RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 GJB4Q9NTQ9 266 aa15.38■□□□□ 0.05
NUP188-208ENST00000491502 TFIP11Q9UBB9 837 aaKnown RBP15.38■□□□□ 0.05
NUP188-208ENST00000491502 NR2E3Q9Y5X4 410 aa15.38■□□□□ 0.05
NUP188-208ENST00000491502 PLXNA1Q9UIW2 1896 aa15.37■□□□□ 0.05
NUP188-208ENST00000491502 CCDC194A0A1B0GVG4 234 aa15.37■□□□□ 0.05
NUP188-208ENST00000491502 SMCO2A6NFE2 343 aa15.37■□□□□ 0.05
NUP188-208ENST00000491502 POTEB2H3BUK9 544 aa15.37■□□□□ 0.05
NUP188-208ENST00000491502 NASPP49321 788 aaPredicted RBP15.37■□□□□ 0.05
NUP188-208ENST00000491502 PRAMEF19Q5SWL8 479 aa15.37■□□□□ 0.05
NUP188-208ENST00000491502 ANO1Q5XXA6 986 aa15.37■□□□□ 0.05
NUP188-208ENST00000491502 KRT25Q7Z3Z0 450 aa15.37■□□□□ 0.05
NUP188-208ENST00000491502 GPKOWQ92917 476 aaPredicted RBP eCLIP15.37■□□□□ 0.052e-10■■■■□ 19.5
NUP188-208ENST00000491502 AMNQ9BXJ7 453 aa15.37■□□□□ 0.05
NUP188-208ENST00000491502 C11orf49Q9H6J7 331 aa15.37■□□□□ 0.05
NUP188-208ENST00000491502 ASB14A6NK59 587 aa15.36■□□□□ 0.05
NUP188-208ENST00000491502 KIF28PB7ZC32 967 aa15.36■□□□□ 0.05
NUP188-208ENST00000491502 MNX1P50219 401 aaPredicted RBP15.36■□□□□ 0.05
NUP188-208ENST00000491502 ADCY7P51828 1080 aa15.36■□□□□ 0.05
NUP188-208ENST00000491502 CDC37Q16543 378 aaPredicted RBP15.36■□□□□ 0.05
NUP188-208ENST00000491502 FAM173BQ6P4H8 233 aa15.36■□□□□ 0.05
NUP188-208ENST00000491502 DIS3LQ8TF46 1054 aaKnown RBP15.36■□□□□ 0.05
NUP188-208ENST00000491502 CUL5Q93034 780 aa15.36■□□□□ 0.05
NUP188-208ENST00000491502 USP28Q96RU2 1077 aa15.36■□□□□ 0.05
NUP188-208ENST00000491502 MAF1Q9H063 256 aa15.36■□□□□ 0.05
NUP188-208ENST00000491502 A1CFQ9NQ94 594 aaKnown RBP15.36■□□□□ 0.05
NUP188-208ENST00000491502 SPTLC2O15270 562 aa15.35■□□□□ 0.05
NUP188-208ENST00000491502 ME1P48163 572 aa15.35■□□□□ 0.05
NUP188-208ENST00000491502 SLC35G1Q2M3R5 365 aa15.35■□□□□ 0.05
NUP188-208ENST00000491502 MUM1L1Q5H9M0 696 aa15.35■□□□□ 0.05
NUP188-208ENST00000491502 FBXO11Q86XK2 927 aa15.35■□□□□ 0.05
NUP188-208ENST00000491502 REXO1Q8N1G1 1221 aaKnown RBP15.35■□□□□ 0.05
NUP188-208ENST00000491502 FAM133AQ8N9E0 248 aa15.35■□□□□ 0.05
NUP188-208ENST00000491502 CPVLQ9H3G5 476 aa15.35■□□□□ 0.05
NUP188-208ENST00000491502 ABHD16BQ9H3Z7 469 aa15.35■□□□□ 0.05
NUP188-208ENST00000491502 GDPD2Q9HCC8 539 aa15.35■□□□□ 0.05
NUP188-208ENST00000491502 FAM184BQ9ULE4 1060 aa15.35■□□□□ 0.05
NUP188-208ENST00000491502 PCDHA1Q9Y5I3 950 aa15.35■□□□□ 0.05
NUP188-208ENST00000491502 MKI67P46013 3256 aaKnown RBP15.34■□□□□ 0.05
NUP188-208ENST00000491502 DNM1LO00429 736 aa15.34■□□□□ 0.05
NUP188-208ENST00000491502 EVI5O60447 810 aa15.34■□□□□ 0.05
NUP188-208ENST00000491502 PPP6R2O75170 966 aa15.34■□□□□ 0.05
NUP188-208ENST00000491502 SNAI1O95863 264 aaPredicted RBP15.34■□□□□ 0.05
NUP188-208ENST00000491502 ZNF865P0CJ78 1059 aaPredicted RBP15.34■□□□□ 0.05
NUP188-208ENST00000491502 RARBP10826 455 aa15.34■□□□□ 0.05
NUP188-208ENST00000491502 COL6A1P12109 1028 aa15.34■□□□□ 0.05
NUP188-208ENST00000491502 AKR1A1P14550 325 aa15.34■□□□□ 0.05
NUP188-208ENST00000491502 CNTN2Q02246 1040 aa15.34■□□□□ 0.05
NUP188-208ENST00000491502 CEBPZQ03701 1054 aaKnown RBP15.34■□□□□ 0.05
NUP188-208ENST00000491502 NR5A1Q13285 461 aa15.34■□□□□ 0.05
NUP188-208ENST00000491502 SLC39A14Q15043 492 aa15.34■□□□□ 0.05
NUP188-208ENST00000491502 QRICH1Q2TAL8 776 aa15.34■□□□□ 0.05
NUP188-208ENST00000491502 NSMFQ6X4W1 530 aa15.34■□□□□ 0.05
NUP188-208ENST00000491502 LINC00301Q8NCQ3 95 aa15.34■□□□□ 0.05
NUP188-208ENST00000491502 NAP1L4Q99733 375 aaKnown RBP15.34■□□□□ 0.05
NUP188-208ENST00000491502 RIC8AQ9NPQ8 531 aa15.34■□□□□ 0.05
NUP188-208ENST00000491502 CYP39A1Q9NYL5 469 aa15.34■□□□□ 0.05
NUP188-208ENST00000491502 ADD3Q9UEY8 706 aaKnown RBP15.34■□□□□ 0.05
NUP188-208ENST00000491502 MORC2Q9Y6X9 1032 aaPredicted RBP15.34■□□□□ 0.05
NUP188-208ENST00000491502 LOC102724159A0A0B4J2E5 919 aa15.33■□□□□ 0.04
NUP188-208ENST00000491502 KBTBD13C9JR72 458 aa15.33■□□□□ 0.04
NUP188-208ENST00000491502 LETM1O95202 739 aaPredicted RBP15.33■□□□□ 0.04
NUP188-208ENST00000491502 ORC2Q13416 577 aaPredicted RBP15.33■□□□□ 0.04
NUP188-208ENST00000491502 ACVR2BQ13705 512 aa15.33■□□□□ 0.04
NUP188-208ENST00000491502 NONOQ15233 471 aaKnown RBP eCLIP15.33■□□□□ 0.04
NUP188-208ENST00000491502 PWP2Q15269 919 aaKnown RBP15.33■□□□□ 0.04
NUP188-208ENST00000491502 ARMCX2Q7L311 632 aa15.33■□□□□ 0.04
NUP188-208ENST00000491502 OXER1Q8TDS5 423 aa15.33■□□□□ 0.04
NUP188-208ENST00000491502 FGD4Q96M96 766 aa15.33■□□□□ 0.04
NUP188-208ENST00000491502 PSTPIP2Q9H939 334 aa15.33■□□□□ 0.04
NUP188-208ENST00000491502 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.33■□□□□ 0.04
NUP188-208ENST00000491502 SMCHD1A6NHR9 2005 aa15.33■□□□□ 0.04
NUP188-208ENST00000491502 A0A1W2PQ27 194 aa15.32■□□□□ 0.04
NUP188-208ENST00000491502 A0A1W2PQ64 194 aa15.32■□□□□ 0.04
NUP188-208ENST00000491502 A0A1W2PQD8 194 aa15.32■□□□□ 0.04
NUP188-208ENST00000491502 SOWAHBA6NEL2 793 aa15.32■□□□□ 0.04
NUP188-208ENST00000491502 TAL1P17542 331 aaPredicted RBP15.32■□□□□ 0.04
NUP188-208ENST00000491502 BAATQ14032 418 aaPredicted RBP15.32■□□□□ 0.04
NUP188-208ENST00000491502 ADALQ6DHV7 355 aa15.32■□□□□ 0.04
NUP188-208ENST00000491502 CCDC73Q6ZRK6 1079 aa15.32■□□□□ 0.04
NUP188-208ENST00000491502 PIK3AP1Q6ZUJ8 805 aa15.32■□□□□ 0.04
NUP188-208ENST00000491502 TNFRSF25Q93038 417 aa15.32■□□□□ 0.04
NUP188-208ENST00000491502 CHAMP1Q96JM3 812 aa15.32■□□□□ 0.04
NUP188-208ENST00000491502 XPNPEP3Q9NQH7 507 aa15.32■□□□□ 0.04
NUP188-208ENST00000491502 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.32■□□□□ 0.04
NUP188-208ENST00000491502 ZHX1Q9UKY1 873 aaPredicted RBP15.32■□□□□ 0.04
NUP188-208ENST00000491502 PCDHA6Q9UN73 950 aa15.32■□□□□ 0.04
NUP188-208ENST00000491502 MRPL11Q9Y3B7 192 aaKnown RBP15.32■□□□□ 0.04
NUP188-208ENST00000491502 PCDHA8Q9Y5H6 950 aa15.32■□□□□ 0.04
NUP188-208ENST00000491502 CLIC4Q9Y696 253 aa15.32■□□□□ 0.04
NUP188-208ENST00000491502 ABCB11O95342 1321 aa15.32■□□□□ 0.04
NUP188-208ENST00000491502 B4DLN1 442 aa15.31■□□□□ 0.04
NUP188-208ENST00000491502 H0YGN5 161 aa15.31■□□□□ 0.04
NUP188-208ENST00000491502 FOSP01100 380 aaPredicted RBP15.31■□□□□ 0.04
NUP188-208ENST00000491502 LRRC41Q15345 812 aa15.31■□□□□ 0.04
NUP188-208ENST00000491502 NPY5RQ15761 445 aa15.31■□□□□ 0.04
NUP188-208ENST00000491502 TTC38Q5R3I4 469 aa15.31■□□□□ 0.04
NUP188-208ENST00000491502 GJC2Q5T442 439 aaPredicted RBP15.31■□□□□ 0.04
NUP188-208ENST00000491502 RNF207Q6ZRF8 634 aa15.31■□□□□ 0.04
NUP188-208ENST00000491502 RNF180Q86T96 592 aa15.31■□□□□ 0.04
NUP188-208ENST00000491502 MCF2L2Q86YR7 1114 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms