RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 HOXD11P31277 338 aaPredicted RBP13.72□□□□□ -0.21
CSNK1E-212ENST00000494610 WDR5P61964 334 aaKnown RBP13.72□□□□□ -0.21
CSNK1E-212ENST00000494610 ZNF200P98182 395 aaPredicted RBP13.72□□□□□ -0.21
CSNK1E-212ENST00000494610 NMIQ13287 307 aaPredicted RBP13.72□□□□□ -0.21
CSNK1E-212ENST00000494610 AAK1Q2M2I8 961 aa13.72□□□□□ -0.21
CSNK1E-212ENST00000494610 MCMDC2Q4G0Z9 681 aa13.72□□□□□ -0.21
CSNK1E-212ENST00000494610 NFRKBQ6P4R8 1299 aa13.72□□□□□ -0.21
CSNK1E-212ENST00000494610 KAT2BQ92831 832 aa13.72□□□□□ -0.21
CSNK1E-212ENST00000494610 ZKSCAN3Q9BRR0 538 aa13.72□□□□□ -0.21
CSNK1E-212ENST00000494610 COL20A1Q9P218 1284 aa13.72□□□□□ -0.21
CSNK1E-212ENST00000494610 ANAPC4Q9UJX5 808 aa13.72□□□□□ -0.21
CSNK1E-212ENST00000494610 NOD1Q9Y239 953 aa13.72□□□□□ -0.21
CSNK1E-212ENST00000494610 CCDC171Q6TFL3 1326 aa13.71□□□□□ -0.21
CSNK1E-212ENST00000494610 A0A0D9SFI3 127 aa13.71□□□□□ -0.21
CSNK1E-212ENST00000494610 PITPNM1O00562 1244 aa13.71□□□□□ -0.21
CSNK1E-212ENST00000494610 ORC4O43929 436 aa13.71□□□□□ -0.21
CSNK1E-212ENST00000494610 NBNO60934 754 aa13.71□□□□□ -0.21
CSNK1E-212ENST00000494610 FGAP02671 866 aa13.71□□□□□ -0.21
CSNK1E-212ENST00000494610 TOP1P11387 765 aaKnown RBP13.71□□□□□ -0.21
CSNK1E-212ENST00000494610 RFC2P35250 354 aa13.71□□□□□ -0.21
CSNK1E-212ENST00000494610 HIC1Q14526 733 aa13.71□□□□□ -0.21
CSNK1E-212ENST00000494610 SEPT14Q6ZU15 432 aa13.71□□□□□ -0.21
CSNK1E-212ENST00000494610 PHOSPHO2Q8TCD6 241 aa13.71□□□□□ -0.21
CSNK1E-212ENST00000494610 TAAR1Q96RJ0 339 aa13.71□□□□□ -0.21
CSNK1E-212ENST00000494610 SUGCTQ9HAC7 445 aa13.71□□□□□ -0.21
CSNK1E-212ENST00000494610 ANO2Q9NQ90 1003 aa13.71□□□□□ -0.21
CSNK1E-212ENST00000494610 MMP3P08254 477 aa13.7□□□□□ -0.22
CSNK1E-212ENST00000494610 FGRP09769 529 aa13.7□□□□□ -0.22
CSNK1E-212ENST00000494610 ARHGAP1Q07960 439 aa13.7□□□□□ -0.22
CSNK1E-212ENST00000494610 ZNF543Q08ER8 600 aa13.7□□□□□ -0.22
CSNK1E-212ENST00000494610 TMEM31Q5JXX7 168 aa13.7□□□□□ -0.22
CSNK1E-212ENST00000494610 CCDC62Q6P9F0 684 aa13.7□□□□□ -0.22
CSNK1E-212ENST00000494610 ZNF589Q86UQ0 364 aaPredicted RBP13.7□□□□□ -0.22
CSNK1E-212ENST00000494610 SCFD2Q8WU76 684 aa13.7□□□□□ -0.22
CSNK1E-212ENST00000494610 COG5Q9UP83 839 aa13.7□□□□□ -0.22
CSNK1E-212ENST00000494610 KIF28PB7ZC32 967 aa13.69□□□□□ -0.22
CSNK1E-212ENST00000494610 KCNJ6P48051 423 aa13.69□□□□□ -0.22
CSNK1E-212ENST00000494610 BFSP2Q13515 415 aa13.69□□□□□ -0.22
CSNK1E-212ENST00000494610 MBTPS1Q14703 1052 aa13.69□□□□□ -0.22
CSNK1E-212ENST00000494610 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.69□□□□□ -0.22
CSNK1E-212ENST00000494610 TBC1D10CQ8IV04 446 aa13.69□□□□□ -0.22
CSNK1E-212ENST00000494610 ZFP91Q96JP5 570 aaPredicted RBP13.69□□□□□ -0.22
CSNK1E-212ENST00000494610 ALG1Q9BT22 464 aa13.69□□□□□ -0.22
CSNK1E-212ENST00000494610 ZBED2Q9BTP6 218 aa13.69□□□□□ -0.22
CSNK1E-212ENST00000494610 OSBPL7Q9BZF2 842 aa13.69□□□□□ -0.22
CSNK1E-212ENST00000494610 HDAC6Q9UBN7 1215 aa13.69□□□□□ -0.22
CSNK1E-212ENST00000494610 LINC01553A4QN01 128 aa13.68□□□□□ -0.22
CSNK1E-212ENST00000494610 ZNF286BP0CG31 522 aa13.68□□□□□ -0.22
CSNK1E-212ENST00000494610 CKBP12277 381 aa13.68□□□□□ -0.22
CSNK1E-212ENST00000494610 RNF20Q5VTR2 975 aa13.68□□□□□ -0.22
CSNK1E-212ENST00000494610 TRAF7Q6Q0C0 670 aa13.68□□□□□ -0.22
CSNK1E-212ENST00000494610 LRRC8DQ7L1W4 858 aa13.68□□□□□ -0.22
CSNK1E-212ENST00000494610 TBC1D32Q96NH3 1257 aa13.68□□□□□ -0.22
CSNK1E-212ENST00000494610 C17orf80Q9BSJ5 609 aa13.68□□□□□ -0.22
CSNK1E-212ENST00000494610 DSCC1Q9BVC3 393 aa13.68□□□□□ -0.22
CSNK1E-212ENST00000494610 C22orf23Q9BZE7 217 aa13.68□□□□□ -0.22
CSNK1E-212ENST00000494610 MYH7BA7E2Y1 1941 aa13.68□□□□□ -0.22
CSNK1E-212ENST00000494610 PIEZO1Q92508 2521 aa13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 NEDD4P46934 1319 aa13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 MYO7AQ13402 2215 aa13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 KIAA1217Q5T5P2 1943 aa13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 NKRFO15226 690 aaKnown RBP eCLIP13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 BAIAP3O94812 1187 aa13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 SNHG28P0DPA3 235 aa13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 HSPD1P10809 573 aaKnown RBP13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 IL9P15248 144 aa13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 SELPP16109 830 aa13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 PTPN11Q06124 597 aaPredicted RBP13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 TRIM71Q2Q1W2 868 aaKnown RBP13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 BRDTQ58F21 947 aaPredicted RBP13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 PPP4R3BQ5MIZ7 849 aa13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 ZNF618Q5T7W0 954 aa13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 SYTL5Q8TDW5 730 aaPredicted RBP13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 U3KPZ7 1027 aaPredicted RBP13.67□□□□□ -0.22
CSNK1E-212ENST00000494610 ZMYM6O95789 1325 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 KPNA6O60684 536 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 GJB5O95377 273 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 GH1P01241 217 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 EIF2AK2P19525 551 aaKnown RBP13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 KCNA5P22460 613 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 RBM25P49756 843 aaKnown RBP13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 PSEN2P49810 448 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 ANAPC15P60006 121 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 ALX1Q15699 326 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 CDC37Q16543 378 aaPredicted RBP13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 CNKSR3Q6P9H4 555 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 DNERQ8NFT8 737 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 AFAP1L1Q8TED9 768 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 ANKS1AQ92625 1134 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 BCAS3Q9H6U6 928 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 UBE2ZQ9H832 354 aaPredicted RBP13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 VAT1LQ9HCJ6 419 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 TCP11L1Q9NUJ3 509 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 GTF2IRD1Q9UHL9 959 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 CTNNA3Q9UI47 895 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 HCN4Q9Y3Q4 1203 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 SIP14410 1827 aa13.66□□□□□ -0.22
CSNK1E-212ENST00000494610 WDR19Q8NEZ3 1342 aa13.65□□□□□ -0.22
CSNK1E-212ENST00000494610 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms