RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 CCDC62Q6P9F0 684 aa10.93□□□□□ -0.66
SNX17-207ENST00000489402 CWC27Q6UX04 472 aaKnown RBP10.93□□□□□ -0.66
SNX17-207ENST00000489402 CHST3Q7LGC8 479 aa10.93□□□□□ -0.66
SNX17-207ENST00000489402 FBXO11Q86XK2 927 aa10.93□□□□□ -0.66
SNX17-207ENST00000489402 ADGRF4Q8IZF3 695 aa10.93□□□□□ -0.66
SNX17-207ENST00000489402 SYTL5Q8TDW5 730 aaPredicted RBP10.93□□□□□ -0.66
SNX17-207ENST00000489402 AFAP1L1Q8TED9 768 aa10.93□□□□□ -0.66
SNX17-207ENST00000489402 AFG1LQ8WV93 481 aa10.93□□□□□ -0.66
SNX17-207ENST00000489402 TAAR1Q96RJ0 339 aa10.93□□□□□ -0.66
SNX17-207ENST00000489402 IWS1Q96ST2 819 aa10.93□□□□□ -0.66
SNX17-207ENST00000489402 ZSCAN10Q96SZ4 725 aaPredicted RBP10.93□□□□□ -0.66
SNX17-207ENST00000489402 UHRF1Q96T88 793 aaPredicted RBP10.93□□□□□ -0.66
SNX17-207ENST00000489402 RMDN3Q96TC7 470 aa10.93□□□□□ -0.66
SNX17-207ENST00000489402 UBAC1Q9BSL1 405 aa10.93□□□□□ -0.66
SNX17-207ENST00000489402 COL20A1Q9P218 1284 aa10.93□□□□□ -0.66
SNX17-207ENST00000489402 TRIP12Q14669 1992 aaPredicted RBP10.92□□□□□ -0.66
SNX17-207ENST00000489402 B4E1Z4 1266 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 PARNO95453 639 aaKnown RBP10.92□□□□□ -0.66
SNX17-207ENST00000489402 ARHGAP1Q07960 439 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 DGKDQ16760 1214 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 LY6KQ17RY6 165 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 TCTN1Q2MV58 587 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 QRICH1Q2TAL8 776 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 SESTD1Q86VW0 696 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 CHD1LQ86WJ1 897 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 HERC6Q8IVU3 1022 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 PLEKHM2Q8IWE5 1019 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 SMC5Q8IY18 1101 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 C7orf31Q8N865 590 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 ANKS1AQ92625 1134 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 DSCC1Q9BVC3 393 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 KATNAL1Q9BW62 490 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 KRT23Q9C075 422 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 CNNM2Q9H8M5 875 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 CTNNA3Q9UI47 895 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 PTPRSQ13332 1948 aa10.92□□□□□ -0.66
SNX17-207ENST00000489402 EPOPA6NHQ4 379 aa10.91□□□□□ -0.66
SNX17-207ENST00000489402 TLL1O43897 1013 aa10.91□□□□□ -0.66
SNX17-207ENST00000489402 CFBP00751 764 aa10.91□□□□□ -0.66
SNX17-207ENST00000489402 SELPP16109 830 aa10.91□□□□□ -0.66
SNX17-207ENST00000489402 POU3F3P20264 500 aaPredicted RBP10.91□□□□□ -0.66
SNX17-207ENST00000489402 KRT40Q6A162 431 aa10.91□□□□□ -0.66
SNX17-207ENST00000489402 TMCO2Q7Z6W1 182 aaPredicted RBP10.91□□□□□ -0.66
SNX17-207ENST00000489402 ENAHQ8N8S7 591 aaPredicted RBP10.91□□□□□ -0.66
SNX17-207ENST00000489402 ARNTL2Q8WYA1 636 aa10.91□□□□□ -0.66
SNX17-207ENST00000489402 CTAGE1Q96RT6 745 aa10.91□□□□□ -0.66
SNX17-207ENST00000489402 ZBED2Q9BTP6 218 aa10.91□□□□□ -0.66
SNX17-207ENST00000489402 AMNQ9BXJ7 453 aa10.91□□□□□ -0.66
SNX17-207ENST00000489402 OSBPL3Q9H4L5 887 aa10.91□□□□□ -0.66
SNX17-207ENST00000489402 CERS4Q9HA82 394 aa10.91□□□□□ -0.66
SNX17-207ENST00000489402 VAT1LQ9HCJ6 419 aa10.91□□□□□ -0.66
SNX17-207ENST00000489402 ZSWIM5Q9P217 1185 aa10.91□□□□□ -0.66
SNX17-207ENST00000489402 RAPGEFL1Q9UHV5 662 aa10.91□□□□□ -0.66
SNX17-207ENST00000489402 MRVI1Q9Y6F6 885 aa10.91□□□□□ -0.66
SNX17-207ENST00000489402 MYH7BA7E2Y1 1941 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 TET1Q8NFU7 2136 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 TTC28Q96AY4 2481 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 EIF3JO75822 258 aaKnown RBP10.9□□□□□ -0.66
SNX17-207ENST00000489402 NR3C2P08235 984 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 EIF2AK2P19525 551 aaKnown RBP10.9□□□□□ -0.66
SNX17-207ENST00000489402 COL9A1P20849 921 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 PSEN2P49810 448 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 NUCB1Q02818 461 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 TAP1Q03518 808 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 LAMC2Q13753 1193 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 GPNMBQ14956 572 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 SLC35G1Q2M3R5 365 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 IFIT1BQ5T764 474 aaKnown RBP10.9□□□□□ -0.66
SNX17-207ENST00000489402 GDF6Q6KF10 455 aaPredicted RBP10.9□□□□□ -0.66
SNX17-207ENST00000489402 CNKSR3Q6P9H4 555 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 LRRC8DQ7L1W4 858 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 EXOC6Q8TAG9 804 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 EMID1Q96A84 441 aaPredicted RBP10.9□□□□□ -0.66
SNX17-207ENST00000489402 ZFP91Q96JP5 570 aaPredicted RBP10.9□□□□□ -0.66
SNX17-207ENST00000489402 ALG1Q9BT22 464 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 JMJD4Q9H9V9 463 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 PXMP2Q9NR77 195 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 GTF2IRD1Q9UHL9 959 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 MTCH2Q9Y6C9 303 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 TAF6LQ9Y6J9 622 aa10.9□□□□□ -0.66
SNX17-207ENST00000489402 COL4A4P53420 1690 aaPredicted RBP10.89□□□□□ -0.67
SNX17-207ENST00000489402 TCF20Q9UGU0 1960 aaKnown RBP10.89□□□□□ -0.67
SNX17-207ENST00000489402 OPLAHO14841 1288 aa10.89□□□□□ -0.67
SNX17-207ENST00000489402 EFCAB14O75071 495 aa10.89□□□□□ -0.67
SNX17-207ENST00000489402 ZNF286BP0CG31 522 aa10.89□□□□□ -0.67
SNX17-207ENST00000489402 WDR5P61964 334 aaKnown RBP10.89□□□□□ -0.67
SNX17-207ENST00000489402 TFF2Q03403 129 aa10.89□□□□□ -0.67
SNX17-207ENST00000489402 RBL2Q08999 1139 aa10.89□□□□□ -0.67
SNX17-207ENST00000489402 TRAF1Q13077 416 aa10.89□□□□□ -0.67
SNX17-207ENST00000489402 MFSD10Q14728 455 aa10.89□□□□□ -0.67
SNX17-207ENST00000489402 KIAA0753Q2KHM9 967 aa10.89□□□□□ -0.67
SNX17-207ENST00000489402 KCNV1Q6PIU1 500 aa10.89□□□□□ -0.67
SNX17-207ENST00000489402 DHX37Q8IY37 1157 aaKnown RBP10.89□□□□□ -0.67
SNX17-207ENST00000489402 STAG2Q8N3U4 1231 aa10.89□□□□□ -0.67
SNX17-207ENST00000489402 PPTC7Q8NI37 304 aa10.89□□□□□ -0.67
SNX17-207ENST00000489402 KAT2BQ92831 832 aa10.89□□□□□ -0.67
SNX17-207ENST00000489402 YTHDC1Q96MU7 727 aaKnown RBP10.89□□□□□ -0.67
SNX17-207ENST00000489402 BCAS3Q9H6U6 928 aa10.89□□□□□ -0.67
SNX17-207ENST00000489402 SENP2Q9HC62 589 aa10.89□□□□□ -0.67
SNX17-207ENST00000489402 MAP3K20Q9NYL2 800 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms