RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 ZNF784Q8NCA9 323 aaPredicted RBP23.61■■□□□ 1.37
SND1-214ENST00000489417 SHCBP1Q8NEM2 672 aa23.61■■□□□ 1.37
SND1-214ENST00000489417 GPRC5AQ8NFJ5 357 aa23.61■■□□□ 1.37
SND1-214ENST00000489417 IL31RAQ8NI17 732 aa23.61■■□□□ 1.37
SND1-214ENST00000489417 HAS1Q92839 578 aa23.61■■□□□ 1.37
SND1-214ENST00000489417 EPSTI1Q96J88 318 aa23.61■■□□□ 1.37
SND1-214ENST00000489417 PURBQ96QR8 312 aaKnown RBP23.61■■□□□ 1.37
SND1-214ENST00000489417 IGLV3-22A0A075B6J6 115 aa23.6■■□□□ 1.37
SND1-214ENST00000489417 ZNF202O95125 648 aa23.6■■□□□ 1.37
SND1-214ENST00000489417 FXR2P51116 673 aaKnown RBP eCLIP23.6■■□□□ 1.375e-8■■□□□ 13.9
SND1-214ENST00000489417 PGM5Q15124 567 aa23.6■■□□□ 1.37
SND1-214ENST00000489417 CEP55Q53EZ4 464 aa23.6■■□□□ 1.37
SND1-214ENST00000489417 AK8Q96MA6 479 aa23.6■■□□□ 1.37
SND1-214ENST00000489417 PDCD2LQ9BRP1 358 aa23.6■■□□□ 1.37
SND1-214ENST00000489417 MROH8Q9H579 483 aa23.6■■□□□ 1.37
SND1-214ENST00000489417 MORF4L1Q9UBU8 362 aa23.6■■□□□ 1.37
SND1-214ENST00000489417 IGF2BP3O00425 579 aaKnown RBP eCLIP23.59■■□□□ 1.37
SND1-214ENST00000489417 TECP42680 631 aa23.59■■□□□ 1.37
SND1-214ENST00000489417 INHBEP58166 350 aa23.59■■□□□ 1.37
SND1-214ENST00000489417 CCNA1P78396 465 aa23.59■■□□□ 1.37
SND1-214ENST00000489417 PLA2G4DQ86XP0 818 aa23.59■■□□□ 1.37
SND1-214ENST00000489417 SLFN12Q8IYM2 578 aa23.59■■□□□ 1.37
SND1-214ENST00000489417 ANKRD13CQ8N6S4 541 aa23.59■■□□□ 1.37
SND1-214ENST00000489417 CYP2W1Q8TAV3 490 aa23.59■■□□□ 1.37
SND1-214ENST00000489417 ETNPPLQ8TBG4 499 aa23.59■■□□□ 1.37
SND1-214ENST00000489417 NSUN6Q8TEA1 469 aaKnown RBP23.59■■□□□ 1.37
SND1-214ENST00000489417 LETM1O95202 739 aaPredicted RBP23.59■■□□□ 1.37
SND1-214ENST00000489417 TXLNAP40222 546 aa23.59■■□□□ 1.37
SND1-214ENST00000489417 XRRA1Q6P2D8 792 aa23.59■■□□□ 1.37
SND1-214ENST00000489417 NIPA1Q7RTP0 329 aa23.59■■□□□ 1.37
SND1-214ENST00000489417 FAM20AQ96MK3 541 aa23.59■■□□□ 1.37
SND1-214ENST00000489417 TIGD1Q96MW7 591 aa23.59■■□□□ 1.37
SND1-214ENST00000489417 MXRA8Q9BRK3 442 aa23.59■■□□□ 1.37
SND1-214ENST00000489417 RAB34Q9BZG1 259 aa23.59■■□□□ 1.37
SND1-214ENST00000489417 TNMDQ9H2S6 317 aa23.59■■□□□ 1.37
SND1-214ENST00000489417 TTC12Q9H892 705 aaPredicted RBP23.59■■□□□ 1.37
SND1-214ENST00000489417 MEIS1O00470 390 aa23.58■■□□□ 1.36
SND1-214ENST00000489417 MSH4O15457 936 aa23.58■■□□□ 1.36
SND1-214ENST00000489417 SETQ01105 290 aaPredicted RBP23.58■■□□□ 1.36
SND1-214ENST00000489417 SREBF2Q12772 1141 aa23.58■■□□□ 1.36
SND1-214ENST00000489417 CAMK4Q16566 473 aa23.58■■□□□ 1.36
SND1-214ENST00000489417 IGSF22Q8N9C0 903 aa23.58■■□□□ 1.36
SND1-214ENST00000489417 R3HDMLQ9H3Y0 253 aa23.58■■□□□ 1.36
SND1-214ENST00000489417 UBIAD1Q9Y5Z9 338 aa23.58■■□□□ 1.36
SND1-214ENST00000489417 PP2D1A8MPX8 630 aa23.57■■□□□ 1.36
SND1-214ENST00000489417 POTEB2H3BUK9 544 aa23.57■■□□□ 1.36
SND1-214ENST00000489417 POLR2DO15514 142 aaKnown RBP23.57■■□□□ 1.36
SND1-214ENST00000489417 MYCLP12524 364 aaPredicted RBP23.57■■□□□ 1.36
SND1-214ENST00000489417 CCND2P30279 289 aa23.57■■□□□ 1.36
SND1-214ENST00000489417 MRPS9P82933 396 aaKnown RBP23.57■■□□□ 1.36
SND1-214ENST00000489417 PDIA5Q14554 519 aa23.57■■□□□ 1.36
SND1-214ENST00000489417 IFNL1Q8IU54 200 aa23.57■■□□□ 1.36
SND1-214ENST00000489417 GJA10Q969M2 543 aa23.57■■□□□ 1.36
SND1-214ENST00000489417 ZFP91Q96JP5 570 aaPredicted RBP23.57■■□□□ 1.36
SND1-214ENST00000489417 MMP19Q99542 508 aa23.57■■□□□ 1.36
SND1-214ENST00000489417 CCSER1Q9C0I3 900 aa23.57■■□□□ 1.36
SND1-214ENST00000489417 PCDHA12Q9UN75 941 aa23.57■■□□□ 1.36
SND1-214ENST00000489417 SYCE3A1L190 88 aa23.56■■□□□ 1.36
SND1-214ENST00000489417 CTAGE5O15320 804 aa23.56■■□□□ 1.36
SND1-214ENST00000489417 ITGB5P18084 799 aa23.56■■□□□ 1.36
SND1-214ENST00000489417 UBA7P41226 1012 aa23.56■■□□□ 1.36
SND1-214ENST00000489417 ZNF445P59923 1031 aa23.56■■□□□ 1.36
SND1-214ENST00000489417 WDR78Q5VTH9 848 aa23.56■■□□□ 1.36
SND1-214ENST00000489417 PAXIP1Q6ZW49 1069 aaPredicted RBP23.56■■□□□ 1.36
SND1-214ENST00000489417 PDILTQ8N807 584 aa23.56■■□□□ 1.36
SND1-214ENST00000489417 DNERQ8NFT8 737 aa23.56■■□□□ 1.36
SND1-214ENST00000489417 UIMC1Q96RL1 719 aa23.56■■□□□ 1.36
SND1-214ENST00000489417 PYM1Q9BRP8 204 aaKnown RBP23.56■■□□□ 1.36
SND1-214ENST00000489417 PANK2Q9BZ23 570 aa23.56■■□□□ 1.36
SND1-214ENST00000489417 PORCNQ9H237 461 aa23.56■■□□□ 1.36
SND1-214ENST00000489417 LRWD1Q9UFC0 647 aa23.56■■□□□ 1.36
SND1-214ENST00000489417 ADGRA2Q96PE1 1338 aa23.56■■□□□ 1.36
SND1-214ENST00000489417 LCTP09848 1927 aa23.55■■□□□ 1.36
SND1-214ENST00000489417 A0A087X0B3 334 aa23.55■■□□□ 1.36
SND1-214ENST00000489417 NR3C2P08235 984 aa23.55■■□□□ 1.36
SND1-214ENST00000489417 BCRP11274 1271 aa23.55■■□□□ 1.36
SND1-214ENST00000489417 CDC25AP30304 524 aa23.55■■□□□ 1.36
SND1-214ENST00000489417 CNTN2Q02246 1040 aa23.55■■□□□ 1.36
SND1-214ENST00000489417 KCTD2Q14681 263 aa23.55■■□□□ 1.36
SND1-214ENST00000489417 TAF1CQ15572 869 aaPredicted RBP23.55■■□□□ 1.36
SND1-214ENST00000489417 FAM110CQ1W6H9 321 aa23.55■■□□□ 1.36
SND1-214ENST00000489417 KRBA2Q6ZNG9 492 aa23.55■■□□□ 1.36
SND1-214ENST00000489417 CABP7Q86V35 215 aa23.55■■□□□ 1.36
SND1-214ENST00000489417 VSIG10LQ86VR7 867 aa23.55■■□□□ 1.36
SND1-214ENST00000489417 SDF4Q9BRK5 362 aa23.55■■□□□ 1.36
SND1-214ENST00000489417 EFCC1Q9HA90 598 aa23.55■■□□□ 1.36
SND1-214ENST00000489417 JADE2Q9NQC1 790 aa23.55■■□□□ 1.36
SND1-214ENST00000489417 ARP10275 920 aa23.54■■□□□ 1.36
SND1-214ENST00000489417 FCER1AP12319 257 aa23.54■■□□□ 1.36
SND1-214ENST00000489417 LONRF3Q496Y0 759 aa23.54■■□□□ 1.36
SND1-214ENST00000489417 CYP4F22Q6NT55 531 aa23.54■■□□□ 1.36
SND1-214ENST00000489417 RBM43Q6ZSC3 357 aaKnown RBP23.54■■□□□ 1.36
SND1-214ENST00000489417 FAM133AQ8N9E0 248 aa23.54■■□□□ 1.36
SND1-214ENST00000489417 SLC5A5Q92911 643 aa23.54■■□□□ 1.36
SND1-214ENST00000489417 DHX58Q96C10 678 aa23.54■■□□□ 1.36
SND1-214ENST00000489417 IWS1Q96ST2 819 aa23.54■■□□□ 1.36
SND1-214ENST00000489417 USP25Q9UHP3 1055 aa23.54■■□□□ 1.36
SND1-214ENST00000489417 POTEMA6NI47 508 aa23.53■■□□□ 1.36
SND1-214ENST00000489417 ALDH5A1P51649 535 aaPredicted RBP23.53■■□□□ 1.36
SND1-214ENST00000489417 CNNM3Q8NE01 707 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms