RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 NSUN4Q96CB9 384 aaKnown RBP9.18□□□□□ -0.94
SMC6-209ENST00000489535 STRBPQ96SI9 672 aaKnown RBP9.18□□□□□ -0.94
SMC6-209ENST00000489535 POP1Q99575 1024 aaKnown RBP9.18□□□□□ -0.94
SMC6-209ENST00000489535 TM6SF1Q9BZW5 370 aa9.18□□□□□ -0.94
SMC6-209ENST00000489535 COA1Q9GZY4 146 aa9.18□□□□□ -0.94
SMC6-209ENST00000489535 OSGEPQ9NPF4 335 aa9.18□□□□□ -0.94
SMC6-209ENST00000489535 CTNNA3Q9UI47 895 aa9.18□□□□□ -0.94
SMC6-209ENST00000489535 TAF6LQ9Y6J9 622 aa9.18□□□□□ -0.94
SMC6-209ENST00000489535 SIPA1L1O43166 1804 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 A0A0G2JLW4 131 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 MEGF11A6BM72 1044 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 KRTAP9-7A8MTY7 169 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 PATL2C9JE40 543 aaKnown RBP9.17□□□□□ -0.94
SMC6-209ENST00000489535 APPP05067 770 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 LDHBP07195 334 aaKnown RBP9.17□□□□□ -0.94
SMC6-209ENST00000489535 HSP90AA1P07900 732 aaKnown RBP9.17□□□□□ -0.94
SMC6-209ENST00000489535 GNAT2P19087 354 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 SCNN1AP37088 669 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 MCM2P49736 904 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 IMMTQ16891 758 aaKnown RBP9.17□□□□□ -0.94
SMC6-209ENST00000489535 FAM26DQ5JW98 314 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 TTLL5Q6EMB2 1281 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 BLOC1S2Q6QNY1 142 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 RUFY3Q7L099 469 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 TTLL6Q8N841 843 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 CEP120Q8N960 986 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 ZNF384Q8TF68 577 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 TTC14Q96N46 770 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 SLKQ9H2G2 1235 aaPredicted RBP9.17□□□□□ -0.94
SMC6-209ENST00000489535 PAK6Q9NQU5 681 aaPredicted RBP9.17□□□□□ -0.94
SMC6-209ENST00000489535 CYP46A1Q9Y6A2 500 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 SLC4A4Q9Y6R1 1079 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 ATAD5Q96QE3 1844 aa9.17□□□□□ -0.94
SMC6-209ENST00000489535 ZMYM6O95789 1325 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 FAM205AQ6ZU69 1335 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 DBX1A6NMT0 343 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 ZNF213O14771 459 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 IGSF3O75054 1194 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 FGAP02671 866 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 KCNA3P22001 575 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 RPS6KB1P23443 525 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 AK2P54819 239 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 HAND2P61296 217 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 DYNLL1P63167 89 aaKnown RBP9.16□□□□□ -0.94
SMC6-209ENST00000489535 ZNF124Q15973 351 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 TMED8Q6PL24 325 aaPredicted RBP9.16□□□□□ -0.94
SMC6-209ENST00000489535 STOX1Q6ZVD7 989 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 IFNL3Q8IZI9 196 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 SUPT20HQ8NEM7 779 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 NEK1Q96PY6 1258 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 NAPBQ9H115 298 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 PDRG1Q9NUG6 133 aa9.16□□□□□ -0.94
SMC6-209ENST00000489535 GSG1L2A8MUP6 293 aa9.15□□□□□ -0.94
SMC6-209ENST00000489535 E7EWF7 191 aa9.15□□□□□ -0.94
SMC6-209ENST00000489535 PRKAB2O43741 272 aa9.15□□□□□ -0.94
SMC6-209ENST00000489535 TDO2P48775 406 aa9.15□□□□□ -0.94
SMC6-209ENST00000489535 TGFB2P61812 414 aa9.15□□□□□ -0.94
SMC6-209ENST00000489535 GSTO1P78417 241 aa9.15□□□□□ -0.94
SMC6-209ENST00000489535 ALX1Q15699 326 aa9.15□□□□□ -0.94
SMC6-209ENST00000489535 CCDC93Q567U6 631 aa9.15□□□□□ -0.94
SMC6-209ENST00000489535 MFSD14BQ5SR56 506 aa9.15□□□□□ -0.94
SMC6-209ENST00000489535 AGBL5Q8NDL9 886 aa9.15□□□□□ -0.94
SMC6-209ENST00000489535 FLCNQ8NFG4 579 aa9.15□□□□□ -0.94
SMC6-209ENST00000489535 TBC1D22AQ8WUA7 517 aa9.15□□□□□ -0.94
SMC6-209ENST00000489535 RIOK1Q9BRS2 568 aaKnown RBP9.15□□□□□ -0.94
SMC6-209ENST00000489535 RTFDC1Q9BY42 306 aaPredicted RBP9.15□□□□□ -0.94
SMC6-209ENST00000489535 DBNDD1Q9H9R9 158 aa9.15□□□□□ -0.94
SMC6-209ENST00000489535 EPB41L4AQ9HCS5 686 aaPredicted RBP9.15□□□□□ -0.94
SMC6-209ENST00000489535 AATFQ9NY61 560 aaKnown RBP eCLIP9.15□□□□□ -0.94
SMC6-209ENST00000489535 PPP1R1BQ9UD71 204 aaPredicted RBP9.15□□□□□ -0.94
SMC6-209ENST00000489535 POLR2AP24928 1970 aaKnown RBP9.15□□□□□ -0.95
SMC6-209ENST00000489535 COL4A5P29400 1685 aa9.14□□□□□ -0.95
SMC6-209ENST00000489535 MROH7-TTC4A0A0A0MT08 1334 aa9.14□□□□□ -0.95
SMC6-209ENST00000489535 A6NJR5 290 aa9.14□□□□□ -0.95
SMC6-209ENST00000489535 CYP26A1O43174 497 aa9.14□□□□□ -0.95
SMC6-209ENST00000489535 ECE2O60344 883 aa9.14□□□□□ -0.95
SMC6-209ENST00000489535 LDHCP07864 332 aa9.14□□□□□ -0.95
SMC6-209ENST00000489535 HMGB1P09429 215 aaKnown RBP9.14□□□□□ -0.95
SMC6-209ENST00000489535 AOC3Q16853 763 aa9.14□□□□□ -0.95
SMC6-209ENST00000489535 TTC39BQ5VTQ0 682 aaPredicted RBP9.14□□□□□ -0.95
SMC6-209ENST00000489535 SDR42E1Q8WUS8 393 aa9.14□□□□□ -0.95
SMC6-209ENST00000489535 TMX3Q96JJ7 454 aa9.14□□□□□ -0.95
SMC6-209ENST00000489535 TCEANC2Q96MN5 208 aa9.14□□□□□ -0.95
SMC6-209ENST00000489535 NOL10Q9BSC4 688 aaKnown RBP9.14□□□□□ -0.95
SMC6-209ENST00000489535 NACAP1Q9BZK3 213 aa9.14□□□□□ -0.95
SMC6-209ENST00000489535 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.14□□□□□ -0.95
SMC6-209ENST00000489535 PPIP5K2O43314 1243 aa9.13□□□□□ -0.95
SMC6-209ENST00000489535 TIAF1O95411 115 aa9.13□□□□□ -0.95
SMC6-209ENST00000489535 ADMP35318 185 aa9.13□□□□□ -0.95
SMC6-209ENST00000489535 Q6ZUG5 572 aa9.13□□□□□ -0.95
SMC6-209ENST00000489535 RTKN2Q8IZC4 609 aa9.13□□□□□ -0.95
SMC6-209ENST00000489535 NCOA7Q8NI08 942 aa9.13□□□□□ -0.95
SMC6-209ENST00000489535 PIK3R5Q8WYR1 880 aa9.13□□□□□ -0.95
SMC6-209ENST00000489535 GLMNQ92990 594 aa9.13□□□□□ -0.95
SMC6-209ENST00000489535 ZSCAN31Q96LW9 406 aaPredicted RBP9.13□□□□□ -0.95
SMC6-209ENST00000489535 CRNKL1Q9BZJ0 848 aaKnown RBP9.13□□□□□ -0.95
SMC6-209ENST00000489535 SAP130Q9H0E3 1048 aa9.13□□□□□ -0.95
SMC6-209ENST00000489535 ALDH8A1Q9H2A2 487 aaPredicted RBP9.13□□□□□ -0.95
SMC6-209ENST00000489535 LIMCH1Q9UPQ0 1083 aa9.13□□□□□ -0.95
SMC6-209ENST00000489535 GREB1LQ9C091 1923 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms