RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 FAM217BQ9NTX9 383 aaPredicted RBP17.56■□□□□ 0.4
COL27A1-206ENST00000490831 DDX41Q9UJV9 622 aaKnown RBP17.56■□□□□ 0.4
COL27A1-206ENST00000490831 NID2Q14112 1375 aa17.55■□□□□ 0.4
COL27A1-206ENST00000490831 KLF18A0A0U1RQI7 1052 aa17.55■□□□□ 0.4
COL27A1-206ENST00000490831 MEIS2O14770 477 aa17.55■□□□□ 0.4
COL27A1-206ENST00000490831 KPNA6O60684 536 aa17.55■□□□□ 0.4
COL27A1-206ENST00000490831 CD4P01730 458 aa17.55■□□□□ 0.4
COL27A1-206ENST00000490831 CPA1P15085 419 aa17.55■□□□□ 0.4
COL27A1-206ENST00000490831 RPS6KB1P23443 525 aa17.55■□□□□ 0.4
COL27A1-206ENST00000490831 PSMA5P28066 241 aa17.55■□□□□ 0.4
COL27A1-206ENST00000490831 ARHGAP1Q07960 439 aa17.55■□□□□ 0.4
COL27A1-206ENST00000490831 RTN1Q16799 776 aa17.55■□□□□ 0.4
COL27A1-206ENST00000490831 LRIT3Q3SXY7 679 aa17.55■□□□□ 0.4
COL27A1-206ENST00000490831 BRDTQ58F21 947 aaPredicted RBP17.55■□□□□ 0.4
COL27A1-206ENST00000490831 IL31RAQ8NI17 732 aa17.55■□□□□ 0.4
COL27A1-206ENST00000490831 TMEM39AQ9NV64 488 aa17.55■□□□□ 0.4
COL27A1-206ENST00000490831 SCN10AQ9Y5Y9 1956 aa17.55■□□□□ 0.4
COL27A1-206ENST00000490831 GH1P01241 217 aa17.54■□□□□ 0.4
COL27A1-206ENST00000490831 CCND2P30279 289 aa17.54■□□□□ 0.4
COL27A1-206ENST00000490831 LY6KQ17RY6 165 aa17.54■□□□□ 0.4
COL27A1-206ENST00000490831 KCNV1Q6PIU1 500 aa17.54■□□□□ 0.4
COL27A1-206ENST00000490831 Q6ZUG5 572 aa17.54■□□□□ 0.4
COL27A1-206ENST00000490831 FCHSD1Q86WN1 690 aa17.54■□□□□ 0.4
COL27A1-206ENST00000490831 TEX2Q8IWB9 1127 aa17.54■□□□□ 0.4
COL27A1-206ENST00000490831 BADQ92934 168 aa17.54■□□□□ 0.4
COL27A1-206ENST00000490831 GOLGA8AA7E2F4 631 aa17.53■□□□□ 0.4
COL27A1-206ENST00000490831 GOLGA8BA8MQT2 603 aa17.53■□□□□ 0.4
COL27A1-206ENST00000490831 TLR3O15455 904 aaKnown RBP17.53■□□□□ 0.4
COL27A1-206ENST00000490831 STAM2O75886 525 aa17.53■□□□□ 0.4
COL27A1-206ENST00000490831 TGFB3P10600 412 aa17.53■□□□□ 0.4
COL27A1-206ENST00000490831 MYCLP12524 364 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-206ENST00000490831 RAG1P15918 1043 aa17.53■□□□□ 0.4
COL27A1-206ENST00000490831 CDC27P30260 824 aa17.53■□□□□ 0.4
COL27A1-206ENST00000490831 EVCP57679 992 aa17.53■□□□□ 0.4
COL27A1-206ENST00000490831 USP17L6PQ6QN14 398 aa17.53■□□□□ 0.4
COL27A1-206ENST00000490831 CCDC82Q8N4S0 544 aa17.53■□□□□ 0.4
COL27A1-206ENST00000490831 CUL5Q93034 780 aa17.53■□□□□ 0.4
COL27A1-206ENST00000490831 MTG1Q9BT17 334 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-206ENST00000490831 PSTPIP2Q9H939 334 aa17.53■□□□□ 0.4
COL27A1-206ENST00000490831 SZT2Q5T011 3432 aa17.53■□□□□ 0.4
COL27A1-206ENST00000490831 hCG_1642624A0A1W2PR95 340 aa17.52■□□□□ 0.4
COL27A1-206ENST00000490831 SOX1O00570 391 aaPredicted RBP17.52■□□□□ 0.4
COL27A1-206ENST00000490831 TIMP1P01033 207 aa17.52■□□□□ 0.4
COL27A1-206ENST00000490831 MYL3P08590 195 aa17.52■□□□□ 0.4
COL27A1-206ENST00000490831 CASTP20810 708 aaKnown RBP17.52■□□□□ 0.4
COL27A1-206ENST00000490831 PSMC6P62333 389 aa17.52■□□□□ 0.4
COL27A1-206ENST00000490831 MRPS9P82933 396 aaKnown RBP17.52■□□□□ 0.4
COL27A1-206ENST00000490831 FGD1P98174 961 aa17.52■□□□□ 0.4
COL27A1-206ENST00000490831 APOBRQ0VD83 1088 aa17.52■□□□□ 0.4
COL27A1-206ENST00000490831 XRRA1Q6P2D8 792 aa17.52■□□□□ 0.4
COL27A1-206ENST00000490831 SMARCC2Q8TAQ2 1214 aa17.52■□□□□ 0.4
COL27A1-206ENST00000490831 AFG1LQ8WV93 481 aa17.52■□□□□ 0.4
COL27A1-206ENST00000490831 BRF1Q92994 677 aa17.52■□□□□ 0.4
COL27A1-206ENST00000490831 INPP4AQ96PE3 977 aaPredicted RBP17.52■□□□□ 0.4
COL27A1-206ENST00000490831 TM6SF1Q9BZW5 370 aa17.52■□□□□ 0.4
COL27A1-206ENST00000490831 ZSWIM6Q9HCJ5 1215 aa17.52■□□□□ 0.4
COL27A1-206ENST00000490831 MRVI1Q9Y6F6 885 aa17.52■□□□□ 0.4
COL27A1-206ENST00000490831 CCDC196A0A1B0GTZ2 297 aa17.51■□□□□ 0.39
COL27A1-206ENST00000490831 hCG_1984214I3L0E3 225 aa17.51■□□□□ 0.39
COL27A1-206ENST00000490831 MMP3P08254 477 aa17.51■□□□□ 0.39
COL27A1-206ENST00000490831 HOXD8P13378 290 aaPredicted RBP17.51■□□□□ 0.39
COL27A1-206ENST00000490831 ICAM3P32942 547 aa17.51■□□□□ 0.39
COL27A1-206ENST00000490831 LAMC2Q13753 1193 aa17.51■□□□□ 0.39
COL27A1-206ENST00000490831 PCNX4Q63HM2 1172 aa17.51■□□□□ 0.39
COL27A1-206ENST00000490831 WWC2Q6AWC2 1192 aa17.51■□□□□ 0.39
COL27A1-206ENST00000490831 PPP1R18Q6NYC8 613 aa17.51■□□□□ 0.39
COL27A1-206ENST00000490831 RUFY3Q7L099 469 aa17.51■□□□□ 0.39
COL27A1-206ENST00000490831 ZNF713Q8N859 430 aaPredicted RBP17.51■□□□□ 0.39
COL27A1-206ENST00000490831 PPTC7Q8NI37 304 aa17.51■□□□□ 0.39
COL27A1-206ENST00000490831 ALDH8A1Q9H2A2 487 aaPredicted RBP17.51■□□□□ 0.39
COL27A1-206ENST00000490831 METAP2P50579 478 aaKnown RBP eCLIP17.5■□□□□ 0.39
COL27A1-206ENST00000490831 CELF3Q5SZQ8 465 aaKnown RBP17.5■□□□□ 0.39
COL27A1-206ENST00000490831 MYSM1Q5VVJ2 828 aa17.5■□□□□ 0.39
COL27A1-206ENST00000490831 MFSD5Q6N075 450 aa17.5■□□□□ 0.39
COL27A1-206ENST00000490831 GPR153Q6NV75 609 aa17.5■□□□□ 0.39
COL27A1-206ENST00000490831 NFRKBQ6P4R8 1299 aa17.5■□□□□ 0.39
COL27A1-206ENST00000490831 HEATR3Q7Z4Q2 680 aa17.5■□□□□ 0.39
COL27A1-206ENST00000490831 GPKOWQ92917 476 aaPredicted RBP eCLIP17.5■□□□□ 0.39
COL27A1-206ENST00000490831 V9GY48 417 aaPredicted RBP17.5■□□□□ 0.39
COL27A1-206ENST00000490831 SPATA31C2B4DYI2 1134 aa17.49■□□□□ 0.39
COL27A1-206ENST00000490831 B4GALT4O60513 344 aa17.49■□□□□ 0.39
COL27A1-206ENST00000490831 UBA1P22314 1058 aaKnown RBP17.49■□□□□ 0.39
COL27A1-206ENST00000490831 ADD1P35611 737 aaKnown RBP17.49■□□□□ 0.39
COL27A1-206ENST00000490831 SP2Q02086 613 aa17.49■□□□□ 0.39
COL27A1-206ENST00000490831 FPGSQ05932 587 aa17.49■□□□□ 0.39
COL27A1-206ENST00000490831 PTPN11Q06124 597 aaPredicted RBP17.49■□□□□ 0.39
COL27A1-206ENST00000490831 DGKDQ16760 1214 aa17.49■□□□□ 0.39
COL27A1-206ENST00000490831 NBPF20Q3BBV1 942 aa17.49■□□□□ 0.39
COL27A1-206ENST00000490831 GNPTABQ3T906 1256 aa17.49■□□□□ 0.39
COL27A1-206ENST00000490831 TYW1BQ6NUM6 668 aa17.49■□□□□ 0.39
COL27A1-206ENST00000490831 DHX37Q8IY37 1157 aaKnown RBP17.49■□□□□ 0.39
COL27A1-206ENST00000490831 BARHL2Q9NY43 387 aa17.49■□□□□ 0.39
COL27A1-206ENST00000490831 STXBP3O00186 592 aa17.48■□□□□ 0.39
COL27A1-206ENST00000490831 EPHB4P54760 987 aa17.48■□□□□ 0.39
COL27A1-206ENST00000490831 SEMA3FQ13275 785 aa17.48■□□□□ 0.39
COL27A1-206ENST00000490831 TOB2Q14106 344 aaPredicted RBP17.48■□□□□ 0.39
COL27A1-206ENST00000490831 SHHQ15465 462 aa17.48■□□□□ 0.39
COL27A1-206ENST00000490831 SESTD1Q86VW0 696 aa17.48■□□□□ 0.39
COL27A1-206ENST00000490831 KAT2BQ92831 832 aa17.48■□□□□ 0.39
COL27A1-206ENST00000490831 LRCH3Q96II8 777 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms