RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 PCDHA6Q9UN73 950 aa17.73■□□□□ 0.43
SMIM11A-206ENST00000489469 PCDHA8Q9Y5H6 950 aa17.73■□□□□ 0.43
SMIM11A-206ENST00000489469 CUL4AQ13619 759 aa17.72■□□□□ 0.43
SMIM11A-206ENST00000489469 PRAMEF19Q5SWL8 479 aa17.72■□□□□ 0.43
SMIM11A-206ENST00000489469 PCNX4Q63HM2 1172 aa17.72■□□□□ 0.43
SMIM11A-206ENST00000489469 IQSEC1Q6DN90 963 aa17.72■□□□□ 0.43
SMIM11A-206ENST00000489469 BLIDQ8IZY5 108 aa17.72■□□□□ 0.43
SMIM11A-206ENST00000489469 TRPV1Q8NER1 839 aa17.72■□□□□ 0.43
SMIM11A-206ENST00000489469 ANO3Q9BYT9 981 aa17.72■□□□□ 0.43
SMIM11A-206ENST00000489469 DDX20Q9UHI6 824 aaKnown RBP17.72■□□□□ 0.43
SMIM11A-206ENST00000489469 CENPFP49454 3210 aa17.72■□□□□ 0.43
SMIM11A-206ENST00000489469 MYCP01106 439 aaPredicted RBP17.71■□□□□ 0.43
SMIM11A-206ENST00000489469 MYCLP12524 364 aaPredicted RBP17.71■□□□□ 0.43
SMIM11A-206ENST00000489469 KCNV1Q6PIU1 500 aa17.71■□□□□ 0.43
SMIM11A-206ENST00000489469 EEPD1Q7L9B9 569 aa17.71■□□□□ 0.43
SMIM11A-206ENST00000489469 FBXO16Q8IX29 292 aaPredicted RBP17.71■□□□□ 0.43
SMIM11A-206ENST00000489469 SCFD2Q8WU76 684 aa17.71■□□□□ 0.43
SMIM11A-206ENST00000489469 SMC3Q9UQE7 1217 aa17.71■□□□□ 0.43
SMIM11A-206ENST00000489469 RBM47A0AV96 593 aaKnown RBP17.7■□□□□ 0.42
SMIM11A-206ENST00000489469 RARBP10826 455 aa17.7■□□□□ 0.42
SMIM11A-206ENST00000489469 SREBF1P36956 1147 aa17.7■□□□□ 0.42
SMIM11A-206ENST00000489469 GJA8P48165 433 aa17.7■□□□□ 0.42
SMIM11A-206ENST00000489469 CCDC144BQ3MJ40 725 aa17.7■□□□□ 0.42
SMIM11A-206ENST00000489469 GNPTABQ3T906 1256 aa17.7■□□□□ 0.42
SMIM11A-206ENST00000489469 JAKMIP3Q5VZ66 844 aa17.7■□□□□ 0.42
SMIM11A-206ENST00000489469 TAPT1Q6NXT6 567 aa17.7■□□□□ 0.42
SMIM11A-206ENST00000489469 SHISA4Q96DD7 197 aa17.7■□□□□ 0.42
SMIM11A-206ENST00000489469 INTS4Q96HW7 963 aaKnown RBP17.7■□□□□ 0.42
SMIM11A-206ENST00000489469 C8orf76Q96K31 380 aa17.7■□□□□ 0.42
SMIM11A-206ENST00000489469 DEFB118Q96PH6 123 aa17.7■□□□□ 0.42
SMIM11A-206ENST00000489469 CCDC85CA6NKD9 419 aa17.69■□□□□ 0.42
SMIM11A-206ENST00000489469 NKRFO15226 690 aaKnown RBP eCLIP17.69■□□□□ 0.42
SMIM11A-206ENST00000489469 SGPL1O95470 568 aa17.69■□□□□ 0.42
SMIM11A-206ENST00000489469 TTLL4Q14679 1199 aa17.69■□□□□ 0.42
SMIM11A-206ENST00000489469 SAFBQ15424 915 aaKnown RBP eCLIP17.69■□□□□ 0.42
SMIM11A-206ENST00000489469 KRT25Q7Z3Z0 450 aa17.69■□□□□ 0.42
SMIM11A-206ENST00000489469 NLRX1Q86UT6 975 aa17.69■□□□□ 0.42
SMIM11A-206ENST00000489469 U2AF1L4Q8WU68 220 aaKnown RBP17.69■□□□□ 0.42
SMIM11A-206ENST00000489469 TMEM260Q9NX78 707 aa17.69■□□□□ 0.42
SMIM11A-206ENST00000489469 KCNJ14Q9UNX9 436 aa17.69■□□□□ 0.42
SMIM11A-206ENST00000489469 FARP1Q9Y4F1 1045 aaPredicted RBP17.69■□□□□ 0.42
SMIM11A-206ENST00000489469 M0R2N6 131 aa17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 DUSP11O75319 330 aaKnown RBP17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 MMP1P03956 469 aa17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 TGFB3P10600 412 aa17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 GJB2P29033 226 aa17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 KRT2P35908 639 aa17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 TNFAIP2Q03169 654 aa17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 NPY5RQ15761 445 aa17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 KRT40Q6A162 431 aa17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 IL31RAQ8NI17 732 aa17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 CDHR1Q96JP9 859 aa17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 INPP4AQ96PE3 977 aaPredicted RBP17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 WDR11Q9BZH6 1224 aa17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 CRISPLD2Q9H0B8 497 aa17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 SPC25Q9HBM1 224 aa17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 Q9Y3F1 56 aa17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 DDX49Q9Y6V7 483 aaKnown RBP17.68■□□□□ 0.42
SMIM11A-206ENST00000489469 MAFGO15525 162 aa17.67■□□□□ 0.42
SMIM11A-206ENST00000489469 DTNBO60941 627 aa17.67■□□□□ 0.42
SMIM11A-206ENST00000489469 CYP3A4P08684 503 aa17.67■□□□□ 0.42
SMIM11A-206ENST00000489469 ADCYAP1R1P41586 468 aa17.67■□□□□ 0.42
SMIM11A-206ENST00000489469 MRPS9P82933 396 aaKnown RBP17.67■□□□□ 0.42
SMIM11A-206ENST00000489469 ARHGAP4P98171 946 aa17.67■□□□□ 0.42
SMIM11A-206ENST00000489469 DUSP28Q4G0W2 176 aa17.67■□□□□ 0.42
SMIM11A-206ENST00000489469 LHX8Q68G74 356 aa17.67■□□□□ 0.42
SMIM11A-206ENST00000489469 SEPT14Q6ZU15 432 aa17.67■□□□□ 0.42
SMIM11A-206ENST00000489469 ANKLE1Q8NAG6 615 aa17.67■□□□□ 0.42
SMIM11A-206ENST00000489469 FBXO18Q8NFZ0 1043 aa17.67■□□□□ 0.42
SMIM11A-206ENST00000489469 OGDHLQ9ULD0 1010 aa17.67■□□□□ 0.42
SMIM11A-206ENST00000489469 CCDC194A0A1B0GVG4 234 aa17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 FIBPO43427 364 aa17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 TFRCP02786 760 aaKnown RBP17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 TXNP10599 105 aaKnown RBP17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 PDCP20941 246 aa17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 ICAM3P32942 547 aa17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 USP11P51784 963 aa17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 NONOQ15233 471 aaKnown RBP eCLIP17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 DIS3L2Q8IYB7 885 aaKnown RBP17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 ARRDC4Q8NCT1 418 aa17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 RASGRP4Q8TDF6 673 aa17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 GPRASP2Q96D09 838 aa17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 PGBD1Q96JS3 809 aa17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 XPNPEP3Q9NQH7 507 aa17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 PDGFCQ9NRA1 345 aa17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 GJB4Q9NTQ9 266 aa17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 MRVI1Q9Y6F6 885 aa17.66■□□□□ 0.42
SMIM11A-206ENST00000489469 HSP90AA1P07900 732 aaKnown RBP17.65■□□□□ 0.42
SMIM11A-206ENST00000489469 SMPD1P17405 629 aa17.65■□□□□ 0.42
SMIM11A-206ENST00000489469 ZNF76P36508 570 aa17.65■□□□□ 0.42
SMIM11A-206ENST00000489469 NIPA1Q7RTP0 329 aa17.65■□□□□ 0.42
SMIM11A-206ENST00000489469 RNF180Q86T96 592 aa17.65■□□□□ 0.42
SMIM11A-206ENST00000489469 CRYGNQ8WXF5 182 aa17.65■□□□□ 0.42
SMIM11A-206ENST00000489469 AP5M1Q9H0R1 490 aa17.65■□□□□ 0.42
SMIM11A-206ENST00000489469 GNEQ9Y223 722 aaKnown RBP17.65■□□□□ 0.42
SMIM11A-206ENST00000489469 UBIAD1Q9Y5Z9 338 aa17.65■□□□□ 0.42
SMIM11A-206ENST00000489469 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.64■□□□□ 0.41
SMIM11A-206ENST00000489469 RGS20O76081 388 aa17.64■□□□□ 0.41
SMIM11A-206ENST00000489469 CIITAP33076 1130 aa17.64■□□□□ 0.41
SMIM11A-206ENST00000489469 FOSBP53539 338 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms