RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 GPKOWQ92917 476 aaPredicted RBP eCLIP13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 NAP1L4Q99733 375 aaKnown RBP13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 TRIM34Q9BYJ4 488 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 CCSER1Q9C0I3 900 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 CUEDC2Q9H467 287 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 MAGEF1Q9HAY2 307 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 SPTLC3Q9NUV7 552 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 CSADQ9Y600 493 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 MYH7BA7E2Y1 1941 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 VWA3AA6NCI4 1184 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 USP17L5A8MUK1 530 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 BIN1O00499 593 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 BMP1P13497 986 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 HOXA7P31268 230 aaPredicted RBP13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 MCM7P33993 719 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 RBM5P52756 815 aaKnown RBP eCLIP13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 NOLC1Q14978 699 aaKnown RBP eCLIP13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 NCAPHQ15003 741 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 DLGAP5Q15398 846 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 CERKLQ49MI3 558 aaPredicted RBP13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 SPECC1Q5M775 1068 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 CCDC186Q7Z3E2 898 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 KIAA0825Q8IV33 1275 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 SPC24Q8NBT2 197 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 KIAA1524Q8TCG1 905 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 ERCC4Q92889 916 aaPredicted RBP13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 PAGE5Q96GU1 130 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 VEZTQ9HBM0 779 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 RMND1Q9NWS8 449 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 PRKAG2Q9UGJ0 569 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 MAN1B1Q9UKM7 699 aa13.48□□□□□ -0.25
SRGAP3-210ENST00000491467 NRDCO43847 1150 aa13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 GOLGA8HP0CJ92 632 aa13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 MAP3K9P80192 1104 aa13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 TRAF1Q13077 416 aa13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 SNAPC2Q13487 334 aa13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 VGLL4Q14135 290 aa13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 FKBP1CQ5VVH2 108 aa13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 TMEM179Q6ZVK1 233 aa13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 NEK8Q86SG6 692 aa13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 DHX58Q96C10 678 aa13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 MTMR8Q96EF0 704 aa13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 ZBED3Q96IU2 234 aaPredicted RBP13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 EPSTI1Q96J88 318 aa13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 PIGSQ96S52 555 aa13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 TTC12Q9H892 705 aaPredicted RBP13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 TMOD2Q9NZR1 351 aa13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 FAM198AQ9UFP1 575 aa13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 HERC5Q9UII4 1024 aaKnown RBP13.47□□□□□ -0.25
SRGAP3-210ENST00000491467 CLRN2A0PK11 232 aa13.46□□□□□ -0.25
SRGAP3-210ENST00000491467 GTPBP6O43824 516 aaPredicted RBP13.46□□□□□ -0.25
SRGAP3-210ENST00000491467 ADCY7P51828 1080 aa13.46□□□□□ -0.25
SRGAP3-210ENST00000491467 MRPL12P52815 198 aaKnown RBP13.46□□□□□ -0.25
SRGAP3-210ENST00000491467 FANCCQ00597 558 aa13.46□□□□□ -0.25
SRGAP3-210ENST00000491467 DPYDQ12882 1025 aa13.46□□□□□ -0.25
SRGAP3-210ENST00000491467 E2F4Q16254 413 aa13.46□□□□□ -0.25
SRGAP3-210ENST00000491467 TYW1BQ6NUM6 668 aa13.46□□□□□ -0.25
SRGAP3-210ENST00000491467 REXO1Q8N1G1 1221 aaKnown RBP13.46□□□□□ -0.25
SRGAP3-210ENST00000491467 PDILTQ8N807 584 aa13.46□□□□□ -0.25
SRGAP3-210ENST00000491467 MTMR14Q8NCE2 650 aa13.46□□□□□ -0.25
SRGAP3-210ENST00000491467 UIMC1Q96RL1 719 aa13.46□□□□□ -0.25
SRGAP3-210ENST00000491467 TSPYL2Q9H2G4 693 aaPredicted RBP13.46□□□□□ -0.25
SRGAP3-210ENST00000491467 HMX1Q9NP08 348 aaPredicted RBP13.46□□□□□ -0.25
SRGAP3-210ENST00000491467 RIC8AQ9NPQ8 531 aa13.46□□□□□ -0.25
SRGAP3-210ENST00000491467 PDHXO00330 501 aa13.45□□□□□ -0.26
SRGAP3-210ENST00000491467 MPHOSPH10O00566 681 aaKnown RBP13.45□□□□□ -0.26
SRGAP3-210ENST00000491467 SLC26A4O43511 780 aa13.45□□□□□ -0.26
SRGAP3-210ENST00000491467 PTGS1P23219 599 aa13.45□□□□□ -0.26
SRGAP3-210ENST00000491467 NFIAQ12857 509 aa13.45□□□□□ -0.26
SRGAP3-210ENST00000491467 IRF5Q13568 498 aa13.45□□□□□ -0.26
SRGAP3-210ENST00000491467 INF2Q27J81 1249 aa13.45□□□□□ -0.26
SRGAP3-210ENST00000491467 CFAP100Q494V2 611 aa13.45□□□□□ -0.26
SRGAP3-210ENST00000491467 USP49Q70CQ1 688 aa13.45□□□□□ -0.26
SRGAP3-210ENST00000491467 LRRC8AQ8IWT6 810 aa13.45□□□□□ -0.26
SRGAP3-210ENST00000491467 ZSCAN29Q8IWY8 852 aaPredicted RBP13.45□□□□□ -0.26
SRGAP3-210ENST00000491467 CCDC150Q8NCX0 1101 aa13.45□□□□□ -0.26
SRGAP3-210ENST00000491467 GMCL1P1Q8NEA9 526 aa13.45□□□□□ -0.26
SRGAP3-210ENST00000491467 VAT1LQ9HCJ6 419 aa13.45□□□□□ -0.26
SRGAP3-210ENST00000491467 MTMR7Q9Y216 660 aa13.45□□□□□ -0.26
SRGAP3-210ENST00000491467 CACNA1GO43497 2377 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 WDFY4Q6ZS81 3184 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 WNT7AO00755 349 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 ZBTB5O15062 677 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 OR52Z1P0C646 297 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 GCFC2P16383 781 aaKnown RBP13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 UBA7P41226 1012 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 PPP1R2P41236 205 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 KCNJ6P48051 423 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 UBASH3AP57075 661 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 PDIA5Q14554 519 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 RASA3Q14644 834 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 PDXDC2PQ6P474 469 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 ADGRF4Q8IZF3 695 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 ZNF830Q96NB3 372 aaPredicted RBP13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 RAB34Q9BZG1 259 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 UBA5Q9GZZ9 404 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 KCNF1Q9H3M0 494 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 ZNF576Q9H609 170 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 JMJD4Q9H9V9 463 aa13.44□□□□□ -0.26
SRGAP3-210ENST00000491467 KCND1Q9NSA2 647 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms