RNA–Protein interactions for RNA: ENST00000493583.5

TFE3-204, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 3,279 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-204ENST00000493583 STIM2Q9P246 746 aa15.27■□□□□ 0.03
TFE3-204ENST00000493583 PCDHA6Q9UN73 950 aa15.27■□□□□ 0.03
TFE3-204ENST00000493583 PCDHA8Q9Y5H6 950 aa15.27■□□□□ 0.03
TFE3-204ENST00000493583 ZNF233A6NK53 670 aa15.27■□□□□ 0.03
TFE3-204ENST00000493583 ZBED6P86452 979 aa15.27■□□□□ 0.03
TFE3-204ENST00000493583 PRPF4BQ13523 1007 aaKnown RBP15.27■□□□□ 0.03
TFE3-204ENST00000493583 FAM133AQ8N9E0 248 aa15.27■□□□□ 0.03
TFE3-204ENST00000493583 AENQ8WTP8 325 aaKnown RBP15.27■□□□□ 0.03
TFE3-204ENST00000493583 TRIM9Q9C026 710 aa15.27■□□□□ 0.03
TFE3-204ENST00000493583 DPH5Q9H2P9 285 aa15.27■□□□□ 0.03
TFE3-204ENST00000493583 IL17RBQ9NRM6 502 aa15.27■□□□□ 0.03
TFE3-204ENST00000493583 TRAF5O00463 557 aa15.26■□□□□ 0.03
TFE3-204ENST00000493583 GNAT2P19087 354 aa15.26■□□□□ 0.03
TFE3-204ENST00000493583 PPFIA1Q13136 1202 aa15.26■□□□□ 0.03
TFE3-204ENST00000493583 PFKFB3Q16875 520 aaPredicted RBP15.26■□□□□ 0.03
TFE3-204ENST00000493583 MCTP2Q6DN12 878 aa15.26■□□□□ 0.03
TFE3-204ENST00000493583 FAM196AQ6ZSG2 479 aa15.26■□□□□ 0.03
TFE3-204ENST00000493583 KCNK18Q7Z418 384 aa15.26■□□□□ 0.03
TFE3-204ENST00000493583 C4orf32Q8N8J7 132 aa15.26■□□□□ 0.03
TFE3-204ENST00000493583 TLR10Q9BXR5 811 aa15.26■□□□□ 0.03
TFE3-204ENST00000493583 IKZF4Q9H2S9 585 aa15.26■□□□□ 0.03
TFE3-204ENST00000493583 NDST4Q9H3R1 872 aa15.26■□□□□ 0.03
TFE3-204ENST00000493583 PDS5AQ29RF7 1337 aaKnown RBP15.26■□□□□ 0.03
TFE3-204ENST00000493583 KLRC1P26715 233 aa15.26■□□□□ 0.03
TFE3-204ENST00000493583 HIBADHP31937 336 aaKnown RBP15.26■□□□□ 0.03
TFE3-204ENST00000493583 MDM1Q8TC05 714 aa15.26■□□□□ 0.03
TFE3-204ENST00000493583 MYO1AQ9UBC5 1043 aa15.26■□□□□ 0.03
TFE3-204ENST00000493583 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.26■□□□□ 0.03
TFE3-204ENST00000493583 TLDC2A0PJX2 215 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 C6orf229H3BNL8 230 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 KCNK3O14649 394 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 TSPY3P0CV98 308 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 TSPY8P0CW00 308 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 CDC25CP30307 473 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 CCDC40Q4G0X9 1142 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 RCSD1Q6JBY9 416 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 MMS22LQ6ZRQ5 1243 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 ARHGEF1Q92888 912 aaKnown RBP15.25■□□□□ 0.03
TFE3-204ENST00000493583 ZNF622Q969S3 477 aaKnown RBP eCLIP15.25■□□□□ 0.03
TFE3-204ENST00000493583 CDK5RAP3Q96JB5 506 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 MXD3Q9BW11 206 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 SLC24A3Q9HC58 644 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 TOM1O60784 492 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 TDP2O95551 362 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 RPSAP08865 295 aaKnown RBP15.25■□□□□ 0.03
TFE3-204ENST00000493583 TAL1P17542 331 aaPredicted RBP15.25■□□□□ 0.03
TFE3-204ENST00000493583 FLT3P36888 993 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 UBLCP1Q8WVY7 318 aaPredicted RBP15.25■□□□□ 0.03
TFE3-204ENST00000493583 DDX47Q9H0S4 455 aaKnown RBP15.25■□□□□ 0.03
TFE3-204ENST00000493583 SH2D4AQ9H788 454 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 MYMKA6NI61 221 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 AARSP49588 968 aaKnown RBP eCLIP15.25■□□□□ 0.03
TFE3-204ENST00000493583 TBCKQ8TEA7 893 aa15.25■□□□□ 0.03
TFE3-204ENST00000493583 CELF4Q9BZC1 486 aaKnown RBP15.25■□□□□ 0.03
TFE3-204ENST00000493583 SMCO2A6NFE2 343 aa15.24■□□□□ 0.03
TFE3-204ENST00000493583 SEMA3EO15041 775 aa15.24■□□□□ 0.03
TFE3-204ENST00000493583 BUB1BO60566 1050 aaPredicted RBP15.24■□□□□ 0.03
TFE3-204ENST00000493583 TNNI2P48788 182 aa15.24■□□□□ 0.03
TFE3-204ENST00000493583 DHX9Q08211 1270 aaKnown RBP15.24■□□□□ 0.03
TFE3-204ENST00000493583 TRIM14Q14142 442 aa15.24■□□□□ 0.03
TFE3-204ENST00000493583 UBE2SQ16763 222 aa15.24■□□□□ 0.03
TFE3-204ENST00000493583 KIAA0753Q2KHM9 967 aa15.24■□□□□ 0.03
TFE3-204ENST00000493583 GIMAP8Q8ND71 665 aaPredicted RBP15.24■□□□□ 0.03
TFE3-204ENST00000493583 GIMAP7Q8NHV1 300 aa15.24■□□□□ 0.03
TFE3-204ENST00000493583 CASKIN2Q8WXE0 1202 aa15.24■□□□□ 0.03
TFE3-204ENST00000493583 USP21Q9UK80 565 aa15.24■□□□□ 0.03
TFE3-204ENST00000493583 RTCBQ9Y3I0 505 aaKnown RBP15.24■□□□□ 0.03
TFE3-204ENST00000493583 TNS2Q63HR2 1409 aa15.24■□□□□ 0.03
TFE3-204ENST00000493583 OPLAHO14841 1288 aa15.24■□□□□ 0.03
TFE3-204ENST00000493583 CEP104O60308 925 aa15.24■□□□□ 0.03
TFE3-204ENST00000493583 MMP14P50281 582 aa15.24■□□□□ 0.03
TFE3-204ENST00000493583 GOPCQ9HD26 462 aa15.24■□□□□ 0.03
TFE3-204ENST00000493583 PCDHA4Q9UN74 947 aa15.24■□□□□ 0.03
TFE3-204ENST00000493583 PDHBP11177 359 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 CCNE1P24864 410 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 LSP1P33241 339 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 SF3B2Q13435 895 aaKnown RBP15.23■□□□□ 0.03
TFE3-204ENST00000493583 TCERG1LQ5VWI1 586 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 MSL1Q68DK7 614 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 TRIM58Q8NG06 486 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 TBC1D31Q96DN5 1066 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 PIGSQ96S52 555 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 LSM14BQ9BX40 385 aaKnown RBP15.23■□□□□ 0.03
TFE3-204ENST00000493583 TTYH3Q9C0H2 523 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 FBXO3Q9UK99 471 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 PLAAQ9Y263 795 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 RAD51CO43502 376 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 EEF1GP26641 437 aaKnown RBP15.23■□□□□ 0.03
TFE3-204ENST00000493583 PARP10Q53GL7 1025 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 KLHDC7AQ5VTJ3 777 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 ALS2CR12Q96Q35 445 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 GPCPD1Q9NPB8 672 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 USP54Q70EL1 1684 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 PHF20L1A8MW92 1017 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 KLRF2D3W0D1 207 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 LONP1P36776 959 aaKnown RBP15.23■□□□□ 0.03
TFE3-204ENST00000493583 CCDC113Q9H0I3 377 aa15.23■□□□□ 0.03
TFE3-204ENST00000493583 RBM28Q9NW13 759 aaKnown RBP15.23■□□□□ 0.03
TFE3-204ENST00000493583 MYH6P13533 1939 aa15.22■□□□□ 0.03
TFE3-204ENST00000493583 A0A087X0T9 212 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms