RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 PRODHO43272 600 aa8.3□□□□□ -1.08
CCDC39-207ENST00000495817 LTBRP36941 435 aa8.3□□□□□ -1.08
CCDC39-207ENST00000495817 DLG4P78352 724 aa8.3□□□□□ -1.08
CCDC39-207ENST00000495817 ZC3H14Q6PJT7 736 aaKnown RBP8.3□□□□□ -1.08
CCDC39-207ENST00000495817 IER2Q9BTL4 223 aa8.3□□□□□ -1.08
CCDC39-207ENST00000495817 CD320Q9NPF0 282 aa8.3□□□□□ -1.08
CCDC39-207ENST00000495817 GULP1Q9UBP9 304 aa8.3□□□□□ -1.08
CCDC39-207ENST00000495817 MBD1Q9UIS9 605 aaPredicted RBP8.3□□□□□ -1.08
CCDC39-207ENST00000495817 NUDT5Q9UKK9 219 aa8.3□□□□□ -1.08
CCDC39-207ENST00000495817 NOP58Q9Y2X3 529 aaKnown RBP8.3□□□□□ -1.08
CCDC39-207ENST00000495817 RWDD3Q9Y3V2 267 aa8.3□□□□□ -1.08
CCDC39-207ENST00000495817 KRT1P04264 644 aa8.29□□□□□ -1.08
CCDC39-207ENST00000495817 GRIA2P42262 883 aa8.29□□□□□ -1.08
CCDC39-207ENST00000495817 RPL11P62913 178 aaKnown RBP8.29□□□□□ -1.08
CCDC39-207ENST00000495817 PABPC4Q13310 644 aaKnown RBP eCLIP8.29□□□□□ -1.08
CCDC39-207ENST00000495817 TMC6Q7Z403 805 aa8.29□□□□□ -1.08
CCDC39-207ENST00000495817 KRTAP19-1Q8IUB9 90 aa8.29□□□□□ -1.08
CCDC39-207ENST00000495817 Q8N1Y9 231 aa8.29□□□□□ -1.08
CCDC39-207ENST00000495817 MFSD3Q96ES6 412 aa8.29□□□□□ -1.08
CCDC39-207ENST00000495817 TIMM13Q9Y5L4 95 aaPredicted RBP8.29□□□□□ -1.08
CCDC39-207ENST00000495817 COL4A3BPQ9Y5P4 624 aa8.29□□□□□ -1.08
CCDC39-207ENST00000495817 NPFFR2Q9Y5X5 522 aa8.29□□□□□ -1.08
CCDC39-207ENST00000495817 hCG_2014768A0A024R1R8 64 aa8.28□□□□□ -1.08
CCDC39-207ENST00000495817 DBX1A6NMT0 343 aa8.28□□□□□ -1.08
CCDC39-207ENST00000495817 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.28□□□□□ -1.08
CCDC39-207ENST00000495817 VIL1P09327 827 aaKnown RBP8.28□□□□□ -1.08
CCDC39-207ENST00000495817 IGBP1P78318 339 aa8.28□□□□□ -1.08
CCDC39-207ENST00000495817 SF1Q15637 639 aaKnown RBP8.28□□□□□ -1.08
CCDC39-207ENST00000495817 INF2Q27J81 1249 aa8.28□□□□□ -1.08
CCDC39-207ENST00000495817 PRSS53Q2L4Q9 553 aa8.28□□□□□ -1.08
CCDC39-207ENST00000495817 TM4SF20Q53R12 229 aa8.28□□□□□ -1.08
CCDC39-207ENST00000495817 WWC2Q6AWC2 1192 aa8.28□□□□□ -1.08
CCDC39-207ENST00000495817 ATG14Q6ZNE5 492 aa8.28□□□□□ -1.08
CCDC39-207ENST00000495817 ANKLE2Q86XL3 938 aa8.28□□□□□ -1.08
CCDC39-207ENST00000495817 CCDC103Q8IW40 242 aa8.28□□□□□ -1.08
CCDC39-207ENST00000495817 NIM1KQ8IY84 436 aa8.28□□□□□ -1.08
CCDC39-207ENST00000495817 PEX11GQ96HA9 241 aa8.28□□□□□ -1.08
CCDC39-207ENST00000495817 KCNK12Q9HB15 430 aa8.28□□□□□ -1.08
CCDC39-207ENST00000495817 N4BP3O15049 544 aa8.27□□□□□ -1.09
CCDC39-207ENST00000495817 KCNQ2O43526 872 aa8.27□□□□□ -1.09
CCDC39-207ENST00000495817 C1QTNF9P0C862 333 aa8.27□□□□□ -1.09
CCDC39-207ENST00000495817 ZNF124Q15973 351 aa8.27□□□□□ -1.09
CCDC39-207ENST00000495817 TRIM61Q5EBN2 209 aa8.27□□□□□ -1.09
CCDC39-207ENST00000495817 RSPO2Q6UXX9 243 aaPredicted RBP8.27□□□□□ -1.09
CCDC39-207ENST00000495817 KRT26Q7Z3Y9 468 aa8.27□□□□□ -1.09
CCDC39-207ENST00000495817 DCP2Q8IU60 420 aaKnown RBP8.27□□□□□ -1.09
CCDC39-207ENST00000495817 USP33Q8TEY7 942 aa8.27□□□□□ -1.09
CCDC39-207ENST00000495817 GCM1Q9NP62 436 aa8.27□□□□□ -1.09
CCDC39-207ENST00000495817 PCDH12Q9NPG4 1184 aa8.27□□□□□ -1.09
CCDC39-207ENST00000495817 KRTAP9-6A0A140TA67 174 aa8.26□□□□□ -1.09
CCDC39-207ENST00000495817 DLX3O60479 287 aa8.26□□□□□ -1.09
CCDC39-207ENST00000495817 RAPGEF3O95398 923 aa8.26□□□□□ -1.09
CCDC39-207ENST00000495817 SLC9A5Q14940 896 aa8.26□□□□□ -1.09
CCDC39-207ENST00000495817 MROH9Q5TGP6 573 aa8.26□□□□□ -1.09
CCDC39-207ENST00000495817 RIOX2Q8IUF8 465 aa8.26□□□□□ -1.09
CCDC39-207ENST00000495817 PLEKHO2Q8TD55 490 aa8.26□□□□□ -1.09
CCDC39-207ENST00000495817 DPF3Q92784 378 aa8.26□□□□□ -1.09
CCDC39-207ENST00000495817 TSPAN17Q96FV3 270 aa8.26□□□□□ -1.09
CCDC39-207ENST00000495817 TOX2Q96NM4 488 aa8.26□□□□□ -1.09
CCDC39-207ENST00000495817 CNTD2Q9H8S5 307 aa8.26□□□□□ -1.09
CCDC39-207ENST00000495817 GPR27Q9NS67 375 aa8.26□□□□□ -1.09
CCDC39-207ENST00000495817 MARCH2Q9P0N8 246 aa8.26□□□□□ -1.09
CCDC39-207ENST00000495817 FBLN5Q9UBX5 448 aa8.26□□□□□ -1.09
CCDC39-207ENST00000495817 TMEFF2Q9UIK5 374 aaPredicted RBP8.26□□□□□ -1.09
CCDC39-207ENST00000495817 DBR1Q9UK59 544 aaKnown RBP8.26□□□□□ -1.09
CCDC39-207ENST00000495817 F8W031 263 aaPredicted RBP8.25□□□□□ -1.09
CCDC39-207ENST00000495817 PPP1R11O60927 126 aaPredicted RBP8.25□□□□□ -1.09
CCDC39-207ENST00000495817 ZBTB7AO95365 584 aa8.25□□□□□ -1.09
CCDC39-207ENST00000495817 FUCA1P04066 466 aa8.25□□□□□ -1.09
CCDC39-207ENST00000495817 ANAPC15P60006 121 aa8.25□□□□□ -1.09
CCDC39-207ENST00000495817 GABREP78334 506 aa8.25□□□□□ -1.09
CCDC39-207ENST00000495817 KCNA10Q16322 511 aa8.25□□□□□ -1.09
CCDC39-207ENST00000495817 C21orf62-AS1Q17RA5 79 aa8.25□□□□□ -1.09
CCDC39-207ENST00000495817 DENND5AQ6IQ26 1287 aa8.25□□□□□ -1.09
CCDC39-207ENST00000495817 RCBTB1Q8NDN9 531 aa8.25□□□□□ -1.09
CCDC39-207ENST00000495817 ZFYVE21Q9BQ24 234 aa8.25□□□□□ -1.09
CCDC39-207ENST00000495817 RNF38Q9H0F5 515 aa8.25□□□□□ -1.09
CCDC39-207ENST00000495817 INTS7Q9NVH2 962 aaKnown RBP8.25□□□□□ -1.09
CCDC39-207ENST00000495817 H7BY64 318 aa8.24□□□□□ -1.09
CCDC39-207ENST00000495817 EFCAB14O75071 495 aa8.24□□□□□ -1.09
CCDC39-207ENST00000495817 C6orf222P0C671 652 aaPredicted RBP8.24□□□□□ -1.09
CCDC39-207ENST00000495817 SLC6A11P48066 632 aa8.24□□□□□ -1.09
CCDC39-207ENST00000495817 LINC00310P59036 64 aa8.24□□□□□ -1.09
CCDC39-207ENST00000495817 TARBP2Q15633 366 aaKnown RBP8.24□□□□□ -1.09
CCDC39-207ENST00000495817 DHX37Q8IY37 1157 aaKnown RBP8.24□□□□□ -1.09
CCDC39-207ENST00000495817 MZB1Q8WU39 189 aa8.24□□□□□ -1.09
CCDC39-207ENST00000495817 DCAF4Q8WV16 495 aa8.24□□□□□ -1.09
CCDC39-207ENST00000495817 SIGLEC10Q96LC7 697 aa8.24□□□□□ -1.09
CCDC39-207ENST00000495817 CLUHP3Q96NS8 147 aa8.24□□□□□ -1.09
CCDC39-207ENST00000495817 AP5M1Q9H0R1 490 aa8.24□□□□□ -1.09
CCDC39-207ENST00000495817 SMG5Q9UPR3 1016 aaKnown RBP8.24□□□□□ -1.09
CCDC39-207ENST00000495817 X6R8D5 127 aa8.24□□□□□ -1.09
CCDC39-207ENST00000495817 C22orf46C9J442 243 aa8.23□□□□□ -1.09
CCDC39-207ENST00000495817 RFXAPO00287 272 aa8.23□□□□□ -1.09
CCDC39-207ENST00000495817 ARNTLO00327 626 aa8.23□□□□□ -1.09
CCDC39-207ENST00000495817 IRS4O14654 1257 aaPredicted RBP8.23□□□□□ -1.09
CCDC39-207ENST00000495817 CDR1P51861 262 aa8.23□□□□□ -1.09
CCDC39-207ENST00000495817 PRR5P85299 388 aa8.23□□□□□ -1.09
CCDC39-207ENST00000495817 LSAMPQ13449 338 aa8.23□□□□□ -1.09
CCDC39-207ENST00000495817 LDHDQ86WU2 507 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms