RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 SAMM50Q9Y512 469 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 USP17L5A8MUK1 530 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 ENC1O14682 589 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 TBC1D8O95759 1140 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 KRT13P13646 458 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 VAV2P52735 878 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 C16orf86Q6ZW13 317 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 LARP4BQ92615 738 aaKnown RBP11.88□□□□□ -0.51
SNED1-211ENST00000491761 C7orf25Q9BPX7 421 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 MYH2Q9UKX2 1941 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 TMEM110-MUSTN1A8MSY1 372 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 SRGNP10124 158 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 GJC1P36383 396 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 VPS72Q15906 364 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 NHEJ1Q9H9Q4 299 aaPredicted RBP11.88□□□□□ -0.51
SNED1-211ENST00000491761 FAM207AQ9NSI2 230 aaPredicted RBP11.88□□□□□ -0.51
SNED1-211ENST00000491761 CHD4Q14839 1912 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 CYTH3O43739 400 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 BBOX1O75936 387 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 NAA25Q14CX7 972 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 ANKRD40Q6AI12 368 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 NCAPH2Q6IBW4 605 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 DPP8Q6V1X1 898 aaPredicted RBP11.88□□□□□ -0.51
SNED1-211ENST00000491761 CCDC121Q6ZUS5 278 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 SND1Q7KZF4 910 aaKnown RBP eCLIP11.88□□□□□ -0.51
SNED1-211ENST00000491761 COA7Q96BR5 231 aa11.88□□□□□ -0.51
SNED1-211ENST00000491761 LIG3P49916 1009 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 C2CD5Q86YS7 1000 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 AFAP1L1Q8TED9 768 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 NAP1L4Q99733 375 aaKnown RBP11.87□□□□□ -0.51
SNED1-211ENST00000491761 ABCB6Q9NP58 842 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 GPR75-ASB3A0A0A6YYF3 556 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 A0A0U1RQJ8 604 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 SMARCA1P28370 1054 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 NAALADL2Q58DX5 795 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 TTI2Q6NXR4 508 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 PDE11AQ9HCR9 933 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 ARAP2Q8WZ64 1704 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 GOLGA6CA6NDK9 693 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 TRAF5O00463 557 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 FANCGO15287 622 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 SERPINB2P05120 415 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 GOLGA6DP0CG33 693 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 CETN2P41208 172 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 PMS1P54277 932 aaKnown RBP11.87□□□□□ -0.51
SNED1-211ENST00000491761 STK4Q13043 487 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 GBP6Q6ZN66 633 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 POTEDQ86YR6 584 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 SYCP3Q8IZU3 236 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 FBF1Q8TES7 1133 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 DNAJC7Q99615 494 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 IFIH1Q9BYX4 1025 aaKnown RBP11.87□□□□□ -0.51
SNED1-211ENST00000491761 ZCCHC17Q9NP64 241 aaKnown RBP11.87□□□□□ -0.51
SNED1-211ENST00000491761 TMEM260Q9NX78 707 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 GOLGA6AQ9NYA3 693 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 HDAC9Q9UKV0 1011 aa11.87□□□□□ -0.51
SNED1-211ENST00000491761 FLT1P17948 1338 aa11.86□□□□□ -0.51
SNED1-211ENST00000491761 FCER1AP12319 257 aa11.86□□□□□ -0.51
SNED1-211ENST00000491761 ATP1A2P50993 1020 aa11.86□□□□□ -0.51
SNED1-211ENST00000491761 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
SNED1-211ENST00000491761 UNC13DQ70J99 1090 aa11.86□□□□□ -0.51
SNED1-211ENST00000491761 ANKRD13CQ8N6S4 541 aa11.86□□□□□ -0.51
SNED1-211ENST00000491761 BEGAINQ9BUH8 593 aa11.86□□□□□ -0.51
SNED1-211ENST00000491761 RTFDC1Q9BY42 306 aaPredicted RBP11.86□□□□□ -0.51
SNED1-211ENST00000491761 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.86□□□□□ -0.51
SNED1-211ENST00000491761 ADAMTS3O15072 1205 aa11.86□□□□□ -0.51
SNED1-211ENST00000491761 OPA1O60313 960 aa11.86□□□□□ -0.51
SNED1-211ENST00000491761 RAD51AP2Q09MP3 1159 aa11.86□□□□□ -0.51
SNED1-211ENST00000491761 CCDC65Q8IXS2 484 aa11.86□□□□□ -0.51
SNED1-211ENST00000491761 PVALEFA0A1B0GWK0 134 aa11.86□□□□□ -0.51
SNED1-211ENST00000491761 MAN2A1Q16706 1144 aa11.86□□□□□ -0.51
SNED1-211ENST00000491761 RRAGAQ7L523 313 aa11.86□□□□□ -0.51
SNED1-211ENST00000491761 TRIM58Q8NG06 486 aa11.86□□□□□ -0.51
SNED1-211ENST00000491761 UBLCP1Q8WVY7 318 aaPredicted RBP11.86□□□□□ -0.51
SNED1-211ENST00000491761 FUT8Q9BYC5 575 aa11.86□□□□□ -0.51
SNED1-211ENST00000491761 FAM53CQ9NYF3 392 aa11.86□□□□□ -0.51
SNED1-211ENST00000491761 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
SNED1-211ENST00000491761 MAGEA1P43355 309 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 CETN1Q12798 172 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 MYOCDQ8IZQ8 938 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 NDST4Q9H3R1 872 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 USP40Q9NVE5 1235 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 BAZ2AQ9UIF9 1905 aaKnown RBP11.85□□□□□ -0.51
SNED1-211ENST00000491761 DOCK2Q92608 1830 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 EIF3CLB5ME19 914 aaKnown RBP11.85□□□□□ -0.51
SNED1-211ENST00000491761 KLRC4O43908 158 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 POTEJP0CG39 1038 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 TM4SF1P30408 202 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 INPP5BP32019 993 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 CYP27A1Q02318 531 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 GRIK5Q16478 980 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 VWA3BQ502W6 1294 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 PNMA8AQ86V59 439 aaPredicted RBP11.85□□□□□ -0.51
SNED1-211ENST00000491761 HNRNPLLQ8WVV9 542 aaKnown RBP11.85□□□□□ -0.51
SNED1-211ENST00000491761 MRRFQ96E11 262 aaKnown RBP11.85□□□□□ -0.51
SNED1-211ENST00000491761 EIF3CQ99613 913 aaKnown RBP11.85□□□□□ -0.51
SNED1-211ENST00000491761 GLT8D2Q9H1C3 349 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 TRIM10Q9UDY6 481 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 DDX25Q9UHL0 483 aaKnown RBP11.85□□□□□ -0.51
SNED1-211ENST00000491761 MYH6P13533 1939 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms