RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 WDR11Q9BZH6 1224 aa13.07□□□□□ -0.32
NCSTN-214ENST00000491390 UPF3BQ9BZI7 483 aaKnown RBP13.07□□□□□ -0.32
NCSTN-214ENST00000491390 CPVLQ9H3G5 476 aa13.07□□□□□ -0.32
NCSTN-214ENST00000491390 VTA1Q9NP79 307 aa13.07□□□□□ -0.32
NCSTN-214ENST00000491390 MTUS1Q9ULD2 1270 aa13.07□□□□□ -0.32
NCSTN-214ENST00000491390 SALL3Q9BXA9 1300 aa13.07□□□□□ -0.32
NCSTN-214ENST00000491390 FAM186AA6NE01 2351 aa13.07□□□□□ -0.32
NCSTN-214ENST00000491390 FRYLO94915 3013 aa13.07□□□□□ -0.32
NCSTN-214ENST00000491390 KCNJ6P48051 423 aa13.06□□□□□ -0.32
NCSTN-214ENST00000491390 CHMP4BP1P59074 171 aa13.06□□□□□ -0.32
NCSTN-214ENST00000491390 PKN1Q16512 942 aa13.06□□□□□ -0.32
NCSTN-214ENST00000491390 DUSP28Q4G0W2 176 aa13.06□□□□□ -0.32
NCSTN-214ENST00000491390 FAM47CQ5HY64 1035 aa13.06□□□□□ -0.32
NCSTN-214ENST00000491390 ZNF589Q86UQ0 364 aaPredicted RBP13.06□□□□□ -0.32
NCSTN-214ENST00000491390 OR6J1Q8NGC5 347 aa13.06□□□□□ -0.32
NCSTN-214ENST00000491390 MORC4Q8TE76 937 aa13.06□□□□□ -0.32
NCSTN-214ENST00000491390 DCAF4Q8WV16 495 aa13.06□□□□□ -0.32
NCSTN-214ENST00000491390 CLEC4DQ8WXI8 215 aa13.06□□□□□ -0.32
NCSTN-214ENST00000491390 EDAQ92838 391 aa13.06□□□□□ -0.32
NCSTN-214ENST00000491390 PABPC5Q96DU9 382 aaKnown RBP13.06□□□□□ -0.32
NCSTN-214ENST00000491390 MRPL38Q96DV4 380 aaKnown RBP13.06□□□□□ -0.32
NCSTN-214ENST00000491390 MUTYHQ9UIF7 546 aa13.06□□□□□ -0.32
NCSTN-214ENST00000491390 ORC4O43929 436 aa13.05□□□□□ -0.32
NCSTN-214ENST00000491390 FGAP02671 866 aa13.05□□□□□ -0.32
NCSTN-214ENST00000491390 NOVP48745 357 aa13.05□□□□□ -0.32
NCSTN-214ENST00000491390 ERMP1Q7Z2K6 904 aa13.05□□□□□ -0.32
NCSTN-214ENST00000491390 CTAGE1Q96RT6 745 aa13.05□□□□□ -0.32
NCSTN-214ENST00000491390 FTOQ9C0B1 505 aaKnown RBP eCLIP13.05□□□□□ -0.32
NCSTN-214ENST00000491390 POLR3EQ9NVU0 708 aa13.05□□□□□ -0.32
NCSTN-214ENST00000491390 ANAPC4Q9UJX5 808 aa13.05□□□□□ -0.32
NCSTN-214ENST00000491390 FAM50BQ9Y247 325 aa13.05□□□□□ -0.32
NCSTN-214ENST00000491390 COL4A6Q14031 1691 aa13.05□□□□□ -0.32
NCSTN-214ENST00000491390 PLXNA3P51805 1871 aa13.04□□□□□ -0.32
NCSTN-214ENST00000491390 PROB1E7EW31 1015 aa13.04□□□□□ -0.32
NCSTN-214ENST00000491390 CXCL10P02778 98 aa13.04□□□□□ -0.32
NCSTN-214ENST00000491390 GOLGA8HP0CJ92 632 aa13.04□□□□□ -0.32
NCSTN-214ENST00000491390 PDHBP11177 359 aa13.04□□□□□ -0.32
NCSTN-214ENST00000491390 TOP1P11387 765 aaKnown RBP13.04□□□□□ -0.32
NCSTN-214ENST00000491390 LTBRP36941 435 aa13.04□□□□□ -0.32
NCSTN-214ENST00000491390 NMIQ13287 307 aaPredicted RBP13.04□□□□□ -0.32
NCSTN-214ENST00000491390 SMAD2Q15796 467 aaKnown RBP13.04□□□□□ -0.32
NCSTN-214ENST00000491390 TCTN1Q2MV58 587 aa13.04□□□□□ -0.32
NCSTN-214ENST00000491390 NBPF20Q3BBV1 942 aa13.04□□□□□ -0.32
NCSTN-214ENST00000491390 USH1GQ495M9 461 aa13.04□□□□□ -0.32
NCSTN-214ENST00000491390 PPP4R3BQ5MIZ7 849 aa13.04□□□□□ -0.32
NCSTN-214ENST00000491390 NFRKBQ6P4R8 1299 aa13.04□□□□□ -0.32
NCSTN-214ENST00000491390 BTNL9Q6UXG8 535 aa13.04□□□□□ -0.32
NCSTN-214ENST00000491390 TBC1D10CQ8IV04 446 aa13.04□□□□□ -0.32
NCSTN-214ENST00000491390 CRBNQ96SW2 442 aa13.04□□□□□ -0.32
NCSTN-214ENST00000491390 ZKSCAN3Q9BRR0 538 aa13.04□□□□□ -0.32
NCSTN-214ENST00000491390 ADD3Q9UEY8 706 aaKnown RBP13.04□□□□□ -0.32
NCSTN-214ENST00000491390 ARIH2O95376 493 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 FGRP09769 529 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 PDE1AP54750 535 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 RPS6P62753 249 aaKnown RBP13.03□□□□□ -0.32
NCSTN-214ENST00000491390 PTPN11Q06124 597 aaPredicted RBP13.03□□□□□ -0.32
NCSTN-214ENST00000491390 PDE4DQ08499 809 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 RBL2Q08999 1139 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 MKRN4PQ13434 485 aaPredicted RBP13.03□□□□□ -0.32
NCSTN-214ENST00000491390 BFSP2Q13515 415 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 TIGD5Q53EQ6 642 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 RNF207Q6ZRF8 634 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 TRIM67Q6ZTA4 783 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 RNF135Q8IUD6 432 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 RETREG2Q8NC44 543 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 FBXO22Q8NEZ5 403 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 SP7Q8TDD2 431 aaPredicted RBP13.03□□□□□ -0.32
NCSTN-214ENST00000491390 TBC1D5Q92609 795 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 EVI5LQ96CN4 794 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 C17orf80Q9BSJ5 609 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 MTG1Q9BT17 334 aaPredicted RBP13.03□□□□□ -0.32
NCSTN-214ENST00000491390 ZBED2Q9BTP6 218 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 UBA5Q9GZZ9 404 aa13.03□□□□□ -0.32
NCSTN-214ENST00000491390 TRIP12Q14669 1992 aaPredicted RBP13.03□□□□□ -0.32
NCSTN-214ENST00000491390 RBM47A0AV96 593 aaKnown RBP13.02□□□□□ -0.33
NCSTN-214ENST00000491390 TMEM221A6NGB7 291 aa13.02□□□□□ -0.33
NCSTN-214ENST00000491390 M0R296 226 aa13.02□□□□□ -0.33
NCSTN-214ENST00000491390 HSPD1P10809 573 aaKnown RBP13.02□□□□□ -0.33
NCSTN-214ENST00000491390 CPT1AP50416 773 aa13.02□□□□□ -0.33
NCSTN-214ENST00000491390 ZNF543Q08ER8 600 aa13.02□□□□□ -0.33
NCSTN-214ENST00000491390 PPP2R5BQ15173 497 aa13.02□□□□□ -0.33
NCSTN-214ENST00000491390 ALX1Q15699 326 aa13.02□□□□□ -0.33
NCSTN-214ENST00000491390 CTC1Q2NKJ3 1217 aa13.02□□□□□ -0.33
NCSTN-214ENST00000491390 MCMDC2Q4G0Z9 681 aa13.02□□□□□ -0.33
NCSTN-214ENST00000491390 CNKSR3Q6P9H4 555 aa13.02□□□□□ -0.33
NCSTN-214ENST00000491390 AFAP1L1Q8TED9 768 aa13.02□□□□□ -0.33
NCSTN-214ENST00000491390 POP1Q99575 1024 aaKnown RBP13.02□□□□□ -0.33
NCSTN-214ENST00000491390 GPHNQ9NQX3 736 aaPredicted RBP13.02□□□□□ -0.33
NCSTN-214ENST00000491390 HELLSQ9NRZ9 838 aa13.02□□□□□ -0.33
NCSTN-214ENST00000491390 FAM86C1Q9NVL1 165 aa13.02□□□□□ -0.33
NCSTN-214ENST00000491390 CTNNA3Q9UI47 895 aa13.02□□□□□ -0.33
NCSTN-214ENST00000491390 NEDD4P46934 1319 aa13.02□□□□□ -0.33
NCSTN-214ENST00000491390 ABHD14A-ACY1A0A1B0GW23 586 aa13.01□□□□□ -0.33
NCSTN-214ENST00000491390 HTRA4P83105 476 aaPredicted RBP13.01□□□□□ -0.33
NCSTN-214ENST00000491390 TCEAL5Q5H9L2 206 aa13.01□□□□□ -0.33
NCSTN-214ENST00000491390 FBXL6Q8N531 539 aa13.01□□□□□ -0.33
NCSTN-214ENST00000491390 BANK1Q8NDB2 785 aa13.01□□□□□ -0.33
NCSTN-214ENST00000491390 CAGE1Q8TC20 777 aa13.01□□□□□ -0.33
NCSTN-214ENST00000491390 ZBTB47Q9UFB7 747 aaPredicted RBP13.01□□□□□ -0.33
NCSTN-214ENST00000491390 TRIM6-TRIM34B2RNG4 842 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms