RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 DHX16O60231 1041 aaKnown RBP18.53■□□□□ 0.56
PLOD3-216ENST00000489927 BAIAP3O94812 1187 aa18.53■□□□□ 0.56
PLOD3-216ENST00000489927 PARP1P09874 1014 aaKnown RBP18.53■□□□□ 0.56
PLOD3-216ENST00000489927 POU3F3P20264 500 aaPredicted RBP18.53■□□□□ 0.56
PLOD3-216ENST00000489927 GPNMBQ14956 572 aa18.53■□□□□ 0.56
PLOD3-216ENST00000489927 SKIV2LQ15477 1246 aaKnown RBP18.53■□□□□ 0.56
PLOD3-216ENST00000489927 FBXO11Q86XK2 927 aa18.53■□□□□ 0.56
PLOD3-216ENST00000489927 CCDC155Q8N6L0 562 aa18.53■□□□□ 0.56
PLOD3-216ENST00000489927 CAGE1Q8TC20 777 aa18.53■□□□□ 0.56
PLOD3-216ENST00000489927 AFAP1L1Q8TED9 768 aa18.53■□□□□ 0.56
PLOD3-216ENST00000489927 ARNTL2Q8WYA1 636 aa18.53■□□□□ 0.56
PLOD3-216ENST00000489927 DIAPH3Q9NSV4 1193 aa18.53■□□□□ 0.56
PLOD3-216ENST00000489927 DDX41Q9UJV9 622 aaKnown RBP18.53■□□□□ 0.56
PLOD3-216ENST00000489927 MRPL11Q9Y3B7 192 aaKnown RBP18.53■□□□□ 0.56
PLOD3-216ENST00000489927 KIF28PB7ZC32 967 aa18.52■□□□□ 0.56
PLOD3-216ENST00000489927 GTPBP6O43824 516 aaPredicted RBP18.52■□□□□ 0.56
PLOD3-216ENST00000489927 BMP1P13497 986 aa18.52■□□□□ 0.56
PLOD3-216ENST00000489927 EIF2AK2P19525 551 aaKnown RBP18.52■□□□□ 0.56
PLOD3-216ENST00000489927 CASTP20810 708 aaKnown RBP18.52■□□□□ 0.56
PLOD3-216ENST00000489927 COL9A1P20849 921 aa18.52■□□□□ 0.56
PLOD3-216ENST00000489927 NUCB1Q02818 461 aa18.52■□□□□ 0.56
PLOD3-216ENST00000489927 IMMTQ16891 758 aaKnown RBP18.52■□□□□ 0.56
PLOD3-216ENST00000489927 ARHGEF16Q5VV41 709 aa18.52■□□□□ 0.56
PLOD3-216ENST00000489927 KRT40Q6A162 431 aa18.52■□□□□ 0.56
PLOD3-216ENST00000489927 DHX38Q92620 1227 aaKnown RBP18.52■□□□□ 0.56
PLOD3-216ENST00000489927 NECAB3Q96P71 396 aaPredicted RBP18.52■□□□□ 0.56
PLOD3-216ENST00000489927 RWDD1Q9H446 243 aaPredicted RBP18.52■□□□□ 0.56
PLOD3-216ENST00000489927 EIF3JO75822 258 aaKnown RBP18.51■□□□□ 0.55
PLOD3-216ENST00000489927 IGHDP01880 384 aa18.51■□□□□ 0.55
PLOD3-216ENST00000489927 SELPP16109 830 aa18.51■□□□□ 0.55
PLOD3-216ENST00000489927 AAMPQ13685 434 aa18.51■□□□□ 0.55
PLOD3-216ENST00000489927 DGKDQ16760 1214 aa18.51■□□□□ 0.55
PLOD3-216ENST00000489927 LRRC8DQ7L1W4 858 aa18.51■□□□□ 0.55
PLOD3-216ENST00000489927 SPRED2Q7Z698 418 aa18.51■□□□□ 0.55
PLOD3-216ENST00000489927 EMID1Q96A84 441 aaPredicted RBP18.51■□□□□ 0.55
PLOD3-216ENST00000489927 DSCC1Q9BVC3 393 aa18.51■□□□□ 0.55
PLOD3-216ENST00000489927 PXMP2Q9NR77 195 aa18.51■□□□□ 0.55
PLOD3-216ENST00000489927 GTF2IRD1Q9UHL9 959 aa18.51■□□□□ 0.55
PLOD3-216ENST00000489927 MRVI1Q9Y6F6 885 aa18.51■□□□□ 0.55
PLOD3-216ENST00000489927 BDP1A6H8Y1 2624 aa18.51■□□□□ 0.55
PLOD3-216ENST00000489927 OPLAHO14841 1288 aa18.5■□□□□ 0.55
PLOD3-216ENST00000489927 TLL1O43897 1013 aa18.5■□□□□ 0.55
PLOD3-216ENST00000489927 CFBP00751 764 aa18.5■□□□□ 0.55
PLOD3-216ENST00000489927 NR3C2P08235 984 aa18.5■□□□□ 0.55
PLOD3-216ENST00000489927 KCNJ6P48051 423 aa18.5■□□□□ 0.55
PLOD3-216ENST00000489927 KCNQ1P51787 676 aa18.5■□□□□ 0.55
PLOD3-216ENST00000489927 WDR5P61964 334 aaKnown RBP18.5■□□□□ 0.55
PLOD3-216ENST00000489927 AAK1Q2M2I8 961 aa18.5■□□□□ 0.55
PLOD3-216ENST00000489927 TMCO2Q7Z6W1 182 aaPredicted RBP18.5■□□□□ 0.55
PLOD3-216ENST00000489927 STAG2Q8N3U4 1231 aa18.5■□□□□ 0.55
PLOD3-216ENST00000489927 C7orf31Q8N865 590 aa18.5■□□□□ 0.55
PLOD3-216ENST00000489927 HDAC6Q9UBN7 1215 aa18.5■□□□□ 0.55
PLOD3-216ENST00000489927 TET1Q8NFU7 2136 aa18.49■□□□□ 0.55
PLOD3-216ENST00000489927 LCHNA4D1U4 455 aa18.49■□□□□ 0.55
PLOD3-216ENST00000489927 HIP1O00291 1037 aa18.49■□□□□ 0.55
PLOD3-216ENST00000489927 NBNO60934 754 aa18.49■□□□□ 0.55
PLOD3-216ENST00000489927 ZNF286BP0CG31 522 aa18.49■□□□□ 0.55
PLOD3-216ENST00000489927 CKBP12277 381 aa18.49■□□□□ 0.55
PLOD3-216ENST00000489927 PSEN2P49810 448 aa18.49■□□□□ 0.55
PLOD3-216ENST00000489927 HSD17B4P51659 736 aa18.49■□□□□ 0.55
PLOD3-216ENST00000489927 RBL2Q08999 1139 aa18.49■□□□□ 0.55
PLOD3-216ENST00000489927 LAMC2Q13753 1193 aa18.49■□□□□ 0.55
PLOD3-216ENST00000489927 UBAC1Q9BSL1 405 aa18.49■□□□□ 0.55
PLOD3-216ENST00000489927 ALG1Q9BT22 464 aa18.49■□□□□ 0.55
PLOD3-216ENST00000489927 AMNQ9BXJ7 453 aa18.49■□□□□ 0.55
PLOD3-216ENST00000489927 KRT23Q9C075 422 aa18.49■□□□□ 0.55
PLOD3-216ENST00000489927 CTNNA3Q9UI47 895 aa18.49■□□□□ 0.55
PLOD3-216ENST00000489927 KIAA1217Q5T5P2 1943 aa18.49■□□□□ 0.55
PLOD3-216ENST00000489927 RBAK-RBAKDNI3L0D1 243 aa18.48■□□□□ 0.55
PLOD3-216ENST00000489927 PPP1R11O60927 126 aaPredicted RBP18.48■□□□□ 0.55
PLOD3-216ENST00000489927 F2P00734 622 aa18.48■□□□□ 0.55
PLOD3-216ENST00000489927 CXCL10P02778 98 aa18.48■□□□□ 0.55
PLOD3-216ENST00000489927 DEFB103AP81534 67 aa18.48■□□□□ 0.55
PLOD3-216ENST00000489927 GRB10Q13322 594 aa18.48■□□□□ 0.55
PLOD3-216ENST00000489927 MFSD10Q14728 455 aa18.48■□□□□ 0.55
PLOD3-216ENST00000489927 KIAA0753Q2KHM9 967 aa18.48■□□□□ 0.55
PLOD3-216ENST00000489927 TCTN1Q2MV58 587 aa18.48■□□□□ 0.55
PLOD3-216ENST00000489927 IFIT1BQ5T764 474 aaKnown RBP18.48■□□□□ 0.55
PLOD3-216ENST00000489927 CNKSR3Q6P9H4 555 aa18.48■□□□□ 0.55
PLOD3-216ENST00000489927 DHX37Q8IY37 1157 aaKnown RBP18.48■□□□□ 0.55
PLOD3-216ENST00000489927 PPTC7Q8NI37 304 aa18.48■□□□□ 0.55
PLOD3-216ENST00000489927 KATNAL1Q9BW62 490 aa18.48■□□□□ 0.55
PLOD3-216ENST00000489927 CNNM2Q9H8M5 875 aa18.48■□□□□ 0.55
PLOD3-216ENST00000489927 RAPGEFL1Q9UHV5 662 aa18.48■□□□□ 0.55
PLOD3-216ENST00000489927 PRRC2BQ5JSZ5 2229 aaKnown RBP18.47■□□□□ 0.55
PLOD3-216ENST00000489927 PTPRSQ13332 1948 aa18.47■□□□□ 0.55
PLOD3-216ENST00000489927 KLRF2D3W0D1 207 aa18.47■□□□□ 0.55
PLOD3-216ENST00000489927 HAS3O00219 553 aa18.47■□□□□ 0.55
PLOD3-216ENST00000489927 LPXNO60711 386 aa18.47■□□□□ 0.55
PLOD3-216ENST00000489927 RGS20O76081 388 aa18.47■□□□□ 0.55
PLOD3-216ENST00000489927 PARNO95453 639 aaKnown RBP18.47■□□□□ 0.55
PLOD3-216ENST00000489927 GHRHRQ02643 423 aa18.47■□□□□ 0.55
PLOD3-216ENST00000489927 PDCD2LQ9BRP1 358 aa18.47■□□□□ 0.55
PLOD3-216ENST00000489927 ZBED2Q9BTP6 218 aa18.47■□□□□ 0.55
PLOD3-216ENST00000489927 IL25Q9H293 177 aa18.47■□□□□ 0.55
PLOD3-216ENST00000489927 TRIP12Q14669 1992 aaPredicted RBP18.46■□□□□ 0.55
PLOD3-216ENST00000489927 ZBTB5O15062 677 aa18.46■□□□□ 0.55
PLOD3-216ENST00000489927 SORBS3O60504 671 aa18.46■□□□□ 0.55
PLOD3-216ENST00000489927 MYCLP12524 364 aaPredicted RBP18.46■□□□□ 0.55
PLOD3-216ENST00000489927 HOXA13P31271 388 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms