RNA–Protein interactions for RNA: ENST00000490812.5

PTPN18-215, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-215ENST00000490812 NOC4LQ9BVI4 516 aaKnown RBP24.63■■□□□ 1.53
PTPN18-215ENST00000490812 SEC63Q9UGP8 760 aaKnown RBP24.63■■□□□ 1.53
PTPN18-215ENST00000490812 DDX41Q9UJV9 622 aaKnown RBP24.63■■□□□ 1.53
PTPN18-215ENST00000490812 MRVI1Q9Y6F6 885 aa24.63■■□□□ 1.53
PTPN18-215ENST00000490812 MMP3P08254 477 aa24.62■■□□□ 1.53
PTPN18-215ENST00000490812 NBPF20Q3BBV1 942 aa24.62■■□□□ 1.53
PTPN18-215ENST00000490812 TSGA10IPQ3SY00 556 aa24.62■■□□□ 1.53
PTPN18-215ENST00000490812 ZNF697Q5TEC3 545 aa24.62■■□□□ 1.53
PTPN18-215ENST00000490812 SGMS1Q86VZ5 419 aa24.62■■□□□ 1.53
PTPN18-215ENST00000490812 AFG1LQ8WV93 481 aa24.62■■□□□ 1.53
PTPN18-215ENST00000490812 SLC12A7Q9Y666 1083 aa24.62■■□□□ 1.53
PTPN18-215ENST00000490812 MYCLP12524 364 aaPredicted RBP24.61■■□□□ 1.53
PTPN18-215ENST00000490812 CCND2P30279 289 aa24.61■■□□□ 1.53
PTPN18-215ENST00000490812 TMEM240Q5SV17 173 aa24.61■■□□□ 1.53
PTPN18-215ENST00000490812 C16orf59Q7L2K0 433 aa24.61■■□□□ 1.53
PTPN18-215ENST00000490812 IL23AQ9NPF7 189 aa24.61■■□□□ 1.53
PTPN18-215ENST00000490812 TRMT13Q9NUP7 481 aaKnown RBP24.61■■□□□ 1.53
PTPN18-215ENST00000490812 STXBP5LQ9Y2K9 1186 aa24.61■■□□□ 1.53
PTPN18-215ENST00000490812 FRMPD4Q14CM0 1322 aa24.61■■□□□ 1.53
PTPN18-215ENST00000490812 RGS20O76081 388 aa24.6■■□□□ 1.53
PTPN18-215ENST00000490812 CASTP20810 708 aaKnown RBP24.6■■□□□ 1.53
PTPN18-215ENST00000490812 LAMC2Q13753 1193 aa24.6■■□□□ 1.53
PTPN18-215ENST00000490812 FAM47CQ5HY64 1035 aa24.6■■□□□ 1.53
PTPN18-215ENST00000490812 FCHSD1Q86WN1 690 aa24.6■■□□□ 1.53
PTPN18-215ENST00000490812 PIBF1Q8WXW3 757 aa24.6■■□□□ 1.53
PTPN18-215ENST00000490812 NEK1Q96PY6 1258 aa24.6■■□□□ 1.53
PTPN18-215ENST00000490812 MYH7BA7E2Y1 1941 aa24.6■■□□□ 1.53
PTPN18-215ENST00000490812 COL6A3P12111 3177 aa24.59■■□□□ 1.53
PTPN18-215ENST00000490812 PLEKHA8P1O95397 391 aa24.59■■□□□ 1.53
PTPN18-215ENST00000490812 TGFB3P10600 412 aa24.59■■□□□ 1.53
PTPN18-215ENST00000490812 KRT32Q14532 448 aa24.59■■□□□ 1.53
PTPN18-215ENST00000490812 DGKDQ16760 1214 aa24.59■■□□□ 1.53
PTPN18-215ENST00000490812 RASIP1Q5U651 963 aa24.59■■□□□ 1.53
PTPN18-215ENST00000490812 SRBD1Q8N5C6 995 aaKnown RBP24.59■■□□□ 1.53
PTPN18-215ENST00000490812 IL31RAQ8NI17 732 aa24.59■■□□□ 1.53
PTPN18-215ENST00000490812 PPTC7Q8NI37 304 aa24.59■■□□□ 1.53
PTPN18-215ENST00000490812 LRRC2Q9BYS8 371 aa24.59■■□□□ 1.53
PTPN18-215ENST00000490812 UMODL1Q5DID0 1318 aa24.59■■□□□ 1.53
PTPN18-215ENST00000490812 TMEM265A0A087WTH1 108 aa24.58■■□□□ 1.53
PTPN18-215ENST00000490812 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.58■■□□□ 1.53
PTPN18-215ENST00000490812 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.58■■□□□ 1.53
PTPN18-215ENST00000490812 PIK3CDO00329 1044 aa24.58■■□□□ 1.53
PTPN18-215ENST00000490812 STAM2O75886 525 aa24.58■■□□□ 1.53
PTPN18-215ENST00000490812 RXRAP19793 462 aa24.58■■□□□ 1.53
PTPN18-215ENST00000490812 ZNF365Q70YC5 407 aa24.58■■□□□ 1.53
PTPN18-215ENST00000490812 DHX37Q8IY37 1157 aaKnown RBP24.58■■□□□ 1.53
PTPN18-215ENST00000490812 FANCBQ8NB91 859 aa24.58■■□□□ 1.53
PTPN18-215ENST00000490812 WNT8AQ9H1J5 351 aa24.58■■□□□ 1.53
PTPN18-215ENST00000490812 EXOSC10Q01780 885 aaKnown RBP24.57■■□□□ 1.52
PTPN18-215ENST00000490812 SYNE3Q6ZMZ3 975 aa24.57■■□□□ 1.52
PTPN18-215ENST00000490812 DHX32Q7L7V1 743 aaKnown RBP24.57■■□□□ 1.52
PTPN18-215ENST00000490812 SESTD1Q86VW0 696 aa24.57■■□□□ 1.52
PTPN18-215ENST00000490812 CUL5Q93034 780 aa24.57■■□□□ 1.52
PTPN18-215ENST00000490812 MTIF3Q9H2K0 278 aaKnown RBP24.57■■□□□ 1.52
PTPN18-215ENST00000490812 ACRP10323 421 aa24.56■■□□□ 1.52
PTPN18-215ENST00000490812 CYP2C9P11712 490 aa24.56■■□□□ 1.52
PTPN18-215ENST00000490812 CCL23P55773 120 aa24.56■■□□□ 1.52
PTPN18-215ENST00000490812 GNPTABQ3T906 1256 aa24.56■■□□□ 1.52
PTPN18-215ENST00000490812 MYSM1Q5VVJ2 828 aa24.56■■□□□ 1.52
PTPN18-215ENST00000490812 TMTC3Q6ZXV5 915 aa24.56■■□□□ 1.52
PTPN18-215ENST00000490812 MICU3Q86XE3 530 aa24.56■■□□□ 1.52
PTPN18-215ENST00000490812 RASEFQ8IZ41 740 aa24.56■■□□□ 1.52
PTPN18-215ENST00000490812 RPUSD2Q8IZ73 545 aaKnown RBP24.56■■□□□ 1.52
PTPN18-215ENST00000490812 SMARCC2Q8TAQ2 1214 aa24.56■■□□□ 1.52
PTPN18-215ENST00000490812 HERVK_113Q902F9 699 aa24.56■■□□□ 1.52
PTPN18-215ENST00000490812 GUCD1Q96NT3 240 aa24.56■■□□□ 1.52
PTPN18-215ENST00000490812 KATNAL1Q9BW62 490 aa24.56■■□□□ 1.52
PTPN18-215ENST00000490812 PITPNM1O00562 1244 aa24.55■■□□□ 1.52
PTPN18-215ENST00000490812 HMGB1P09429 215 aaKnown RBP24.55■■□□□ 1.52
PTPN18-215ENST00000490812 HOXD8P13378 290 aaPredicted RBP24.55■■□□□ 1.52
PTPN18-215ENST00000490812 CELF3Q5SZQ8 465 aaKnown RBP24.55■■□□□ 1.52
PTPN18-215ENST00000490812 XRRA1Q6P2D8 792 aa24.55■■□□□ 1.52
PTPN18-215ENST00000490812 APOA5Q6Q788 366 aa24.55■■□□□ 1.52
PTPN18-215ENST00000490812 CMTR1Q8N1G2 835 aaKnown RBP24.55■■□□□ 1.52
PTPN18-215ENST00000490812 KAT2BQ92831 832 aa24.55■■□□□ 1.52
PTPN18-215ENST00000490812 RBM28Q9NW13 759 aaKnown RBP24.55■■□□□ 1.52
PTPN18-215ENST00000490812 TANC1Q9C0D5 1861 aa24.54■■□□□ 1.52
PTPN18-215ENST00000490812 PPFIA4O75335 1185 aa24.54■■□□□ 1.52
PTPN18-215ENST00000490812 GGPS1O95749 300 aa24.54■■□□□ 1.52
PTPN18-215ENST00000490812 F2P00734 622 aa24.54■■□□□ 1.52
PTPN18-215ENST00000490812 FGBP02675 491 aa24.54■■□□□ 1.52
PTPN18-215ENST00000490812 PFKMP08237 780 aa24.54■■□□□ 1.52
PTPN18-215ENST00000490812 UBA1P22314 1058 aaKnown RBP24.54■■□□□ 1.52
PTPN18-215ENST00000490812 ADCK5Q3MIX3 580 aa24.54■■□□□ 1.52
PTPN18-215ENST00000490812 FAM161BQ96MY7 647 aa24.54■■□□□ 1.52
PTPN18-215ENST00000490812 INPP4AQ96PE3 977 aaPredicted RBP24.54■■□□□ 1.52
PTPN18-215ENST00000490812 SEMA6BQ9H3T3 888 aa24.54■■□□□ 1.52
PTPN18-215ENST00000490812 NOD1Q9Y239 953 aa24.54■■□□□ 1.52
PTPN18-215ENST00000490812 MEIS2O14770 477 aa24.53■■□□□ 1.52
PTPN18-215ENST00000490812 ICAM3P32942 547 aa24.53■■□□□ 1.52
PTPN18-215ENST00000490812 MRPS9P82933 396 aaKnown RBP24.53■■□□□ 1.52
PTPN18-215ENST00000490812 USP17L6PQ6QN14 398 aa24.53■■□□□ 1.52
PTPN18-215ENST00000490812 RAB11FIP4Q86YS3 637 aa24.53■■□□□ 1.52
PTPN18-215ENST00000490812 KCNB2Q92953 911 aa24.53■■□□□ 1.52
PTPN18-215ENST00000490812 SPATA33Q96N06 139 aa24.53■■□□□ 1.52
PTPN18-215ENST00000490812 NEFLP07196 543 aa24.52■■□□□ 1.52
PTPN18-215ENST00000490812 DNAJB2P25686 324 aa24.52■■□□□ 1.52
PTPN18-215ENST00000490812 RFC2P35250 354 aa24.52■■□□□ 1.52
PTPN18-215ENST00000490812 CHMP4BP1P59074 171 aa24.52■■□□□ 1.52
PTPN18-215ENST00000490812 SP2Q02086 613 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms