RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 NCOR1O75376 2440 aa11.52□□□□□ -0.56
TNFRSF9-203ENST00000492571 XIRP2A4UGR9 3374 aa11.52□□□□□ -0.56
TNFRSF9-203ENST00000492571 TSPY2A6NKD2 308 aa11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 NKRFO15226 690 aaKnown RBP eCLIP11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 BAIAP3O94812 1187 aa11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 IQCF3P0C7M6 154 aa11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 KCNC4Q03721 635 aa11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 PTPN11Q06124 597 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 NFRKBQ6P4R8 1299 aa11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 HERC6Q8IVU3 1022 aa11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 IFNL3Q8IZI9 196 aa11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 TTC13Q8NBP0 860 aa11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 OR6J1Q8NGC5 347 aa11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 OSBP2Q969R2 916 aa11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 CHMP4CQ96CF2 233 aa11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 CRBNQ96SW2 442 aa11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 ZBTB40Q9NUA8 1239 aa11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 LMCD1Q9NZU5 365 aa11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 PLXNA1Q9UIW2 1896 aa11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 MYO9BQ13459 2157 aa11.52□□□□□ -0.57
TNFRSF9-203ENST00000492571 PTPDC1A2A3K4 754 aa11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 GPR37L1O60883 481 aa11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 PARNO95453 639 aaKnown RBP11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 ICAM1P05362 532 aa11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 CHMP4BP1P59074 171 aa11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 PURAQ00577 322 aaKnown RBP11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 TAP1Q03518 808 aa11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 PDE4DQ08499 809 aa11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 BAATQ14032 418 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 PPP2R5BQ15173 497 aa11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 CCDC96Q2M329 555 aa11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 NBPF20Q3BBV1 942 aa11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 KCTD1Q719H9 257 aa11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 SIRT2Q8IXJ6 389 aa11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 PRR12Q9ULL5 1215 aa11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 MTMR7Q9Y216 660 aa11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 ZNF536O15090 1300 aa11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 COL11A1P12107 1806 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF9-203ENST00000492571 GRB10Q13322 594 aa11.5□□□□□ -0.57
TNFRSF9-203ENST00000492571 MUM1L1Q5H9M0 696 aa11.5□□□□□ -0.57
TNFRSF9-203ENST00000492571 PADI6Q6TGC4 694 aa11.5□□□□□ -0.57
TNFRSF9-203ENST00000492571 MORC4Q8TE76 937 aa11.5□□□□□ -0.57
TNFRSF9-203ENST00000492571 SCFD2Q8WU76 684 aa11.5□□□□□ -0.57
TNFRSF9-203ENST00000492571 MYH8P13535 1937 aa11.49□□□□□ -0.57
TNFRSF9-203ENST00000492571 PTGS1P23219 599 aa11.49□□□□□ -0.57
TNFRSF9-203ENST00000492571 CALML3P27482 149 aa11.49□□□□□ -0.57
TNFRSF9-203ENST00000492571 ALDH5A1P51649 535 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF9-203ENST00000492571 SNAP25P60880 206 aa11.49□□□□□ -0.57
TNFRSF9-203ENST00000492571 PPARAQ07869 468 aa11.49□□□□□ -0.57
TNFRSF9-203ENST00000492571 CSPP1Q1MSJ5 1256 aa11.49□□□□□ -0.57
TNFRSF9-203ENST00000492571 CAGE1Q8TC20 777 aa11.49□□□□□ -0.57
TNFRSF9-203ENST00000492571 EPB41L4AQ9HCS5 686 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF9-203ENST00000492571 CHD7Q9P2D1 2997 aa11.49□□□□□ -0.57
TNFRSF9-203ENST00000492571 PI4K2BG5E9Z4 385 aa11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 SMARCA5O60264 1052 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 RANBP6O60518 1105 aaKnown RBP11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 EFCAB14O75071 495 aa11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 TXNP10599 105 aaKnown RBP11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 ALADP13716 330 aa11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 SSTR3P32745 418 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 PTGISQ16647 500 aa11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 TMEM63BQ5T3F8 832 aa11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 KRT40Q6A162 431 aa11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 RNF207Q6ZRF8 634 aa11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 AFAP1L1Q8TED9 768 aa11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 DCAF4Q8WV16 495 aa11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 UIMC1Q96RL1 719 aa11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 CTNNA3Q9UI47 895 aa11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 DDX49Q9Y6V7 483 aaKnown RBP11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 PLIN4Q96Q06 1357 aa11.48□□□□□ -0.57
TNFRSF9-203ENST00000492571 BAZ2AQ9UIF9 1905 aaKnown RBP11.47□□□□□ -0.57
TNFRSF9-203ENST00000492571 PARP14Q460N5 1801 aa11.47□□□□□ -0.57
TNFRSF9-203ENST00000492571 RBM47A0AV96 593 aaKnown RBP11.47□□□□□ -0.57
TNFRSF9-203ENST00000492571 EPOPA6NHQ4 379 aa11.47□□□□□ -0.57
TNFRSF9-203ENST00000492571 A6NJR5 290 aa11.47□□□□□ -0.57
TNFRSF9-203ENST00000492571 PRR33A8MZF0 331 aa11.47□□□□□ -0.57
TNFRSF9-203ENST00000492571 IKBKEQ14164 716 aa11.47□□□□□ -0.57
TNFRSF9-203ENST00000492571 GJD3Q8N144 294 aa11.47□□□□□ -0.57
TNFRSF9-203ENST00000492571 DNERQ8NFT8 737 aa11.47□□□□□ -0.57
TNFRSF9-203ENST00000492571 VWCEQ96DN2 955 aa11.47□□□□□ -0.57
TNFRSF9-203ENST00000492571 PURBQ96QR8 312 aaKnown RBP11.47□□□□□ -0.57
TNFRSF9-203ENST00000492571 TGS1Q96RS0 853 aaKnown RBP11.47□□□□□ -0.57
TNFRSF9-203ENST00000492571 RAD9AQ99638 391 aa11.47□□□□□ -0.57
TNFRSF9-203ENST00000492571 RANBP17Q9H2T7 1088 aaKnown RBP11.47□□□□□ -0.57
TNFRSF9-203ENST00000492571 TOMM22Q9NS69 142 aa11.47□□□□□ -0.57
TNFRSF9-203ENST00000492571 FAM50BQ9Y247 325 aa11.47□□□□□ -0.57
TNFRSF9-203ENST00000492571 ABHD14A-ACY1A0A1B0GW23 586 aa11.46□□□□□ -0.57
TNFRSF9-203ENST00000492571 FAM86C2PA6NEL3 165 aa11.46□□□□□ -0.57
TNFRSF9-203ENST00000492571 M0R2C6 588 aa11.46□□□□□ -0.57
TNFRSF9-203ENST00000492571 SELPP16109 830 aa11.46□□□□□ -0.57
TNFRSF9-203ENST00000492571 CASTP20810 708 aaKnown RBP11.46□□□□□ -0.57
TNFRSF9-203ENST00000492571 SLC16A2P36021 539 aa11.46□□□□□ -0.57
TNFRSF9-203ENST00000492571 PUS10Q3MIT2 529 aaKnown RBP11.46□□□□□ -0.57
TNFRSF9-203ENST00000492571 SYDE2Q5VT97 1194 aa11.46□□□□□ -0.57
TNFRSF9-203ENST00000492571 CNKSR3Q6P9H4 555 aa11.46□□□□□ -0.57
TNFRSF9-203ENST00000492571 C7orf31Q8N865 590 aa11.46□□□□□ -0.57
TNFRSF9-203ENST00000492571 FSD1Q9BTV5 496 aa11.46□□□□□ -0.57
TNFRSF9-203ENST00000492571 MTUS1Q9ULD2 1270 aa11.46□□□□□ -0.57
TNFRSF9-203ENST00000492571 NFIBO00712 420 aa11.45□□□□□ -0.58
TNFRSF9-203ENST00000492571 TOP1P11387 765 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms