RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 DNERQ8NFT8 737 aa19.6■□□□□ 0.73
LIME1-208ENST00000493265 MAML3Q96JK9 1138 aa19.6■□□□□ 0.73
LIME1-208ENST00000493265 DOCK3Q8IZD9 2030 aa19.59■□□□□ 0.73
LIME1-208ENST00000493265 ADCY3O60266 1144 aa19.59■□□□□ 0.73
LIME1-208ENST00000493265 ARHGAP4P98171 946 aa19.59■□□□□ 0.73
LIME1-208ENST00000493265 RESTQ13127 1097 aa19.59■□□□□ 0.73
LIME1-208ENST00000493265 UBE2Q1Q7Z7E8 422 aa19.59■□□□□ 0.73
LIME1-208ENST00000493265 TEX2Q8IWB9 1127 aa19.59■□□□□ 0.73
LIME1-208ENST00000493265 U2AF1L4Q8WU68 220 aaKnown RBP19.59■□□□□ 0.73
LIME1-208ENST00000493265 PDCD2LQ9BRP1 358 aa19.59■□□□□ 0.73
LIME1-208ENST00000493265 HTATIP2Q9BUP3 242 aa19.59■□□□□ 0.73
LIME1-208ENST00000493265 FLRT1Q9NZU1 646 aa19.59■□□□□ 0.73
LIME1-208ENST00000493265 RPTORQ8N122 1335 aa19.58■□□□□ 0.73
LIME1-208ENST00000493265 FARP2O94887 1054 aaPredicted RBP19.58■□□□□ 0.72
LIME1-208ENST00000493265 NR3C2P08235 984 aa19.58■□□□□ 0.72
LIME1-208ENST00000493265 CCND2P30279 289 aa19.58■□□□□ 0.72
LIME1-208ENST00000493265 DDIT3P35638 169 aa19.58■□□□□ 0.72
LIME1-208ENST00000493265 ZNF76P36508 570 aa19.58■□□□□ 0.72
LIME1-208ENST00000493265 SREBF1P36956 1147 aa19.58■□□□□ 0.72
LIME1-208ENST00000493265 LETM2Q2VYF4 491 aa19.58■□□□□ 0.72
LIME1-208ENST00000493265 FAM173BQ6P4H8 233 aa19.58■□□□□ 0.72
LIME1-208ENST00000493265 EEPD1Q7L9B9 569 aa19.58■□□□□ 0.72
LIME1-208ENST00000493265 MPHOSPH6Q99547 160 aaKnown RBP19.58■□□□□ 0.72
LIME1-208ENST00000493265 RTEL1Q9NZ71 1219 aa19.58■□□□□ 0.72
LIME1-208ENST00000493265 DIS3Q9Y2L1 958 aaKnown RBP19.58■□□□□ 0.72
LIME1-208ENST00000493265 ZDHHC9Q9Y397 364 aa19.58■□□□□ 0.72
LIME1-208ENST00000493265 SZT2Q5T011 3432 aa19.57■□□□□ 0.72
LIME1-208ENST00000493265 ASB14A6NK59 587 aa19.57■□□□□ 0.72
LIME1-208ENST00000493265 B4DLN1 442 aa19.57■□□□□ 0.72
LIME1-208ENST00000493265 BRD1O95696 1058 aa19.57■□□□□ 0.72
LIME1-208ENST00000493265 F13A1P00488 732 aa19.57■□□□□ 0.72
LIME1-208ENST00000493265 INHAP05111 366 aa19.57■□□□□ 0.72
LIME1-208ENST00000493265 HOXC6P09630 235 aa19.57■□□□□ 0.72
LIME1-208ENST00000493265 PDIA4P13667 645 aaKnown RBP19.57■□□□□ 0.72
LIME1-208ENST00000493265 ARMCX2Q7L311 632 aa19.57■□□□□ 0.72
LIME1-208ENST00000493265 NOL7Q9UMY1 257 aaKnown RBP19.57■□□□□ 0.72
LIME1-208ENST00000493265 FRMPD4Q14CM0 1322 aa19.56■□□□□ 0.72
LIME1-208ENST00000493265 CYP2C19P33261 490 aa19.56■□□□□ 0.72
LIME1-208ENST00000493265 NUCB2P80303 420 aa19.56■□□□□ 0.72
LIME1-208ENST00000493265 NBR1Q14596 966 aa19.56■□□□□ 0.72
LIME1-208ENST00000493265 STXBP2Q15833 593 aa19.56■□□□□ 0.72
LIME1-208ENST00000493265 PCNX4Q63HM2 1172 aa19.56■□□□□ 0.72
LIME1-208ENST00000493265 BRAPQ7Z569 592 aa19.56■□□□□ 0.72
LIME1-208ENST00000493265 NEK8Q86SG6 692 aa19.56■□□□□ 0.72
LIME1-208ENST00000493265 IWS1Q96ST2 819 aa19.56■□□□□ 0.72
LIME1-208ENST00000493265 TINF2Q9BSI4 451 aa19.56■□□□□ 0.72
LIME1-208ENST00000493265 ZSCAN16Q9H4T2 348 aaPredicted RBP19.56■□□□□ 0.72
LIME1-208ENST00000493265 CCNT1O60563 726 aaKnown RBP19.55■□□□□ 0.72
LIME1-208ENST00000493265 SGPL1O95470 568 aa19.55■□□□□ 0.72
LIME1-208ENST00000493265 XRCC5P13010 732 aaKnown RBP19.55■□□□□ 0.72
LIME1-208ENST00000493265 RANBP2P49792 3224 aaKnown RBP19.55■□□□□ 0.72
LIME1-208ENST00000493265 MRPS9P82933 396 aaKnown RBP19.55■□□□□ 0.72
LIME1-208ENST00000493265 ZNF467Q7Z7K2 595 aaPredicted RBP19.55■□□□□ 0.72
LIME1-208ENST00000493265 VSIG10LQ86VR7 867 aa19.55■□□□□ 0.72
LIME1-208ENST00000493265 FBXO16Q8IX29 292 aaPredicted RBP19.55■□□□□ 0.72
LIME1-208ENST00000493265 TRIB2Q92519 343 aa19.55■□□□□ 0.72
LIME1-208ENST00000493265 UIMC1Q96RL1 719 aa19.55■□□□□ 0.72
LIME1-208ENST00000493265 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.55■□□□□ 0.72
LIME1-208ENST00000493265 CHMP5Q9NZZ3 219 aa19.55■□□□□ 0.72
LIME1-208ENST00000493265 MYH7BA7E2Y1 1941 aa19.55■□□□□ 0.72
LIME1-208ENST00000493265 WNT7AO00755 349 aa19.54■□□□□ 0.72
LIME1-208ENST00000493265 TDP2O95551 362 aa19.54■□□□□ 0.72
LIME1-208ENST00000493265 PRAMEF19Q5SWL8 479 aa19.54■□□□□ 0.72
LIME1-208ENST00000493265 MYSM1Q5VVJ2 828 aa19.54■□□□□ 0.72
LIME1-208ENST00000493265 SEPT14Q6ZU15 432 aa19.54■□□□□ 0.72
LIME1-208ENST00000493265 CYP2W1Q8TAV3 490 aa19.54■□□□□ 0.72
LIME1-208ENST00000493265 DEFB118Q96PH6 123 aa19.54■□□□□ 0.72
LIME1-208ENST00000493265 CIZ1Q9ULV3 898 aaPredicted RBP19.54■□□□□ 0.72
LIME1-208ENST00000493265 NR2E3Q9Y5X4 410 aa19.54■□□□□ 0.72
LIME1-208ENST00000493265 ALPK3Q96L96 1907 aa19.54■□□□□ 0.72
LIME1-208ENST00000493265 SNAI1O95863 264 aaPredicted RBP19.53■□□□□ 0.72
LIME1-208ENST00000493265 TFRCP02786 760 aaKnown RBP19.53■□□□□ 0.72
LIME1-208ENST00000493265 EDNRBP24530 442 aa19.53■□□□□ 0.72
LIME1-208ENST00000493265 MCM7P33993 719 aa19.53■□□□□ 0.72
LIME1-208ENST00000493265 TOB1P50616 345 aaPredicted RBP19.53■□□□□ 0.72
LIME1-208ENST00000493265 USP11P51784 963 aa19.53■□□□□ 0.72
LIME1-208ENST00000493265 CEBPZQ03701 1054 aaKnown RBP19.53■□□□□ 0.72
LIME1-208ENST00000493265 TRIM32Q13049 653 aa19.53■□□□□ 0.72
LIME1-208ENST00000493265 IRF5Q13568 498 aa19.53■□□□□ 0.72
LIME1-208ENST00000493265 ZNF174Q15697 407 aa19.53■□□□□ 0.72
LIME1-208ENST00000493265 TTC38Q5R3I4 469 aa19.53■□□□□ 0.72
LIME1-208ENST00000493265 MFSD14CQ5VZR4 134 aa19.53■□□□□ 0.72
LIME1-208ENST00000493265 OLFML2BQ68BL8 750 aa19.53■□□□□ 0.72
LIME1-208ENST00000493265 MAMDC4Q6UXC1 1216 aa19.53■□□□□ 0.72
LIME1-208ENST00000493265 PXYLP1Q8TE99 480 aa19.53■□□□□ 0.72
LIME1-208ENST00000493265 CRYGNQ8WXF5 182 aa19.53■□□□□ 0.72
LIME1-208ENST00000493265 PKD2L1Q9P0L9 805 aa19.53■□□□□ 0.72
LIME1-208ENST00000493265 ZHX1Q9UKY1 873 aaPredicted RBP19.53■□□□□ 0.72
LIME1-208ENST00000493265 CNPY2Q9Y2B0 182 aa19.53■□□□□ 0.72
LIME1-208ENST00000493265 SYNGAP1Q96PV0 1343 aa19.52■□□□□ 0.72
LIME1-208ENST00000493265 FAM86B1E9PN63 330 aa19.52■□□□□ 0.72
LIME1-208ENST00000493265 EDIL3O43854 480 aa19.52■□□□□ 0.72
LIME1-208ENST00000493265 EIF3JO75822 258 aaKnown RBP19.52■□□□□ 0.72
LIME1-208ENST00000493265 CYP3A4P08684 503 aa19.52■□□□□ 0.72
LIME1-208ENST00000493265 FAM86B2P0C5J1 330 aa19.52■□□□□ 0.72
LIME1-208ENST00000493265 PRR16Q569H4 304 aa19.52■□□□□ 0.72
LIME1-208ENST00000493265 XRRA1Q6P2D8 792 aa19.52■□□□□ 0.72
LIME1-208ENST00000493265 PLA2G4DQ86XP0 818 aa19.52■□□□□ 0.72
LIME1-208ENST00000493265 CHAMP1Q96JM3 812 aa19.52■□□□□ 0.72
LIME1-208ENST00000493265 MXRA8Q9BRK3 442 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms