RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 PXMP2Q9NR77 195 aa25.72■■□□□ 1.71
HDDC3-203ENST00000494993 KLRF2D3W0D1 207 aa25.71■■□□□ 1.71
HDDC3-203ENST00000494993 OPLAHO14841 1288 aa25.71■■□□□ 1.71
HDDC3-203ENST00000494993 HSD17B4P51659 736 aa25.71■■□□□ 1.71
HDDC3-203ENST00000494993 GHRHRQ02643 423 aa25.71■■□□□ 1.71
HDDC3-203ENST00000494993 PTGISQ16647 500 aa25.71■■□□□ 1.71
HDDC3-203ENST00000494993 CYB5R4Q7L1T6 521 aa25.71■■□□□ 1.71
HDDC3-203ENST00000494993 SESTD1Q86VW0 696 aa25.71■■□□□ 1.71
HDDC3-203ENST00000494993 KAT2BQ92831 832 aa25.71■■□□□ 1.71
HDDC3-203ENST00000494993 MTMR8Q96EF0 704 aa25.71■■□□□ 1.71
HDDC3-203ENST00000494993 DDX41Q9UJV9 622 aaKnown RBP25.71■■□□□ 1.71
HDDC3-203ENST00000494993 EIF3JO75822 258 aaKnown RBP25.7■■□□□ 1.7
HDDC3-203ENST00000494993 NR3C2P08235 984 aa25.7■■□□□ 1.7
HDDC3-203ENST00000494993 GSPT1P15170 499 aaKnown RBP25.7■■□□□ 1.7
HDDC3-203ENST00000494993 CASTP20810 708 aaKnown RBP25.7■■□□□ 1.7
HDDC3-203ENST00000494993 PDE4AP27815 886 aa25.7■■□□□ 1.7
HDDC3-203ENST00000494993 CCDC85BQ15834 202 aaPredicted RBP25.7■■□□□ 1.7
HDDC3-203ENST00000494993 TTC22Q5TAA0 569 aa25.7■■□□□ 1.7
HDDC3-203ENST00000494993 CTAGE1Q96RT6 745 aa25.7■■□□□ 1.7
HDDC3-203ENST00000494993 SLC9A7Q96T83 725 aa25.7■■□□□ 1.7
HDDC3-203ENST00000494993 FTOQ9C0B1 505 aaKnown RBP eCLIP25.7■■□□□ 1.7
HDDC3-203ENST00000494993 THEGQ9P2T0 379 aa25.7■■□□□ 1.7
HDDC3-203ENST00000494993 MAD2L2Q9UI95 211 aa25.7■■□□□ 1.7
HDDC3-203ENST00000494993 TRANK1O15050 2925 aa25.69■■□□□ 1.7
HDDC3-203ENST00000494993 DGKDQ16760 1214 aa25.69■■□□□ 1.7
HDDC3-203ENST00000494993 TMEM67Q5HYA8 995 aa25.69■■□□□ 1.7
HDDC3-203ENST00000494993 GDF6Q6KF10 455 aaPredicted RBP25.69■■□□□ 1.7
HDDC3-203ENST00000494993 CCDC155Q8N6L0 562 aa25.69■■□□□ 1.7
HDDC3-203ENST00000494993 CAGE1Q8TC20 777 aa25.69■■□□□ 1.7
HDDC3-203ENST00000494993 ATXN2LQ8WWM7 1075 aaKnown RBP25.69■■□□□ 1.7
HDDC3-203ENST00000494993 EMID1Q96A84 441 aaPredicted RBP25.69■■□□□ 1.7
HDDC3-203ENST00000494993 MRVI1Q9Y6F6 885 aa25.69■■□□□ 1.7
HDDC3-203ENST00000494993 PRRC2BQ5JSZ5 2229 aaKnown RBP25.68■■□□□ 1.7
HDDC3-203ENST00000494993 PALM3A6NDB9 673 aaPredicted RBP25.68■■□□□ 1.7
HDDC3-203ENST00000494993 ZBTB5O15062 677 aa25.68■■□□□ 1.7
HDDC3-203ENST00000494993 PPP1R11O60927 126 aaPredicted RBP25.68■■□□□ 1.7
HDDC3-203ENST00000494993 PHOSPHO2Q8TCD6 241 aa25.68■■□□□ 1.7
HDDC3-203ENST00000494993 AFAP1L1Q8TED9 768 aa25.68■■□□□ 1.7
HDDC3-203ENST00000494993 MAP3K20Q9NYL2 800 aaKnown RBP25.68■■□□□ 1.7
HDDC3-203ENST00000494993 REV3LO60673 3130 aa25.67■■□□□ 1.7
HDDC3-203ENST00000494993 CA3P07451 260 aa25.67■■□□□ 1.7
HDDC3-203ENST00000494993 TRDNQ13061 729 aa25.67■■□□□ 1.7
HDDC3-203ENST00000494993 PDCD2LQ9BRP1 358 aa25.67■■□□□ 1.7
HDDC3-203ENST00000494993 PCDHA1Q9Y5I3 950 aa25.67■■□□□ 1.7
HDDC3-203ENST00000494993 NCOR1O75376 2440 aa25.67■■□□□ 1.7
HDDC3-203ENST00000494993 LAMC2Q13753 1193 aa25.66■■□□□ 1.7
HDDC3-203ENST00000494993 SAMD3Q8N6K7 520 aa25.66■■□□□ 1.7
HDDC3-203ENST00000494993 PPTC7Q8NI37 304 aa25.66■■□□□ 1.7
HDDC3-203ENST00000494993 DHX38Q92620 1227 aaKnown RBP25.66■■□□□ 1.7
HDDC3-203ENST00000494993 KATNAL1Q9BW62 490 aa25.66■■□□□ 1.7
HDDC3-203ENST00000494993 GTF2IRD1Q9UHL9 959 aa25.66■■□□□ 1.7
HDDC3-203ENST00000494993 MUC3AQ02505 3323 aa25.65■■□□□ 1.7
HDDC3-203ENST00000494993 BAIAP3O94812 1187 aa25.65■■□□□ 1.7
HDDC3-203ENST00000494993 CYP21A2P08686 494 aa25.65■■□□□ 1.7
HDDC3-203ENST00000494993 PSEN2P49810 448 aa25.65■■□□□ 1.7
HDDC3-203ENST00000494993 RBL2Q08999 1139 aa25.65■■□□□ 1.7
HDDC3-203ENST00000494993 GRM4Q14833 912 aa25.65■■□□□ 1.7
HDDC3-203ENST00000494993 STOX1Q6ZVD7 989 aa25.65■■□□□ 1.7
HDDC3-203ENST00000494993 DHX37Q8IY37 1157 aaKnown RBP25.65■■□□□ 1.7
HDDC3-203ENST00000494993 RUFY2Q8WXA3 655 aa25.65■■□□□ 1.7
HDDC3-203ENST00000494993 HDAC6Q9UBN7 1215 aa25.65■■□□□ 1.7
HDDC3-203ENST00000494993 U3KPZ7 1027 aaPredicted RBP25.65■■□□□ 1.7
HDDC3-203ENST00000494993 DOCK5Q9H7D0 1870 aa25.65■■□□□ 1.7
HDDC3-203ENST00000494993 TCF20Q9UGU0 1960 aaKnown RBP25.64■■□□□ 1.7
HDDC3-203ENST00000494993 RGS20O76081 388 aa25.64■■□□□ 1.7
HDDC3-203ENST00000494993 F2P00734 622 aa25.64■■□□□ 1.7
HDDC3-203ENST00000494993 MYCLP12524 364 aaPredicted RBP25.64■■□□□ 1.7
HDDC3-203ENST00000494993 SELPP16109 830 aa25.64■■□□□ 1.7
HDDC3-203ENST00000494993 PTH1RQ03431 593 aa25.64■■□□□ 1.7
HDDC3-203ENST00000494993 SLC35G1Q2M3R5 365 aa25.64■■□□□ 1.7
HDDC3-203ENST00000494993 HOMER1Q86YM7 354 aa25.64■■□□□ 1.7
HDDC3-203ENST00000494993 HERC6Q8IVU3 1022 aa25.64■■□□□ 1.7
HDDC3-203ENST00000494993 C7orf31Q8N865 590 aa25.64■■□□□ 1.7
HDDC3-203ENST00000494993 ASB2Q96Q27 587 aa25.64■■□□□ 1.7
HDDC3-203ENST00000494993 ALG1Q9BT22 464 aa25.64■■□□□ 1.7
HDDC3-203ENST00000494993 RIOX1Q9H6W3 641 aa25.64■■□□□ 1.7
HDDC3-203ENST00000494993 HAS3O00219 553 aa25.63■■□□□ 1.69
HDDC3-203ENST00000494993 IFIT3O14879 490 aaKnown RBP25.63■■□□□ 1.69
HDDC3-203ENST00000494993 ZNF286BP0CG31 522 aa25.63■■□□□ 1.69
HDDC3-203ENST00000494993 CHMLP26374 656 aa25.63■■□□□ 1.69
HDDC3-203ENST00000494993 HOXA13P31271 388 aaPredicted RBP25.63■■□□□ 1.69
HDDC3-203ENST00000494993 MRPS5P82675 430 aaKnown RBP25.63■■□□□ 1.69
HDDC3-203ENST00000494993 TRAF1Q13077 416 aa25.63■■□□□ 1.69
HDDC3-203ENST00000494993 MFSD10Q14728 455 aa25.63■■□□□ 1.69
HDDC3-203ENST00000494993 GPNMBQ14956 572 aa25.63■■□□□ 1.69
HDDC3-203ENST00000494993 PGM5Q15124 567 aa25.63■■□□□ 1.69
HDDC3-203ENST00000494993 KCNV1Q6PIU1 500 aa25.63■■□□□ 1.69
HDDC3-203ENST00000494993 LRRC8DQ7L1W4 858 aa25.63■■□□□ 1.69
HDDC3-203ENST00000494993 COL4A4P53420 1690 aaPredicted RBP25.63■■□□□ 1.69
HDDC3-203ENST00000494993 ERICH2A1L162 156 aa25.62■■□□□ 1.69
HDDC3-203ENST00000494993 KIF28PB7ZC32 967 aa25.62■■□□□ 1.69
HDDC3-203ENST00000494993 PARNO95453 639 aaKnown RBP25.62■■□□□ 1.69
HDDC3-203ENST00000494993 HOXD8P13378 290 aaPredicted RBP25.62■■□□□ 1.69
HDDC3-203ENST00000494993 KCNJ6P48051 423 aa25.62■■□□□ 1.69
HDDC3-203ENST00000494993 KIAA0753Q2KHM9 967 aa25.62■■□□□ 1.69
HDDC3-203ENST00000494993 MYSM1Q5VVJ2 828 aa25.62■■□□□ 1.69
HDDC3-203ENST00000494993 VSIG10LQ86VR7 867 aa25.62■■□□□ 1.69
HDDC3-203ENST00000494993 MICALL1Q8N3F8 863 aa25.62■■□□□ 1.69
HDDC3-203ENST00000494993 IL31RAQ8NI17 732 aa25.62■■□□□ 1.69
HDDC3-203ENST00000494993 PIGSQ96S52 555 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms