RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 SDF4Q9BRK5 362 aa23.29■■□□□ 1.32
KPNA1-210ENST00000494339 TTC12Q9H892 705 aaPredicted RBP23.29■■□□□ 1.32
KPNA1-210ENST00000494339 KCNMB3Q9NPA1 279 aa23.29■■□□□ 1.32
KPNA1-210ENST00000494339 ABT1Q9ULW3 272 aaKnown RBP23.29■■□□□ 1.32
KPNA1-210ENST00000494339 A0A087X0B3 334 aa23.29■■□□□ 1.32
KPNA1-210ENST00000494339 TMEM266Q2M3C6 531 aa23.29■■□□□ 1.32
KPNA1-210ENST00000494339 LONRF3Q496Y0 759 aa23.29■■□□□ 1.32
KPNA1-210ENST00000494339 TLL2Q9Y6L7 1015 aa23.29■■□□□ 1.32
KPNA1-210ENST00000494339 IGLV3-22A0A075B6J6 115 aa23.28■■□□□ 1.32
KPNA1-210ENST00000494339 ERCC3P19447 782 aa23.28■■□□□ 1.32
KPNA1-210ENST00000494339 ANKRD35Q8N283 1001 aa23.28■■□□□ 1.32
KPNA1-210ENST00000494339 R3HDMLQ9H3Y0 253 aa23.28■■□□□ 1.32
KPNA1-210ENST00000494339 TSPY26PQ9H489 355 aa23.28■■□□□ 1.32
KPNA1-210ENST00000494339 PXMP2Q9NR77 195 aa23.28■■□□□ 1.32
KPNA1-210ENST00000494339 FBXO40Q9UH90 709 aa23.28■■□□□ 1.32
KPNA1-210ENST00000494339 TOMM70O94826 608 aa23.27■■□□□ 1.32
KPNA1-210ENST00000494339 FXR2P51116 673 aaKnown RBP eCLIP23.27■■□□□ 1.32
KPNA1-210ENST00000494339 CEP55Q53EZ4 464 aa23.27■■□□□ 1.32
KPNA1-210ENST00000494339 ARHGEF16Q5VV41 709 aa23.27■■□□□ 1.32
KPNA1-210ENST00000494339 IGSF22Q8N9C0 903 aa23.27■■□□□ 1.32
KPNA1-210ENST00000494339 ETNPPLQ8TBG4 499 aa23.27■■□□□ 1.32
KPNA1-210ENST00000494339 FRMPD4Q14CM0 1322 aa23.27■■□□□ 1.32
KPNA1-210ENST00000494339 POTEMA6NI47 508 aa23.27■■□□□ 1.32
KPNA1-210ENST00000494339 TXLNAP40222 546 aa23.27■■□□□ 1.32
KPNA1-210ENST00000494339 ERVK-9P63128 1117 aa23.27■■□□□ 1.32
KPNA1-210ENST00000494339 ERVK-24P63145 666 aa23.27■■□□□ 1.32
KPNA1-210ENST00000494339 PGM5Q15124 567 aa23.27■■□□□ 1.32
KPNA1-210ENST00000494339 ERCC4Q92889 916 aaPredicted RBP23.27■■□□□ 1.32
KPNA1-210ENST00000494339 DHX58Q96C10 678 aa23.27■■□□□ 1.32
KPNA1-210ENST00000494339 AK8Q96MA6 479 aa23.27■■□□□ 1.32
KPNA1-210ENST00000494339 TIGD1Q96MW7 591 aa23.27■■□□□ 1.32
KPNA1-210ENST00000494339 PCDHA12Q9UN75 941 aa23.27■■□□□ 1.32
KPNA1-210ENST00000494339 MSH4O15457 936 aa23.26■■□□□ 1.31
KPNA1-210ENST00000494339 XRCC6P12956 609 aaKnown RBP eCLIP23.26■■□□□ 1.31
KPNA1-210ENST00000494339 UBA7P41226 1012 aa23.26■■□□□ 1.31
KPNA1-210ENST00000494339 PCNX4Q63HM2 1172 aa23.26■■□□□ 1.31
KPNA1-210ENST00000494339 KRBA2Q6ZNG9 492 aa23.26■■□□□ 1.31
KPNA1-210ENST00000494339 PLA2G4DQ86XP0 818 aa23.26■■□□□ 1.31
KPNA1-210ENST00000494339 CNNM3Q8NE01 707 aa23.26■■□□□ 1.31
KPNA1-210ENST00000494339 GTF3C2Q8WUA4 911 aaPredicted RBP23.26■■□□□ 1.31
KPNA1-210ENST00000494339 PDCD2LQ9BRP1 358 aa23.26■■□□□ 1.31
KPNA1-210ENST00000494339 SERTAD1Q9UHV2 236 aa23.26■■□□□ 1.31
KPNA1-210ENST00000494339 LCTP09848 1927 aa23.26■■□□□ 1.31
KPNA1-210ENST00000494339 CTAGE5O15320 804 aa23.25■■□□□ 1.31
KPNA1-210ENST00000494339 SLC25A27O95847 323 aa23.25■■□□□ 1.31
KPNA1-210ENST00000494339 MYCLP12524 364 aaPredicted RBP23.25■■□□□ 1.31
KPNA1-210ENST00000494339 KARSQ15046 597 aaKnown RBP23.25■■□□□ 1.31
KPNA1-210ENST00000494339 ZRSR1Q15695 479 aaKnown RBP23.25■■□□□ 1.31
KPNA1-210ENST00000494339 SLFN12Q8IYM2 578 aa23.25■■□□□ 1.31
KPNA1-210ENST00000494339 ANKRD13CQ8N6S4 541 aa23.25■■□□□ 1.31
KPNA1-210ENST00000494339 RASSF8Q8NHQ8 419 aa23.25■■□□□ 1.31
KPNA1-210ENST00000494339 RAB34Q9BZG1 259 aa23.25■■□□□ 1.31
KPNA1-210ENST00000494339 LRWD1Q9UFC0 647 aa23.25■■□□□ 1.31
KPNA1-210ENST00000494339 TMEM88BA6NKF7 163 aa23.25■■□□□ 1.31
KPNA1-210ENST00000494339 TBX3O15119 743 aa23.25■■□□□ 1.31
KPNA1-210ENST00000494339 SLC10A3P09131 477 aa23.25■■□□□ 1.31
KPNA1-210ENST00000494339 MRPS9P82933 396 aaKnown RBP23.25■■□□□ 1.31
KPNA1-210ENST00000494339 RBM43Q6ZSC3 357 aaKnown RBP23.25■■□□□ 1.31
KPNA1-210ENST00000494339 PFASO15067 1338 aa23.24■■□□□ 1.31
KPNA1-210ENST00000494339 TESPA1A2RU30 521 aaPredicted RBP23.24■■□□□ 1.31
KPNA1-210ENST00000494339 MANSC4A6NHS7 340 aaPredicted RBP23.24■■□□□ 1.31
KPNA1-210ENST00000494339 ITGB5P18084 799 aa23.24■■□□□ 1.31
KPNA1-210ENST00000494339 WDR78Q5VTH9 848 aa23.24■■□□□ 1.31
KPNA1-210ENST00000494339 NSUN6Q8TEA1 469 aaKnown RBP23.24■■□□□ 1.31
KPNA1-210ENST00000494339 PARK7Q99497 189 aaKnown RBP23.24■■□□□ 1.31
KPNA1-210ENST00000494339 MXRA8Q9BRK3 442 aa23.24■■□□□ 1.31
KPNA1-210ENST00000494339 CCSER1Q9C0I3 900 aa23.24■■□□□ 1.31
KPNA1-210ENST00000494339 MEIS1O00470 390 aa23.23■■□□□ 1.31
KPNA1-210ENST00000494339 ACTN4O43707 911 aaKnown RBP23.23■■□□□ 1.31
KPNA1-210ENST00000494339 PDIA5Q14554 519 aa23.23■■□□□ 1.31
KPNA1-210ENST00000494339 CABP7Q86V35 215 aa23.23■■□□□ 1.31
KPNA1-210ENST00000494339 GPRC5AQ8NFJ5 357 aa23.23■■□□□ 1.31
KPNA1-210ENST00000494339 FAM20AQ96MK3 541 aa23.23■■□□□ 1.31
KPNA1-210ENST00000494339 MAF1Q9H063 256 aa23.23■■□□□ 1.31
KPNA1-210ENST00000494339 ARP10275 920 aa23.23■■□□□ 1.31
KPNA1-210ENST00000494339 COPB2P35606 906 aa23.23■■□□□ 1.31
KPNA1-210ENST00000494339 CNTN2Q02246 1040 aa23.23■■□□□ 1.31
KPNA1-210ENST00000494339 PLIN2Q99541 437 aa23.23■■□□□ 1.31
KPNA1-210ENST00000494339 PORCNQ9H237 461 aa23.23■■□□□ 1.31
KPNA1-210ENST00000494339 IGF2BP3O00425 579 aaKnown RBP eCLIP23.22■■□□□ 1.31
KPNA1-210ENST00000494339 FOXN1O15353 648 aa23.22■■□□□ 1.31
KPNA1-210ENST00000494339 GCLCP48506 637 aaPredicted RBP23.22■■□□□ 1.31
KPNA1-210ENST00000494339 SETQ01105 290 aaPredicted RBP23.22■■□□□ 1.31
KPNA1-210ENST00000494339 MMTAG2Q9BU76 263 aaKnown RBP23.22■■□□□ 1.31
KPNA1-210ENST00000494339 WDR11Q9BZH6 1224 aa23.22■■□□□ 1.31
KPNA1-210ENST00000494339 DISC1Q9NRI5 854 aa23.22■■□□□ 1.31
KPNA1-210ENST00000494339 FAM155AB1AL88 458 aaPredicted RBP23.21■■□□□ 1.31
KPNA1-210ENST00000494339 NR3C2P08235 984 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 CCDC192P0DO97 292 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 GRM1Q13255 1194 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 E2F4Q16254 413 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 PAXIP1Q6ZW49 1069 aaPredicted RBP23.21■■□□□ 1.31
KPNA1-210ENST00000494339 IQUBQ8NA54 791 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 RBSNQ9H1K0 784 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 EFCC1Q9HA90 598 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 CCDC39Q9UFE4 941 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 UBIAD1Q9Y5Z9 338 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 CCND2P30279 289 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 STAT6P42226 847 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 PNOCQ13519 176 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms