RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 LZICQ8WZA0 190 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 P3H4Q92791 437 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 L3MBTL3Q96JM7 780 aaPredicted RBP7.53□□□□□ -1.2
VPS13B-205ENST00000493587 NLRP3Q96P20 1036 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 CCDC87Q9NVE4 849 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 TSPYL4Q9UJ04 414 aa7.53□□□□□ -1.2
VPS13B-205ENST00000493587 UBN2Q6ZU65 1347 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 H0Y3Z8 333 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 GIGYF1O75420 1035 aaPredicted RBP7.52□□□□□ -1.21
VPS13B-205ENST00000493587 VAV2P52735 878 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 MCL1Q07820 350 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 FLIIQ13045 1269 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 KLHL10Q6JEL2 608 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 PPP1R14BQ96C90 147 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 ZIM3Q96PE6 472 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 ARHGEF38Q9NXL2 777 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 SAMD15Q9P1V8 674 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 GGA2Q9UJY4 613 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 TTF2Q9UNY4 1162 aaKnown RBP7.52□□□□□ -1.21
VPS13B-205ENST00000493587 TMEM247A6NEH6 219 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 TMEM221A6NGB7 291 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 CCDC160A6NGH7 325 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 PDLIM1O00151 329 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 CCDC166P0CW27 439 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 HARSP12081 509 aaKnown RBP7.52□□□□□ -1.21
VPS13B-205ENST00000493587 MTTPP55157 894 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 C6orf89Q6UWU4 347 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 ZNF554Q86TJ5 538 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 ERMNQ8TAM6 284 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.52□□□□□ -1.21
VPS13B-205ENST00000493587 OXCT2Q9BYC2 517 aaPredicted RBP7.52□□□□□ -1.21
VPS13B-205ENST00000493587 CROTQ9UKG9 612 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 ITIH6Q6UXX5 1313 aa7.52□□□□□ -1.21
VPS13B-205ENST00000493587 UBR3Q6ZT12 1888 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 CCT8L1PA6NM43 557 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 PYGMP11217 842 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 ETS2P15036 469 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 KCNA3P22001 575 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 TMOD1P28289 359 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 SMARCA1P28370 1054 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 CCT4P50991 539 aaKnown RBP7.51□□□□□ -1.21
VPS13B-205ENST00000493587 BTG3Q14201 252 aaPredicted RBP7.51□□□□□ -1.21
VPS13B-205ENST00000493587 QPCTQ16769 361 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 RUFY4Q6ZNE9 571 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 CCDC129Q6ZRS4 1044 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 HELBQ8NG08 1087 aaPredicted RBP7.51□□□□□ -1.21
VPS13B-205ENST00000493587 BHMTQ93088 406 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 SLC35B4Q969S0 331 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 IFT74Q96LB3 600 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 CEP295NLQ96MC4 621 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 SENP2Q9HC62 589 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 GGT7Q9UJ14 662 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 SPO11Q9Y5K1 396 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 TMEM110-MUSTN1A8MSY1 372 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 CCNFP41002 786 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 ALDH5A1P51649 535 aaPredicted RBP7.51□□□□□ -1.21
VPS13B-205ENST00000493587 EPHB4P54760 987 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.51□□□□□ -1.21
VPS13B-205ENST00000493587 C6orf183Q5T699 404 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 DPY19L2Q6NUT2 758 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 FAM133AQ8N9E0 248 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 TC2NQ8N9U0 490 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 SLC43A3Q8NBI5 491 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 BPIFA3Q9BQP9 254 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 PAGR1Q9BTK6 254 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.51□□□□□ -1.21
VPS13B-205ENST00000493587 RMND1Q9NWS8 449 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 PRAMEF22A3QJZ6 481 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 UNCXA6NJT0 531 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 A8MUI8 341 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 IGF2BP3O00425 579 aaKnown RBP eCLIP7.51□□□□□ -1.21
VPS13B-205ENST00000493587 SLC27A2O14975 620 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 ZFYP08048 801 aaPredicted RBP7.51□□□□□ -1.21
VPS13B-205ENST00000493587 RFX5P48382 616 aaPredicted RBP7.51□□□□□ -1.21
VPS13B-205ENST00000493587 KCNJ2P63252 427 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 RIPK1Q13546 671 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 RCN2Q14257 317 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 KRT72Q14CN4 511 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 INAQ16352 499 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 DDB1Q16531 1140 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 FAM47EQ6ZV65 393 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 C3orf67Q6ZVT6 689 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 CACNA2D4Q7Z3S7 1137 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 KRT27Q7Z3Y8 459 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 ZC3H18Q86VM9 953 aaKnown RBP7.51□□□□□ -1.21
VPS13B-205ENST00000493587 HPS3Q969F9 1004 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 TRAPPC9Q96Q05 1148 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 DDX23Q9BUQ8 820 aaKnown RBP7.51□□□□□ -1.21
VPS13B-205ENST00000493587 SLC7A5P2Q9GIP4 190 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 PHAXQ9H814 394 aaKnown RBP7.51□□□□□ -1.21
VPS13B-205ENST00000493587 AASDHPPTQ9NRN7 309 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 GMEB1Q9Y692 573 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 RGPD3A6NKT7 1758 aaPredicted RBP7.51□□□□□ -1.21
VPS13B-205ENST00000493587 RGPD4Q7Z3J3 1758 aa7.51□□□□□ -1.21
VPS13B-205ENST00000493587 CACNA1SQ13698 1873 aa7.5□□□□□ -1.21
VPS13B-205ENST00000493587 QSER1Q2KHR3 1735 aa7.5□□□□□ -1.21
VPS13B-205ENST00000493587 TARSL2A2RTX5 802 aaKnown RBP7.5□□□□□ -1.21
VPS13B-205ENST00000493587 PENKP01210 267 aaPredicted RBP7.5□□□□□ -1.21
VPS13B-205ENST00000493587 SCG2P13521 617 aa7.5□□□□□ -1.21
VPS13B-205ENST00000493587 NQO1P15559 274 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms