RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 ARIH1Q9Y4X5 557 aaPredicted RBP9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 PTPRSQ13332 1948 aa9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 ABHD14A-ACY1A0A1B0GW23 586 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 TRIM6-TRIM34B2RNG4 842 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 HAS3O00219 553 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 RFXAPO00287 272 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 TLL1O43897 1013 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 EFCAB14O75071 495 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 EIF3JO75822 258 aaKnown RBP9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 CASTP20810 708 aaKnown RBP9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 WDR5P61964 334 aaKnown RBP9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 TFF2Q03403 129 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 STXBP2Q15833 593 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 CDC37Q16543 378 aaPredicted RBP9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 ASPRV1Q53RT3 343 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 GDF6Q6KF10 455 aaPredicted RBP9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 SAMD3Q8N6K7 520 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 PNMA1Q8ND90 353 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 TBC1D5Q92609 795 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 DHX38Q92620 1227 aaKnown RBP9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 RILPL2Q969X0 211 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 TAAR1Q96RJ0 339 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 FTOQ9C0B1 505 aaKnown RBP eCLIP9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 UBA5Q9GZZ9 404 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 MAP3K20Q9NYL2 800 aaKnown RBP9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 COL20A1Q9P218 1284 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 GTF2IRD1Q9UHL9 959 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 DDX41Q9UJV9 622 aaKnown RBP9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 NOD1Q9Y239 953 aa9.88□□□□□ -0.83
APOBEC3F-204ENST00000491387 NEDD4P46934 1319 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 ZNF213O14771 459 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 F2P00734 622 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 GOLGA8HP0CJ92 632 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 SDSP20132 328 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 KCNJ6P48051 423 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 HSD17B4P51659 736 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 KCNQ1P51787 676 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 NUCB1Q02818 461 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 GRB10Q13322 594 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 LAMC2Q13753 1193 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 DGKDQ16760 1214 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 LY6KQ17RY6 165 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 TRIM71Q2Q1W2 868 aaKnown RBP9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 QRICH1Q2TAL8 776 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 USH1GQ495M9 461 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 CNKSR3Q6P9H4 555 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 TRAF7Q6Q0C0 670 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 LRRC8DQ7L1W4 858 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 CHD1LQ86WJ1 897 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 IQCA1Q86XH1 822 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 ADGRF4Q8IZF3 695 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 PPTC7Q8NI37 304 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 MTMR8Q96EF0 704 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 RMDN3Q96TC7 470 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 KATNAL1Q9BW62 490 aa9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 MRPL11Q9Y3B7 192 aaKnown RBP9.87□□□□□ -0.83
APOBEC3F-204ENST00000491387 XIRP2A4UGR9 3374 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 WDR81Q562E7 1941 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 RBAK-RBAKDNI3L0D1 243 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 OPLAHO14841 1288 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 NBNO60934 754 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 KDM4AO75164 1064 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 PPFIA4O75335 1185 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 GJB5O95377 273 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 NR3C2P08235 984 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 CKBP12277 381 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 GSPT1P15170 499 aaKnown RBP9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 PLA2G5P39877 138 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 ERVK-21P61565 698 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 PTK7Q13308 1070 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 MKRN4PQ13434 485 aaPredicted RBP9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 KCNV1Q6PIU1 500 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 SEPT14Q6ZU15 432 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 STOX1Q6ZVD7 989 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 FBXO11Q86XK2 927 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 ENAHQ8N8S7 591 aaPredicted RBP9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 PPP1R13LQ8WUF5 828 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 ARNTL2Q8WYA1 636 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 HLA-CQ95604 372 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 NECAB3Q96P71 396 aaPredicted RBP9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 ZSCAN10Q96SZ4 725 aaPredicted RBP9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 RAD9AQ99638 391 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 DSCC1Q9BVC3 393 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 CPVLQ9H3G5 476 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 KAT14Q9H8E8 782 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 JMJD4Q9H9V9 463 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 CERS4Q9HA82 394 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 PXMP2Q9NR77 195 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 HDAC6Q9UBN7 1215 aa9.86□□□□□ -0.83
APOBEC3F-204ENST00000491387 LCHNA4D1U4 455 aa9.85□□□□□ -0.83
APOBEC3F-204ENST00000491387 RGS20O76081 388 aa9.85□□□□□ -0.83
APOBEC3F-204ENST00000491387 PARP1P09874 1014 aaKnown RBP9.85□□□□□ -0.83
APOBEC3F-204ENST00000491387 TGFB3P10600 412 aa9.85□□□□□ -0.83
APOBEC3F-204ENST00000491387 HOXC8P31273 242 aa9.85□□□□□ -0.83
APOBEC3F-204ENST00000491387 PSEN2P49810 448 aa9.85□□□□□ -0.83
APOBEC3F-204ENST00000491387 SKIV2LQ15477 1246 aaKnown RBP9.85□□□□□ -0.83
APOBEC3F-204ENST00000491387 ARHGEF16Q5VV41 709 aa9.85□□□□□ -0.83
APOBEC3F-204ENST00000491387 MYSM1Q5VVJ2 828 aa9.85□□□□□ -0.83
APOBEC3F-204ENST00000491387 KRT40Q6A162 431 aa9.85□□□□□ -0.83
APOBEC3F-204ENST00000491387 VSIG10LQ86VR7 867 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms