RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 DEFB118Q96PH6 123 aa9.48□□□□□ -0.89
SF1-218ENST00000489544 UIMC1Q96RL1 719 aa9.48□□□□□ -0.89
SF1-218ENST00000489544 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.48□□□□□ -0.896e-7■■□□□ 12.6
SF1-218ENST00000489544 RNF208Q9H0X6 261 aa9.48□□□□□ -0.89
SF1-218ENST00000489544 ABHD16BQ9H3Z7 469 aa9.48□□□□□ -0.89
SF1-218ENST00000489544 HMX1Q9NP08 348 aaPredicted RBP9.48□□□□□ -0.89
SF1-218ENST00000489544 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.48□□□□□ -0.89
SF1-218ENST00000489544 FRMPD4Q14CM0 1322 aa9.48□□□□□ -0.89
SF1-218ENST00000489544 TNRC18O15417 2968 aaPredicted RBP9.47□□□□□ -0.89
SF1-218ENST00000489544 KIF28PB7ZC32 967 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 ARIH2O95376 493 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 SMPD1P17405 629 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 XBP1P17861 261 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 CCND2P30279 289 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 KRT2P35908 639 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 RGS19P49795 217 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 AP3B2Q13367 1082 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 TRIM29Q14134 588 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 STXBP2Q15833 593 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 CCDC144BQ3MJ40 725 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 PIK3AP1Q6ZUJ8 805 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 DIS3L2Q8IYB7 885 aaKnown RBP9.47□□□□□ -0.89
SF1-218ENST00000489544 DAGLBQ8NCG7 672 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 FBXO18Q8NFZ0 1043 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 BICD2Q8TD16 824 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 TBCKQ8TEA7 893 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 COPS5Q92905 334 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 TNFRSF25Q93038 417 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 IWS1Q96ST2 819 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 MAF1Q9H063 256 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 BCAS3Q9H6U6 928 aa9.47□□□□□ -0.89
SF1-218ENST00000489544 LRRC37A2A6NM11 1700 aa9.46□□□□□ -0.89
SF1-218ENST00000489544 FAM86B1E9PN63 330 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 WNT7AO00755 349 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 SEPT4O43236 478 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 EIF3JO75822 258 aaKnown RBP9.46□□□□□ -0.9
SF1-218ENST00000489544 FOSP01100 380 aaPredicted RBP9.46□□□□□ -0.9
SF1-218ENST00000489544 MYCNP04198 464 aaPredicted RBP9.46□□□□□ -0.9
SF1-218ENST00000489544 FAM86B2P0C5J1 330 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 ITGB5P18084 799 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 SREBF1P36956 1147 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 SOX10P56693 466 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 ARHGAP4P98171 946 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 SP2Q02086 613 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 SEMA3FQ13275 785 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 LY6KQ17RY6 165 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 INF2Q27J81 1249 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 PCNX4Q63HM2 1172 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 LARP1BQ659C4 914 aaKnown RBP9.46□□□□□ -0.9
SF1-218ENST00000489544 LHX8Q68G74 356 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 GALNT17Q6IS24 598 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 CRYGNQ8WXF5 182 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 WDR11Q9BZH6 1224 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 GLT8D2Q9H1C3 349 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 VTA1Q9NP79 307 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 PAK6Q9NQU5 681 aaPredicted RBP9.46□□□□□ -0.9
SF1-218ENST00000489544 PKD2L1Q9P0L9 805 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 DDX20Q9UHI6 824 aaKnown RBP9.46□□□□□ -0.9
SF1-218ENST00000489544 FAM184BQ9ULE4 1060 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 TELO2Q9Y4R8 837 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 BRCA2P51587 3418 aa9.46□□□□□ -0.9
SF1-218ENST00000489544 LOC102724159A0A0B4J2E5 919 aa9.45□□□□□ -0.9
SF1-218ENST00000489544 CCDC194A0A1B0GVG4 234 aa9.45□□□□□ -0.9
SF1-218ENST00000489544 MYADML2A6NDP7 307 aa9.45□□□□□ -0.9
SF1-218ENST00000489544 B4DLN1 442 aa9.45□□□□□ -0.9
SF1-218ENST00000489544 TDP2O95551 362 aa9.45□□□□□ -0.9
SF1-218ENST00000489544 PGK1P00558 417 aa9.45□□□□□ -0.9
SF1-218ENST00000489544 HSP90AA1P07900 732 aaKnown RBP9.45□□□□□ -0.9
SF1-218ENST00000489544 ARP10275 920 aa9.45□□□□□ -0.9
SF1-218ENST00000489544 TXNP10599 105 aaKnown RBP9.45□□□□□ -0.9
SF1-218ENST00000489544 AKR1A1P14550 325 aa9.45□□□□□ -0.9
SF1-218ENST00000489544 EN2P19622 333 aaPredicted RBP9.45□□□□□ -0.9
SF1-218ENST00000489544 ZNF76P36508 570 aa9.45□□□□□ -0.9
SF1-218ENST00000489544 TNFAIP2Q03169 654 aa9.45□□□□□ -0.9
SF1-218ENST00000489544 NONOQ15233 471 aaKnown RBP eCLIP9.45□□□□□ -0.9
SF1-218ENST00000489544 PWP2Q15269 919 aaKnown RBP9.45□□□□□ -0.9
SF1-218ENST00000489544 CCDC62Q6P9F0 684 aa9.45□□□□□ -0.9
SF1-218ENST00000489544 U2AF1L4Q8WU68 220 aaKnown RBP9.45□□□□□ -0.9
SF1-218ENST00000489544 INTS4Q96HW7 963 aaKnown RBP9.45□□□□□ -0.9
SF1-218ENST00000489544 INPP4AQ96PE3 977 aaPredicted RBP9.45□□□□□ -0.9
SF1-218ENST00000489544 MPHOSPH6Q99547 160 aaKnown RBP9.45□□□□□ -0.9
SF1-218ENST00000489544 NRBP1Q9UHY1 535 aa9.45□□□□□ -0.9
SF1-218ENST00000489544 DDX41Q9UJV9 622 aaKnown RBP9.45□□□□□ -0.9
SF1-218ENST00000489544 UBIAD1Q9Y5Z9 338 aa9.45□□□□□ -0.9
SF1-218ENST00000489544 MRVI1Q9Y6F6 885 aa9.45□□□□□ -0.9
SF1-218ENST00000489544 RBM47A0AV96 593 aaKnown RBP9.44□□□□□ -0.9
SF1-218ENST00000489544 VPS37CA5D8V6 355 aaPredicted RBP9.44□□□□□ -0.9
SF1-218ENST00000489544 H3BQV1 296 aa9.44□□□□□ -0.9
SF1-218ENST00000489544 DYNC1LI2O43237 492 aaPredicted RBP9.44□□□□□ -0.9
SF1-218ENST00000489544 ATP9AO75110 1047 aa9.44□□□□□ -0.9
SF1-218ENST00000489544 GJB1P08034 283 aa9.44□□□□□ -0.9
SF1-218ENST00000489544 CYP3A4P08684 503 aa9.44□□□□□ -0.9
SF1-218ENST00000489544 RARBP10826 455 aa9.44□□□□□ -0.9
SF1-218ENST00000489544 ATP2B1P20020 1258 aa9.44□□□□□ -0.9
SF1-218ENST00000489544 SYT1P21579 422 aa9.44□□□□□ -0.9
SF1-218ENST00000489544 BEX3Q00994 111 aa9.44□□□□□ -0.9
SF1-218ENST00000489544 SAFBQ15424 915 aaKnown RBP eCLIP9.44□□□□□ -0.9
SF1-218ENST00000489544 LETM2Q2VYF4 491 aa9.44□□□□□ -0.9
SF1-218ENST00000489544 DUSP28Q4G0W2 176 aa9.44□□□□□ -0.9
SF1-218ENST00000489544 CEP55Q53EZ4 464 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms