RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 HIPK3Q9H422 1215 aa13.3□□□□□ -0.28
LRTM1-202ENST00000493075 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
LRTM1-202ENST00000493075 CSF2RAP15509 400 aa13.29□□□□□ -0.28
LRTM1-202ENST00000493075 CASTP20810 708 aaKnown RBP13.29□□□□□ -0.28
LRTM1-202ENST00000493075 HOXA13P31271 388 aaPredicted RBP13.29□□□□□ -0.28
LRTM1-202ENST00000493075 CYP2C18P33260 490 aa13.29□□□□□ -0.28
LRTM1-202ENST00000493075 LAMC2Q13753 1193 aa13.29□□□□□ -0.28
LRTM1-202ENST00000493075 PGM5Q15124 567 aa13.29□□□□□ -0.28
LRTM1-202ENST00000493075 NBPF20Q3BBV1 942 aa13.29□□□□□ -0.28
LRTM1-202ENST00000493075 TMEM240Q5SV17 173 aa13.29□□□□□ -0.28
LRTM1-202ENST00000493075 RASIP1Q5U651 963 aa13.29□□□□□ -0.28
LRTM1-202ENST00000493075 PSRC1Q6PGN9 363 aaPredicted RBP13.29□□□□□ -0.28
LRTM1-202ENST00000493075 AFG1LQ8WV93 481 aa13.29□□□□□ -0.28
LRTM1-202ENST00000493075 CCDC136Q96JN2 1154 aa13.29□□□□□ -0.28
LRTM1-202ENST00000493075 NEK1Q96PY6 1258 aa13.29□□□□□ -0.28
LRTM1-202ENST00000493075 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.29□□□□□ -0.28
LRTM1-202ENST00000493075 IL23AQ9NPF7 189 aa13.29□□□□□ -0.28
LRTM1-202ENST00000493075 STXBP5LQ9Y2K9 1186 aa13.29□□□□□ -0.28
LRTM1-202ENST00000493075 SLC12A7Q9Y666 1083 aa13.29□□□□□ -0.28
LRTM1-202ENST00000493075 MRVI1Q9Y6F6 885 aa13.29□□□□□ -0.28
LRTM1-202ENST00000493075 MCM3APO60318 1980 aa13.29□□□□□ -0.28
LRTM1-202ENST00000493075 LRRC37A2A6NM11 1700 aa13.29□□□□□ -0.28
LRTM1-202ENST00000493075 LTBP2Q14767 1821 aa13.28□□□□□ -0.28
LRTM1-202ENST00000493075 LCTP09848 1927 aa13.28□□□□□ -0.28
LRTM1-202ENST00000493075 TMEM265A0A087WTH1 108 aa13.28□□□□□ -0.28
LRTM1-202ENST00000493075 STAM2O75886 525 aa13.28□□□□□ -0.28
LRTM1-202ENST00000493075 RGS20O76081 388 aa13.28□□□□□ -0.28
LRTM1-202ENST00000493075 MMP3P08254 477 aa13.28□□□□□ -0.28
LRTM1-202ENST00000493075 MYCLP12524 364 aaPredicted RBP13.28□□□□□ -0.28
LRTM1-202ENST00000493075 CCND2P30279 289 aa13.28□□□□□ -0.28
LRTM1-202ENST00000493075 EXOSC10Q01780 885 aaKnown RBP13.28□□□□□ -0.28
LRTM1-202ENST00000493075 ZNF697Q5TEC3 545 aa13.28□□□□□ -0.28
LRTM1-202ENST00000493075 RPUSD2Q8IZ73 545 aaKnown RBP13.28□□□□□ -0.28
LRTM1-202ENST00000493075 SRBD1Q8N5C6 995 aaKnown RBP13.28□□□□□ -0.28
LRTM1-202ENST00000493075 FANCBQ8NB91 859 aa13.28□□□□□ -0.28
LRTM1-202ENST00000493075 MYL10Q9BUA6 226 aa13.28□□□□□ -0.28
LRTM1-202ENST00000493075 SEC63Q9UGP8 760 aaKnown RBP13.28□□□□□ -0.28
LRTM1-202ENST00000493075 PIK3CDO00329 1044 aa13.27□□□□□ -0.29
LRTM1-202ENST00000493075 PPFIA4O75335 1185 aa13.27□□□□□ -0.29
LRTM1-202ENST00000493075 FGBP02675 491 aa13.27□□□□□ -0.29
LRTM1-202ENST00000493075 COL9A3Q14050 684 aaPredicted RBP13.27□□□□□ -0.29
LRTM1-202ENST00000493075 KRT32Q14532 448 aa13.27□□□□□ -0.29
LRTM1-202ENST00000493075 DGKDQ16760 1214 aa13.27□□□□□ -0.29
LRTM1-202ENST00000493075 SYNE3Q6ZMZ3 975 aa13.27□□□□□ -0.29
LRTM1-202ENST00000493075 ZNF365Q70YC5 407 aa13.27□□□□□ -0.29
LRTM1-202ENST00000493075 DHX32Q7L7V1 743 aaKnown RBP13.27□□□□□ -0.29
LRTM1-202ENST00000493075 SESTD1Q86VW0 696 aa13.27□□□□□ -0.29
LRTM1-202ENST00000493075 FCHSD1Q86WN1 690 aa13.27□□□□□ -0.29
LRTM1-202ENST00000493075 DHX37Q8IY37 1157 aaKnown RBP13.27□□□□□ -0.29
LRTM1-202ENST00000493075 PPTC7Q8NI37 304 aa13.27□□□□□ -0.29
LRTM1-202ENST00000493075 HERVK_113Q902F9 699 aa13.27□□□□□ -0.29
LRTM1-202ENST00000493075 CUL5Q93034 780 aa13.27□□□□□ -0.29
LRTM1-202ENST00000493075 SEMA6BQ9H3T3 888 aa13.27□□□□□ -0.29
LRTM1-202ENST00000493075 TRMT13Q9NUP7 481 aaKnown RBP13.27□□□□□ -0.29
LRTM1-202ENST00000493075 FRMPD4Q14CM0 1322 aa13.27□□□□□ -0.29
LRTM1-202ENST00000493075 PLEKHA8P1O95397 391 aa13.26□□□□□ -0.29
LRTM1-202ENST00000493075 HMGB1P09429 215 aaKnown RBP13.26□□□□□ -0.29
LRTM1-202ENST00000493075 HOXD8P13378 290 aaPredicted RBP13.26□□□□□ -0.29
LRTM1-202ENST00000493075 ICAM3P32942 547 aa13.26□□□□□ -0.29
LRTM1-202ENST00000493075 CELF3Q5SZQ8 465 aaKnown RBP13.26□□□□□ -0.29
LRTM1-202ENST00000493075 MYSM1Q5VVJ2 828 aa13.26□□□□□ -0.29
LRTM1-202ENST00000493075 XRRA1Q6P2D8 792 aa13.26□□□□□ -0.29
LRTM1-202ENST00000493075 TEX2Q8IWB9 1127 aa13.26□□□□□ -0.29
LRTM1-202ENST00000493075 RASEFQ8IZ41 740 aa13.26□□□□□ -0.29
LRTM1-202ENST00000493075 PIBF1Q8WXW3 757 aa13.26□□□□□ -0.29
LRTM1-202ENST00000493075 KAT2BQ92831 832 aa13.26□□□□□ -0.29
LRTM1-202ENST00000493075 KCNB2Q92953 911 aa13.26□□□□□ -0.29
LRTM1-202ENST00000493075 WNT8AQ9H1J5 351 aa13.26□□□□□ -0.29
LRTM1-202ENST00000493075 MTIF3Q9H2K0 278 aaKnown RBP13.26□□□□□ -0.29
LRTM1-202ENST00000493075 UMODL1Q5DID0 1318 aa13.26□□□□□ -0.29
LRTM1-202ENST00000493075 PITPNM1O00562 1244 aa13.25□□□□□ -0.29
LRTM1-202ENST00000493075 MEIS2O14770 477 aa13.25□□□□□ -0.29
LRTM1-202ENST00000493075 PFKMP08237 780 aa13.25□□□□□ -0.29
LRTM1-202ENST00000493075 ACRP10323 421 aa13.25□□□□□ -0.29
LRTM1-202ENST00000493075 CYP2C9P11712 490 aa13.25□□□□□ -0.29
LRTM1-202ENST00000493075 CCL23P55773 120 aa13.25□□□□□ -0.29
LRTM1-202ENST00000493075 GNPTABQ3T906 1256 aa13.25□□□□□ -0.29
LRTM1-202ENST00000493075 FAM47CQ5HY64 1035 aa13.25□□□□□ -0.29
LRTM1-202ENST00000493075 TMTC3Q6ZXV5 915 aa13.25□□□□□ -0.29
LRTM1-202ENST00000493075 IL31RAQ8NI17 732 aa13.25□□□□□ -0.29
LRTM1-202ENST00000493075 SMARCC2Q8TAQ2 1214 aa13.25□□□□□ -0.29
LRTM1-202ENST00000493075 GUCD1Q96NT3 240 aa13.25□□□□□ -0.29
LRTM1-202ENST00000493075 INPP4AQ96PE3 977 aaPredicted RBP13.25□□□□□ -0.29
LRTM1-202ENST00000493075 KATNAL1Q9BW62 490 aa13.25□□□□□ -0.29
LRTM1-202ENST00000493075 LRRC2Q9BYS8 371 aa13.25□□□□□ -0.29
LRTM1-202ENST00000493075 RBM28Q9NW13 759 aaKnown RBP13.25□□□□□ -0.29
LRTM1-202ENST00000493075 SPATA31C2B4DYI2 1134 aa13.24□□□□□ -0.29
LRTM1-202ENST00000493075 HAS3O00219 553 aa13.24□□□□□ -0.29
LRTM1-202ENST00000493075 RXRAP19793 462 aa13.24□□□□□ -0.29
LRTM1-202ENST00000493075 RFC2P35250 354 aa13.24□□□□□ -0.29
LRTM1-202ENST00000493075 RCAN1P53805 252 aa13.24□□□□□ -0.29
LRTM1-202ENST00000493075 MRPS9P82933 396 aaKnown RBP13.24□□□□□ -0.29
LRTM1-202ENST00000493075 SP2Q02086 613 aa13.24□□□□□ -0.29
LRTM1-202ENST00000493075 BFSP2Q13515 415 aa13.24□□□□□ -0.29
LRTM1-202ENST00000493075 PCNX4Q63HM2 1172 aa13.24□□□□□ -0.29
LRTM1-202ENST00000493075 APOA5Q6Q788 366 aa13.24□□□□□ -0.29
LRTM1-202ENST00000493075 USP17L6PQ6QN14 398 aa13.24□□□□□ -0.29
LRTM1-202ENST00000493075 CMTR1Q8N1G2 835 aaKnown RBP13.24□□□□□ -0.29
LRTM1-202ENST00000493075 RETREG2Q8NC44 543 aa13.24□□□□□ -0.29
LRTM1-202ENST00000493075 SPATA33Q96N06 139 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms