RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 ZFP91Q96JP5 570 aaPredicted RBP14.7□□□□□ -0.06
SEC61A1-206ENST00000491668 RNPC3Q96LT9 517 aaKnown RBP14.7□□□□□ -0.06
SEC61A1-206ENST00000491668 MTG1Q9BT17 334 aaPredicted RBP14.7□□□□□ -0.06
SEC61A1-206ENST00000491668 SPZ1Q9BXG8 430 aa14.7□□□□□ -0.06
SEC61A1-206ENST00000491668 TLR3O15455 904 aaKnown RBP14.69□□□□□ -0.06
SEC61A1-206ENST00000491668 ACRP10323 421 aa14.69□□□□□ -0.06
SEC61A1-206ENST00000491668 LIFRP42702 1097 aa14.69□□□□□ -0.06
SEC61A1-206ENST00000491668 SMAD3P84022 425 aaKnown RBP14.69□□□□□ -0.06
SEC61A1-206ENST00000491668 NBPF20Q3BBV1 942 aa14.69□□□□□ -0.06
SEC61A1-206ENST00000491668 KAT2BQ92831 832 aa14.69□□□□□ -0.06
SEC61A1-206ENST00000491668 GPKOWQ92917 476 aaPredicted RBP eCLIP14.69□□□□□ -0.063e-10■■■■□ 24.6
SEC61A1-206ENST00000491668 TMEM87BQ96K49 555 aa14.69□□□□□ -0.06
SEC61A1-206ENST00000491668 CTAGE1Q96RT6 745 aa14.69□□□□□ -0.06
SEC61A1-206ENST00000491668 SEZ6LQ9BYH1 1024 aa14.69□□□□□ -0.06
SEC61A1-206ENST00000491668 TTYH1Q9H313 450 aaPredicted RBP14.69□□□□□ -0.06
SEC61A1-206ENST00000491668 HIPK3Q9H422 1215 aa14.69□□□□□ -0.06
SEC61A1-206ENST00000491668 MAP3K20Q9NYL2 800 aaKnown RBP14.69□□□□□ -0.06
SEC61A1-206ENST00000491668 GCOM1H8Y6P7 765 aaPredicted RBP14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 GH1P01241 217 aa14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 MMP3P08254 477 aa14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 POLR2MP0CAP2 368 aa14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 CYP2C9P11712 490 aa14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 MYCLP12524 364 aaPredicted RBP14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 SMARCA1P28370 1054 aa14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 EXOSC10Q01780 885 aaKnown RBP14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 SP2Q02086 613 aa14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 PGM5Q15124 567 aa14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 ADCK5Q3MIX3 580 aa14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 C8orf34Q49A92 452 aa14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 RNF20Q5VTR2 975 aa14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 ZNF365Q70YC5 407 aa14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 FCHSD1Q86WN1 690 aa14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 EMID1Q96A84 441 aaPredicted RBP14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 FAM161BQ96MY7 647 aa14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 BCAS3Q9H6U6 928 aa14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 UPF2Q9HAU5 1272 aaKnown RBP14.68□□□□□ -0.06
SEC61A1-206ENST00000491668 FRMPD4Q14CM0 1322 aa14.67□□□□□ -0.06
SEC61A1-206ENST00000491668 RBAK-RBAKDNI3L0D1 243 aa14.67□□□□□ -0.06
SEC61A1-206ENST00000491668 KPNA6O60684 536 aa14.67□□□□□ -0.06
SEC61A1-206ENST00000491668 CCL23P55773 120 aa14.67□□□□□ -0.06
SEC61A1-206ENST00000491668 MRPS9P82933 396 aaKnown RBP14.67□□□□□ -0.06
SEC61A1-206ENST00000491668 PPIGQ13427 754 aaKnown RBP eCLIP14.67□□□□□ -0.06
SEC61A1-206ENST00000491668 TSGA10IPQ3SY00 556 aa14.67□□□□□ -0.06
SEC61A1-206ENST00000491668 NFRKBQ6P4R8 1299 aa14.67□□□□□ -0.06
SEC61A1-206ENST00000491668 SGMS1Q86VZ5 419 aa14.67□□□□□ -0.06
SEC61A1-206ENST00000491668 TMEM199Q8N511 208 aa14.67□□□□□ -0.06
SEC61A1-206ENST00000491668 SAMD3Q8N6K7 520 aa14.67□□□□□ -0.06
SEC61A1-206ENST00000491668 CTCFLQ8NI51 663 aaPredicted RBP14.67□□□□□ -0.06
SEC61A1-206ENST00000491668 TCEANC2Q96MN5 208 aa14.67□□□□□ -0.06
SEC61A1-206ENST00000491668 IL23AQ9NPF7 189 aa14.67□□□□□ -0.06
SEC61A1-206ENST00000491668 STXBP5LQ9Y2K9 1186 aa14.67□□□□□ -0.06
SEC61A1-206ENST00000491668 hCG_1642624A0A1W2PR95 340 aa14.66□□□□□ -0.06
SEC61A1-206ENST00000491668 CCDC69A6NI79 296 aa14.66□□□□□ -0.06
SEC61A1-206ENST00000491668 MEIS2O14770 477 aa14.66□□□□□ -0.06
SEC61A1-206ENST00000491668 HOXD8P13378 290 aaPredicted RBP14.66□□□□□ -0.06
SEC61A1-206ENST00000491668 KIF5BP33176 963 aa14.66□□□□□ -0.06
SEC61A1-206ENST00000491668 BRDTQ58F21 947 aaPredicted RBP14.66□□□□□ -0.06
SEC61A1-206ENST00000491668 USP17L6PQ6QN14 398 aa14.66□□□□□ -0.06
SEC61A1-206ENST00000491668 NFXL1Q6ZNB6 911 aa14.66□□□□□ -0.06
SEC61A1-206ENST00000491668 TMTC2Q8N394 836 aa14.66□□□□□ -0.06
SEC61A1-206ENST00000491668 SEMA6BQ9H3T3 888 aa14.66□□□□□ -0.06
SEC61A1-206ENST00000491668 CXXC1Q9P0U4 656 aaPredicted RBP14.66□□□□□ -0.06
SEC61A1-206ENST00000491668 BRPF3Q9ULD4 1205 aa14.66□□□□□ -0.06
SEC61A1-206ENST00000491668 MRVI1Q9Y6F6 885 aa14.66□□□□□ -0.06
SEC61A1-206ENST00000491668 MYH7BA7E2Y1 1941 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 TRANK1O15050 2925 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 GRXCR1A8MXD5 290 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 SORBS3O60504 671 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 FUT2Q10981 343 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 TRAF1Q13077 416 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 SEMA3FQ13275 785 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 FAM47CQ5HY64 1035 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 MYSM1Q5VVJ2 828 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 TMTC3Q6ZXV5 915 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 FANCBQ8NB91 859 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 KCNB2Q92953 911 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 RRP36Q96EU6 259 aaKnown RBP14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 SCLYQ96I15 445 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 NEK1Q96PY6 1258 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 LZTS2Q9BRK4 669 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 TELO2Q9Y4R8 837 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 SLC12A7Q9Y666 1083 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 CUL9Q8IWT3 2517 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 SCN5AQ14524 2016 aa14.65□□□□□ -0.06
SEC61A1-206ENST00000491668 PIK3CDO00329 1044 aa14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 EPB41L2O43491 1005 aaKnown RBP14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 UBA1P22314 1058 aaKnown RBP14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 CCND2P30279 289 aa14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 PBX2P40425 430 aa14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 PTPN11Q06124 597 aaPredicted RBP14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 LAMC2Q13753 1193 aa14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 HSDL1Q3SXM5 330 aa14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 CELF3Q5SZQ8 465 aaKnown RBP14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 ZNF697Q5TEC3 545 aa14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 GDF6Q6KF10 455 aaPredicted RBP14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 PSRC1Q6PGN9 363 aaPredicted RBP14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 APOA5Q6Q788 366 aa14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 DHX32Q7L7V1 743 aaKnown RBP14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 SESTD1Q86VW0 696 aa14.64□□□□□ -0.07
SEC61A1-206ENST00000491668 MICU3Q86XE3 530 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 173.2 ms