8 535 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 USP17L10C9JJH3 530 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 TMEM232C9JQI7 657 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 H7C1D1 291 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 TBX3O15119 743 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 FOXN1O15353 648 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 ZSCAN12O43309 604 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 TOMM70O94826 608 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 NDUFB10O96000 172 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 PLCG1P19174 1290 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 SLC16A2P36021 539 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 ZNF76P36508 570 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 TECP42680 631 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 TXKP42681 527 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 CLK2P49760 499 aaKnown RBP7.75□□□□□ -1.17
USP39-219ENST00000496047 MLLT1Q03111 559 aaPredicted RBP7.75□□□□□ -1.17
USP39-219ENST00000496047 NOM1Q5C9Z4 860 aaKnown RBP7.75□□□□□ -1.17
USP39-219ENST00000496047 DCAF15Q66K64 600 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 SPECC1LQ69YQ0 1117 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 CLEC10AQ8IUN9 316 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 VSTM4Q8IW00 320 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 KCTD17Q8N5Z5 321 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 C4orf32Q8N8J7 132 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 IGSF22Q8N9C0 903 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 NELFBQ8WX92 580 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 LARP4BQ92615 738 aaKnown RBP7.75□□□□□ -1.17
USP39-219ENST00000496047 PRMT6Q96LA8 375 aaPredicted RBP7.75□□□□□ -1.17
USP39-219ENST00000496047 TRIM47Q96LD4 638 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 TSG101Q99816 390 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 NAA15Q9BXJ9 866 aaKnown RBP7.75□□□□□ -1.17
USP39-219ENST00000496047 TMEM60Q9H2L4 133 aa7.75□□□□□ -1.17
USP39-219ENST00000496047 KCNF1Q9H3M0 494 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms