RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 PPP1R12CQ9BZL4 782 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 RBM28Q9NW13 759 aaKnown RBP10.02□□□□□ -0.81
GABRE-211ENST00000491339 DOCK5Q9H7D0 1870 aa10.01□□□□□ -0.81
GABRE-211ENST00000491339 OPLAHO14841 1288 aa10.01□□□□□ -0.81
GABRE-211ENST00000491339 CYTH3O43739 400 aa10.01□□□□□ -0.81
GABRE-211ENST00000491339 SUPT20HL2P0C7V6 817 aa10.01□□□□□ -0.81
GABRE-211ENST00000491339 MYCLP12524 364 aaPredicted RBP10.01□□□□□ -0.81
GABRE-211ENST00000491339 HOXA13P31271 388 aaPredicted RBP10.01□□□□□ -0.81
GABRE-211ENST00000491339 GNPTABQ3T906 1256 aa10.01□□□□□ -0.81
GABRE-211ENST00000491339 FAM47CQ5HY64 1035 aa10.01□□□□□ -0.81
GABRE-211ENST00000491339 MFSD5Q6N075 450 aa10.01□□□□□ -0.81
GABRE-211ENST00000491339 PSRC1Q6PGN9 363 aaPredicted RBP10.01□□□□□ -0.81
GABRE-211ENST00000491339 SGMS1Q86VZ5 419 aa10.01□□□□□ -0.81
GABRE-211ENST00000491339 SLC43A3Q8NBI5 491 aa10.01□□□□□ -0.81
GABRE-211ENST00000491339 SMARCC2Q8TAQ2 1214 aa10.01□□□□□ -0.81
GABRE-211ENST00000491339 PDCD2LQ9BRP1 358 aa10.01□□□□□ -0.81
GABRE-211ENST00000491339 HIPK3Q9H422 1215 aa10.01□□□□□ -0.81
GABRE-211ENST00000491339 A6NJR5 290 aa10□□□□□ -0.81
GABRE-211ENST00000491339 RXRAP19793 462 aa10□□□□□ -0.81
GABRE-211ENST00000491339 PTGS1P23219 599 aa10□□□□□ -0.81
GABRE-211ENST00000491339 PSMC6P62333 389 aa10□□□□□ -0.81
GABRE-211ENST00000491339 PGM5Q15124 567 aa10□□□□□ -0.81
GABRE-211ENST00000491339 FCHSD1Q86WN1 690 aa10□□□□□ -0.81
GABRE-211ENST00000491339 COPS5Q92905 334 aa10□□□□□ -0.81
GABRE-211ENST00000491339 KATNAL1Q9BW62 490 aa10□□□□□ -0.81
GABRE-211ENST00000491339 LRRC2Q9BYS8 371 aa10□□□□□ -0.81
GABRE-211ENST00000491339 MTIF3Q9H2K0 278 aaKnown RBP10□□□□□ -0.81
GABRE-211ENST00000491339 NOD1Q9Y239 953 aa10□□□□□ -0.81
GABRE-211ENST00000491339 LAMA3Q16787 3333 aa10□□□□□ -0.81
GABRE-211ENST00000491339 B4GALT4O60513 344 aa10□□□□□ -0.81
GABRE-211ENST00000491339 STAM2O75886 525 aa10□□□□□ -0.81
GABRE-211ENST00000491339 ARIH2O95376 493 aa10□□□□□ -0.81
GABRE-211ENST00000491339 PLEKHA8P1O95397 391 aa10□□□□□ -0.81
GABRE-211ENST00000491339 CD4P01730 458 aa10□□□□□ -0.81
GABRE-211ENST00000491339 MMP3P08254 477 aa10□□□□□ -0.81
GABRE-211ENST00000491339 SHHQ15465 462 aa10□□□□□ -0.81
GABRE-211ENST00000491339 SLC35G1Q2M3R5 365 aa10□□□□□ -0.81
GABRE-211ENST00000491339 TMEM63BQ5T3F8 832 aa10□□□□□ -0.81
GABRE-211ENST00000491339 ZNF697Q5TEC3 545 aa10□□□□□ -0.81
GABRE-211ENST00000491339 TMTC3Q6ZXV5 915 aa10□□□□□ -0.81
GABRE-211ENST00000491339 DHX32Q7L7V1 743 aaKnown RBP10□□□□□ -0.81
GABRE-211ENST00000491339 ALDH8A1Q9H2A2 487 aaPredicted RBP10□□□□□ -0.81
GABRE-211ENST00000491339 EHMT1Q9H9B1 1298 aa10□□□□□ -0.81
GABRE-211ENST00000491339 FRMPD4Q14CM0 1322 aa9.99□□□□□ -0.81
GABRE-211ENST00000491339 ZBTB43O43298 467 aa9.99□□□□□ -0.81
GABRE-211ENST00000491339 CASTP20810 708 aaKnown RBP9.99□□□□□ -0.81
GABRE-211ENST00000491339 ITGB8P26012 769 aa9.99□□□□□ -0.81
GABRE-211ENST00000491339 PTPN11Q06124 597 aaPredicted RBP9.99□□□□□ -0.81
GABRE-211ENST00000491339 ARHGAP1Q07960 439 aa9.99□□□□□ -0.81
GABRE-211ENST00000491339 LAMC2Q13753 1193 aa9.99□□□□□ -0.81
GABRE-211ENST00000491339 DGKDQ16760 1214 aa9.99□□□□□ -0.81
GABRE-211ENST00000491339 RTN1Q16799 776 aa9.99□□□□□ -0.81
GABRE-211ENST00000491339 LY6KQ17RY6 165 aa9.99□□□□□ -0.81
GABRE-211ENST00000491339 TSGA10IPQ3SY00 556 aa9.99□□□□□ -0.81
GABRE-211ENST00000491339 C9orf50Q5SZB4 431 aa9.99□□□□□ -0.81
GABRE-211ENST00000491339 NFRKBQ6P4R8 1299 aa9.99□□□□□ -0.81
GABRE-211ENST00000491339 CCDC62Q6P9F0 684 aa9.99□□□□□ -0.81
GABRE-211ENST00000491339 APOA5Q6Q788 366 aa9.99□□□□□ -0.81
GABRE-211ENST00000491339 DHX37Q8IY37 1157 aaKnown RBP9.99□□□□□ -0.81
GABRE-211ENST00000491339 DEFB123Q8N688 67 aa9.99□□□□□ -0.81
GABRE-211ENST00000491339 CCDC155Q8N6L0 562 aa9.99□□□□□ -0.81
GABRE-211ENST00000491339 EMID1Q96A84 441 aaPredicted RBP9.99□□□□□ -0.81
GABRE-211ENST00000491339 NAP1L2Q9ULW6 460 aaPredicted RBP9.99□□□□□ -0.81
GABRE-211ENST00000491339 GBF1Q92538 1859 aa9.99□□□□□ -0.81
GABRE-211ENST00000491339 GOLGA8AA7E2F4 631 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 GOLGA8BA8MQT2 603 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 RCAN1P53805 252 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 CHMP4BP1P59074 171 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 RAB11FIP4Q86YS3 637 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 FANCBQ8NB91 859 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 PPTC7Q8NI37 304 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 AFG1LQ8WV93 481 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 CNTNAP5Q8WYK1 1306 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 KLF18A0A0U1RQI7 1052 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 hCG_1984214I3L0E3 225 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 PIK3CDO00329 1044 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 TGFB3P10600 412 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 SMAD3P84022 425 aaKnown RBP9.98□□□□□ -0.81
GABRE-211ENST00000491339 NBPF20Q3BBV1 942 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 PPP1R18Q6NYC8 613 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 BLOC1S2Q6QNY1 142 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 HEATR3Q7Z4Q2 680 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 SRBD1Q8N5C6 995 aaKnown RBP9.98□□□□□ -0.81
GABRE-211ENST00000491339 ZNF713Q8N859 430 aaPredicted RBP9.98□□□□□ -0.81
GABRE-211ENST00000491339 JAKMIP1Q96N16 626 aaKnown RBP9.98□□□□□ -0.81
GABRE-211ENST00000491339 TRPV6Q9H1D0 765 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 DDX41Q9UJV9 622 aaKnown RBP9.98□□□□□ -0.81
GABRE-211ENST00000491339 SCN5AQ14524 2016 aa9.98□□□□□ -0.81
GABRE-211ENST00000491339 GRIN2DO15399 1336 aa9.97□□□□□ -0.81
GABRE-211ENST00000491339 SZT2Q5T011 3432 aa9.97□□□□□ -0.81
GABRE-211ENST00000491339 SPDYE3A6NKU9 549 aa9.97□□□□□ -0.81
GABRE-211ENST00000491339 NOP56O00567 594 aaKnown RBP9.97□□□□□ -0.81
GABRE-211ENST00000491339 GGPS1O95749 300 aa9.97□□□□□ -0.81
GABRE-211ENST00000491339 PFKMP08237 780 aa9.97□□□□□ -0.81
GABRE-211ENST00000491339 CSF2RAP15509 400 aa9.97□□□□□ -0.81
GABRE-211ENST00000491339 UBA1P22314 1058 aaKnown RBP9.97□□□□□ -0.81
GABRE-211ENST00000491339 PSMA5P28066 241 aa9.97□□□□□ -0.81
GABRE-211ENST00000491339 CYP2C18P33260 490 aa9.97□□□□□ -0.81
GABRE-211ENST00000491339 BFSP2Q13515 415 aa9.97□□□□□ -0.81
GABRE-211ENST00000491339 XRRA1Q6P2D8 792 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms